RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 SPATA31A1Q5TZJ5 1347 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 SUCLG2Q96I99 432 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 JAKMIP1Q96N16 626 aaKnown RBP16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 SH2B1Q9NRF2 756 aaPredicted RBP16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 SDSP20132 328 aa16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 NLGN1Q8N2Q7 840 aa16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 ITGA6P23229 1130 aa16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 PUM3Q15397 648 aaKnown RBP16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 RBM5P52756 815 aaKnown RBP eCLIP16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
CSNK1G3-201ENST00000345990 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 CERS3Q8IU89 383 aa16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 PA2G4Q9UQ80 394 aaKnown RBP16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 USP5P45974 858 aa16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 RRP12Q5JTH9 1297 aaKnown RBP16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 EPB41L2O43491 1005 aaKnown RBP16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 GNAT2P19087 354 aa16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
CSNK1G3-201ENST00000345990 WASF1Q92558 559 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 VPS37CA5D8V6 355 aaPredicted RBP16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 ZNF213O14771 459 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 ADRA2BP18089 450 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 TFCP2Q12800 502 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 SPATA31A5Q5VU36 1347 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 SPATA31A7Q8IWB4 1347 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 HOOK1Q9UJC3 728 aaKnown RBP16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
CSNK1G3-201ENST00000345990 IQSEC2Q5JU85 1478 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 CCDC196A0A1B0GTZ2 297 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 PLCG2P16885 1265 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 CTSWP56202 376 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 TMC4Q7Z404 712 aa16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 ZC3H12CQ9C0D7 883 aaKnown RBP16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 ZNF142P52746 1687 aaPredicted RBP16.19■□□□□ 0.18
CSNK1G3-201ENST00000345990 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 LPIN2Q92539 896 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 COPRSQ9NQ92 184 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 WDR33Q9C0J8 1336 aaKnown RBP16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 ESYT1Q9BSJ8 1104 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 CEMIPQ8WUJ3 1361 aa16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 COL3A1P02461 1466 aaPredicted RBP16.18■□□□□ 0.18
CSNK1G3-201ENST00000345990 HSPA1LP34931 641 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 PDE6BP35913 854 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 DDX49Q9Y6V7 483 aaKnown RBP16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 SLC4A3P48751 1232 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 RAD21O60216 631 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 RPS6KA4O75676 772 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 CIAO1O76071 339 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 IQCA1Q86XH1 822 aa16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 ZNF396Q96N95 335 aaPredicted RBP16.17■□□□□ 0.18
CSNK1G3-201ENST00000345990 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
CSNK1G3-201ENST00000345990 HDAC9Q9UKV0 1011 aa16.16■□□□□ 0.18
CSNK1G3-201ENST00000345990 FMN2Q9NZ56 1722 aa16.16■□□□□ 0.18
CSNK1G3-201ENST00000345990 MYOM1P52179 1685 aa16.16■□□□□ 0.18
CSNK1G3-201ENST00000345990 RNF113AO15541 343 aaKnown RBP16.16■□□□□ 0.18
CSNK1G3-201ENST00000345990 A0A1B0GUL7 405 aa16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 TBC1D32Q96NH3 1257 aa16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 CCDC47Q96A33 483 aaKnown RBP16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 HELLSQ9NRZ9 838 aa16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 ZSCAN29Q8IWY8 852 aaPredicted RBP16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 SNRKQ9NRH2 765 aa16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 H0YIN7 160 aa16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 PDE4BQ07343 736 aa16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
CSNK1G3-201ENST00000345990 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 PNMA6EA0A0J9YXQ4 647 aa16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 NAA16Q6N069 864 aaPredicted RBP16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 TICAM2Q86XR7 235 aa16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 MKNK2Q9HBH9 465 aa16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 NSFL1CQ9UNZ2 370 aaKnown RBP16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 ATP10DQ9P241 1426 aa16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 RPS8P62241 208 aaKnown RBP16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 PLCB2Q00722 1185 aa16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 JMYQ8N9B5 988 aa16.14■□□□□ 0.17
CSNK1G3-201ENST00000345990 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms