RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
TRAPPC6B-202ENST00000347691 H3BQV1 296 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 GRM8O00222 908 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 LARP1Q6PKG0 1096 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 MRFAP1L1Q96HT8 127 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 FAM227BQ96M60 508 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 LLPHQ9BRT6 129 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 TPD52L1Q16890 204 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 MRC1P22897 1456 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 KIF2AO00139 706 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 TOB2Q14106 344 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 STX1AQ16623 288 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 ATP2B3Q16720 1220 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-202ENST00000347691 PHRF1Q9P1Y6 1649 aaKnown RBP11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 KCNH5Q8NCM2 988 aa11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 HMGB1P09429 215 aaKnown RBP11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 PA2G4Q9UQ80 394 aaKnown RBP11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 LMTK3Q96Q04 1460 aa11.91□□□□□ -0.5
TRAPPC6B-202ENST00000347691 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 GABPB1Q06547 395 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 NCBP1Q09161 790 aaKnown RBP11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 RESTQ13127 1097 aa11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 EAF2Q96CJ1 260 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 C16orf45Q96MC5 204 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 LGR6Q9HBX8 967 aa11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 SASH1O94885 1247 aa11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 NAA16Q6N069 864 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 USHBP1Q8N6Y0 703 aa11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 TFIP11Q9UBB9 837 aaKnown RBP11.9□□□□□ -0.5
TRAPPC6B-202ENST00000347691 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.51
TRAPPC6B-202ENST00000347691 CCDC73Q6ZRK6 1079 aa11.9□□□□□ -0.51
TRAPPC6B-202ENST00000347691 ZNF396Q96N95 335 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC6B-202ENST00000347691 DNAJC25Q9H1X3 360 aa11.9□□□□□ -0.51
TRAPPC6B-202ENST00000347691 HEG1Q9ULI3 1381 aa11.9□□□□□ -0.51
TRAPPC6B-202ENST00000347691 RNMTO43148 476 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NR1I2O75469 434 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 CEP135Q66GS9 1140 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NAT10Q9H0A0 1025 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 ANO10Q9NW15 660 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NFAT5O94916 1531 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 BECN2A8MW95 431 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 TAF5LO75529 589 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 GSDMDP57764 484 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 BRF1Q92994 677 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 SUCLG2Q96I99 432 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 CCDC8Q9H0W5 538 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
TRAPPC6B-202ENST00000347691 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 FAM173BQ6P4H8 233 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 DDX54Q8TDD1 881 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 PGBD1Q96JS3 809 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 BICC1Q9H694 974 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 DDX21Q9NR30 783 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 ATP5JP18859 108 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.513e-10■■■■□ 20.5
TRAPPC6B-202ENST00000347691 LRMPQ12912 555 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NBPF6Q5VWK0 638 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NBPF4Q96M43 638 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NRDCO43847 1150 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 KINO60870 393 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 ANXA1P04083 346 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 TUBB4AP04350 444 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 STK3Q13188 491 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 LRRC8AQ8IWT6 810 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 RCOR1Q9UKL0 485 aa11.88□□□□□ -0.51
TRAPPC6B-202ENST00000347691 FGD1P98174 961 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 IQCB1Q15051 598 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 PTPN14Q15678 1187 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 CEP57L1Q8IYX8 460 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 CACTINQ8WUQ7 758 aaKnown RBP11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 CTNNA3Q9UI47 895 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 KCNQ3O43525 872 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 FAM193AP78312 1265 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 SMARCC2Q8TAQ2 1214 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 NRBP1Q9UHY1 535 aa11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC6B-202ENST00000347691 PFKFB2O60825 505 aa11.86□□□□□ -0.51
TRAPPC6B-202ENST00000347691 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-202ENST00000347691 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
TRAPPC6B-202ENST00000347691 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms