RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 CTSWP56202 376 aa27.31■■□□□ 1.96
TNFRSF10B-202ENST00000347739 LRRC24Q50LG9 513 aa27.31■■□□□ 1.96
TNFRSF10B-202ENST00000347739 LINC00116Q8NCU8 138 aa27.31■■□□□ 1.96
TNFRSF10B-202ENST00000347739 ZNF594Q96JF6 807 aaPredicted RBP27.31■■□□□ 1.96
TNFRSF10B-202ENST00000347739 DIAPH3Q9NSV4 1193 aa27.31■■□□□ 1.96
TNFRSF10B-202ENST00000347739 IFIT5Q13325 482 aaKnown RBP27.3■■□□□ 1.96
TNFRSF10B-202ENST00000347739 PARP10Q53GL7 1025 aa27.3■■□□□ 1.96
TNFRSF10B-202ENST00000347739 TTLL11Q8NHH1 800 aa27.3■■□□□ 1.96
TNFRSF10B-202ENST00000347739 PDE8AO60658 829 aa27.3■■□□□ 1.96
TNFRSF10B-202ENST00000347739 SYNE4Q8N205 404 aa27.3■■□□□ 1.96
TNFRSF10B-202ENST00000347739 DBNDD2Q9BQY9 259 aa27.3■■□□□ 1.96
TNFRSF10B-202ENST00000347739 BOLA2Q9H3K6 86 aa27.3■■□□□ 1.96
TNFRSF10B-202ENST00000347739 LY75O60449 1722 aa27.29■■□□□ 1.96
TNFRSF10B-202ENST00000347739 LAMB2P55268 1798 aa27.29■■□□□ 1.96
TNFRSF10B-202ENST00000347739 K7ELQ4 463 aaPredicted RBP27.29■■□□□ 1.96
TNFRSF10B-202ENST00000347739 RGL2O15211 777 aa27.29■■□□□ 1.96
TNFRSF10B-202ENST00000347739 CD2BP2O95400 341 aaKnown RBP27.29■■□□□ 1.96
TNFRSF10B-202ENST00000347739 SLKQ9H2G2 1235 aaPredicted RBP27.29■■□□□ 1.96
TNFRSF10B-202ENST00000347739 RAD50Q92878 1312 aa27.28■■□□□ 1.96
TNFRSF10B-202ENST00000347739 RFX7Q2KHR2 1363 aa27.28■■□□□ 1.96
TNFRSF10B-202ENST00000347739 CWC27Q6UX04 472 aaKnown RBP27.27■■□□□ 1.96
TNFRSF10B-202ENST00000347739 RC3H1Q5TC82 1133 aaKnown RBP27.27■■□□□ 1.96
TNFRSF10B-202ENST00000347739 CLEC4GQ6UXB4 293 aa27.27■■□□□ 1.96
TNFRSF10B-202ENST00000347739 PTF1AQ7RTS3 328 aa27.27■■□□□ 1.96
TNFRSF10B-202ENST00000347739 PUS3Q9BZE2 481 aaKnown RBP27.27■■□□□ 1.96
TNFRSF10B-202ENST00000347739 ZNF652Q9Y2D9 606 aa27.27■■□□□ 1.96
TNFRSF10B-202ENST00000347739 SCN7AQ01118 1682 aa27.26■■□□□ 1.96
TNFRSF10B-202ENST00000347739 LRP5O75197 1615 aa27.26■■□□□ 1.95
TNFRSF10B-202ENST00000347739 SH3TC1Q8TE82 1336 aa27.26■■□□□ 1.95
TNFRSF10B-202ENST00000347739 NBR1Q14596 966 aa27.26■■□□□ 1.95
TNFRSF10B-202ENST00000347739 IL27Q8NEV9 243 aa27.26■■□□□ 1.95
TNFRSF10B-202ENST00000347739 HAUS7Q99871 368 aa27.26■■□□□ 1.95
TNFRSF10B-202ENST00000347739 LSG1Q9H089 658 aaKnown RBP27.26■■□□□ 1.95
TNFRSF10B-202ENST00000347739 CEP126Q9P2H0 1117 aa27.26■■□□□ 1.95
TNFRSF10B-202ENST00000347739 HSPA4P34932 840 aa27.25■■□□□ 1.95
TNFRSF10B-202ENST00000347739 TAF7LQ5H9L4 462 aa27.25■■□□□ 1.95
TNFRSF10B-202ENST00000347739 SUSD4Q5VX71 490 aa27.25■■□□□ 1.95
TNFRSF10B-202ENST00000347739 GREM2Q9H772 168 aa27.25■■□□□ 1.95
TNFRSF10B-202ENST00000347739 SNRKQ9NRH2 765 aa27.25■■□□□ 1.95
TNFRSF10B-202ENST00000347739 DDX60Q8IY21 1712 aaKnown RBP27.25■■□□□ 1.95
TNFRSF10B-202ENST00000347739 ANKRD18BA2A2Z9 1011 aa27.24■■□□□ 1.95
TNFRSF10B-202ENST00000347739 ST18O60284 1047 aa27.24■■□□□ 1.95
TNFRSF10B-202ENST00000347739 ITGA6P23229 1130 aa27.24■■□□□ 1.95
TNFRSF10B-202ENST00000347739 UTP14AQ9BVJ6 771 aaKnown RBP27.24■■□□□ 1.95
TNFRSF10B-202ENST00000347739 AKAP2Q9Y2D5 859 aa27.24■■□□□ 1.95
TNFRSF10B-202ENST00000347739 KIAA1211Q6ZU35 1233 aa27.24■■□□□ 1.95
TNFRSF10B-202ENST00000347739 SPEF2Q9C093 1822 aa27.23■■□□□ 1.95
TNFRSF10B-202ENST00000347739 HSP90B1P14625 803 aaKnown RBP27.23■■□□□ 1.95
TNFRSF10B-202ENST00000347739 TICAM2Q86XR7 235 aa27.23■■□□□ 1.95
TNFRSF10B-202ENST00000347739 SEPT12Q8IYM1 358 aa27.23■■□□□ 1.95
TNFRSF10B-202ENST00000347739 FSD1Q9BTV5 496 aa27.23■■□□□ 1.95
TNFRSF10B-202ENST00000347739 TAF1LQ8IZX4 1826 aa27.23■■□□□ 1.95
TNFRSF10B-202ENST00000347739 RIC1Q4ADV7 1423 aa27.23■■□□□ 1.95
TNFRSF10B-202ENST00000347739 A0A1B0GUL7 405 aa27.22■■□□□ 1.95
TNFRSF10B-202ENST00000347739 NEUROD6Q96NK8 337 aa27.22■■□□□ 1.95
TNFRSF10B-202ENST00000347739 CCDC85AQ96PX6 553 aaPredicted RBP27.22■■□□□ 1.95
TNFRSF10B-202ENST00000347739 TIMM10P62072 90 aa27.21■■□□□ 1.95
TNFRSF10B-202ENST00000347739 PALD1Q9ULE6 856 aa27.21■■□□□ 1.95
TNFRSF10B-202ENST00000347739 NIP7Q9Y221 180 aaKnown RBP eCLIP27.21■■□□□ 1.95
TNFRSF10B-202ENST00000347739 RIPOR2Q9Y4F9 1068 aa27.21■■□□□ 1.95
TNFRSF10B-202ENST00000347739 NTSR2O95665 410 aa27.21■■□□□ 1.95
TNFRSF10B-202ENST00000347739 DDIT3P35638 169 aa27.21■■□□□ 1.95
TNFRSF10B-202ENST00000347739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.21■■□□□ 1.95
TNFRSF10B-202ENST00000347739 FAM182BQ5T319 152 aa27.2■■□□□ 1.94
TNFRSF10B-202ENST00000347739 SPRYD3Q8NCJ5 442 aa27.2■■□□□ 1.94
TNFRSF10B-202ENST00000347739 NFKBIBQ15653 356 aa27.19■■□□□ 1.94
TNFRSF10B-202ENST00000347739 CHMP5Q9NZZ3 219 aa27.19■■□□□ 1.94
TNFRSF10B-202ENST00000347739 RPS6KA4O75676 772 aa27.19■■□□□ 1.94
TNFRSF10B-202ENST00000347739 NMIQ13287 307 aaPredicted RBP27.19■■□□□ 1.94
TNFRSF10B-202ENST00000347739 LDHAL6AQ6ZMR3 332 aa27.19■■□□□ 1.94
TNFRSF10B-202ENST00000347739 QTRT2Q9H974 415 aaKnown RBP27.19■■□□□ 1.94
TNFRSF10B-202ENST00000347739 CCNL1Q9UK58 526 aaPredicted RBP27.19■■□□□ 1.94
TNFRSF10B-202ENST00000347739 RTL9Q8NET4 1388 aa27.18■■□□□ 1.94
TNFRSF10B-202ENST00000347739 ABCC12Q96J65 1359 aa27.18■■□□□ 1.94
TNFRSF10B-202ENST00000347739 MED23Q9ULK4 1368 aa27.18■■□□□ 1.94
TNFRSF10B-202ENST00000347739 KCNQ4P56696 695 aa27.17■■□□□ 1.94
TNFRSF10B-202ENST00000347739 FAM227BQ96M60 508 aa27.17■■□□□ 1.94
TNFRSF10B-202ENST00000347739 EDC3Q96F86 508 aaKnown RBP27.16■■□□□ 1.94
TNFRSF10B-202ENST00000347739 CIZ1Q9ULV3 898 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF10B-202ENST00000347739 CCDC171Q6TFL3 1326 aa27.16■■□□□ 1.94
TNFRSF10B-202ENST00000347739 MCM2P49736 904 aa27.16■■□□□ 1.94
TNFRSF10B-202ENST00000347739 KBTBD3Q8NAB2 608 aa27.16■■□□□ 1.94
TNFRSF10B-202ENST00000347739 DNAJC2Q99543 621 aaKnown RBP27.16■■□□□ 1.94
TNFRSF10B-202ENST00000347739 A0A0D9SFI3 127 aa27.15■■□□□ 1.94
TNFRSF10B-202ENST00000347739 METTL24Q5JXM2 366 aa27.15■■□□□ 1.94
TNFRSF10B-202ENST00000347739 VGLL2Q8N8G2 317 aa27.15■■□□□ 1.94
TNFRSF10B-202ENST00000347739 BCL11BQ9C0K0 894 aaPredicted RBP27.15■■□□□ 1.94
TNFRSF10B-202ENST00000347739 C4BP0C0L5 1744 aa27.15■■□□□ 1.94
TNFRSF10B-202ENST00000347739 HCLS1P14317 486 aaPredicted RBP27.14■■□□□ 1.94
TNFRSF10B-202ENST00000347739 NEK4P51957 841 aa27.14■■□□□ 1.94
TNFRSF10B-202ENST00000347739 KCNB2Q92953 911 aa27.14■■□□□ 1.94
TNFRSF10B-202ENST00000347739 CNNM1Q9NRU3 951 aa27.14■■□□□ 1.94
TNFRSF10B-202ENST00000347739 PAG1Q9NWQ8 432 aa27.14■■□□□ 1.94
TNFRSF10B-202ENST00000347739 NARFQ9UHQ1 456 aa27.14■■□□□ 1.94
TNFRSF10B-202ENST00000347739 COL24A1Q17RW2 1714 aa27.14■■□□□ 1.93
TNFRSF10B-202ENST00000347739 HSP90AA1P07900 732 aaKnown RBP27.13■■□□□ 1.93
TNFRSF10B-202ENST00000347739 PTH1RQ03431 593 aa27.13■■□□□ 1.93
TNFRSF10B-202ENST00000347739 CCDC158Q5M9N0 1113 aa27.13■■□□□ 1.93
TNFRSF10B-202ENST00000347739 XAGE2Q96GT9 111 aa27.13■■□□□ 1.93
TNFRSF10B-202ENST00000347739 ARAP2Q8WZ64 1704 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms