RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 GRAPLQ8TC17 118 aaPredicted RBP23.41■■□□□ 1.34
SLX1A-202ENST00000345535 HHIPL1Q96JK4 782 aa23.41■■□□□ 1.34
SLX1A-202ENST00000345535 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
SLX1A-202ENST00000345535 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
SLX1A-202ENST00000345535 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
SLX1A-202ENST00000345535 TRAF5O00463 557 aa23.39■■□□□ 1.33
SLX1A-202ENST00000345535 GMPSP49915 693 aaPredicted RBP23.39■■□□□ 1.33
SLX1A-202ENST00000345535 GRM1Q13255 1194 aa23.39■■□□□ 1.33
SLX1A-202ENST00000345535 PROSER3Q2NL68 480 aa23.39■■□□□ 1.33
SLX1A-202ENST00000345535 CST9Q5W186 159 aa23.39■■□□□ 1.33
SLX1A-202ENST00000345535 CYP4F22Q6NT55 531 aa23.39■■□□□ 1.33
SLX1A-202ENST00000345535 THSD7BQ9C0I4 1608 aa23.39■■□□□ 1.33
SLX1A-202ENST00000345535 ANKRD36CQ5JPF3 1778 aa23.39■■□□□ 1.33
SLX1A-202ENST00000345535 CELF2O95319 508 aaKnown RBP23.38■■□□□ 1.33
SLX1A-202ENST00000345535 HCLS1P14317 486 aaPredicted RBP23.38■■□□□ 1.33
SLX1A-202ENST00000345535 ABHD8Q96I13 439 aa23.38■■□□□ 1.33
SLX1A-202ENST00000345535 H7C1D1 291 aa23.37■■□□□ 1.33
SLX1A-202ENST00000345535 ANXA1P04083 346 aa23.37■■□□□ 1.33
SLX1A-202ENST00000345535 CDC37L1Q7L3B6 337 aa23.37■■□□□ 1.33
SLX1A-202ENST00000345535 PGAP2Q9UHJ9 254 aa23.37■■□□□ 1.33
SLX1A-202ENST00000345535 HOXB7P09629 217 aa23.36■■□□□ 1.33
SLX1A-202ENST00000345535 SAPCD2Q86UD0 394 aa23.36■■□□□ 1.33
SLX1A-202ENST00000345535 RAD17O75943 681 aa23.35■■□□□ 1.33
SLX1A-202ENST00000345535 NECTIN2Q92692 538 aa23.35■■□□□ 1.33
SLX1A-202ENST00000345535 FMR1Q06787 632 aaKnown RBP eCLIP23.34■■□□□ 1.33
SLX1A-202ENST00000345535 CHL1O00533 1208 aa23.33■■□□□ 1.33
SLX1A-202ENST00000345535 HSP90B1P14625 803 aaKnown RBP23.33■■□□□ 1.33
SLX1A-202ENST00000345535 PLBD2Q8NHP8 589 aa23.33■■□□□ 1.33
SLX1A-202ENST00000345535 DPF2Q92785 391 aa23.33■■□□□ 1.33
SLX1A-202ENST00000345535 DBF4Q9UBU7 674 aaPredicted RBP23.33■■□□□ 1.33
SLX1A-202ENST00000345535 CNOT7Q9UIV1 285 aaKnown RBP23.33■■□□□ 1.33
SLX1A-202ENST00000345535 LAMB2P55268 1798 aa23.32■■□□□ 1.32
SLX1A-202ENST00000345535 BRPF1P55201 1214 aaPredicted RBP23.32■■□□□ 1.32
SLX1A-202ENST00000345535 WASHC4Q2M389 1173 aa23.32■■□□□ 1.32
SLX1A-202ENST00000345535 HDGFL1Q5TGJ6 251 aa23.32■■□□□ 1.32
SLX1A-202ENST00000345535 ANKRD13DQ6ZTN6 518 aa23.32■■□□□ 1.32
SLX1A-202ENST00000345535 SLC51AQ86UW1 340 aa23.32■■□□□ 1.32
SLX1A-202ENST00000345535 GLIS2Q9BZE0 524 aaPredicted RBP23.32■■□□□ 1.32
SLX1A-202ENST00000345535 EYA3Q99504 573 aa23.31■■□□□ 1.32
SLX1A-202ENST00000345535 RPS12P25398 132 aaKnown RBP23.3■■□□□ 1.32
SLX1A-202ENST00000345535 NOGQ13253 232 aa23.3■■□□□ 1.32
SLX1A-202ENST00000345535 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
SLX1A-202ENST00000345535 SF3B3Q15393 1217 aaKnown RBP23.3■■□□□ 1.32
SLX1A-202ENST00000345535 RUNDC1Q96C34 613 aa23.3■■□□□ 1.32
SLX1A-202ENST00000345535 ZNF408Q9H9D4 720 aa23.3■■□□□ 1.32
SLX1A-202ENST00000345535 HYPKQ9NX55 129 aa23.3■■□□□ 1.32
SLX1A-202ENST00000345535 CHPF2Q9P2E5 772 aa23.3■■□□□ 1.32
SLX1A-202ENST00000345535 LAS1LQ9Y4W2 734 aaKnown RBP23.3■■□□□ 1.32
SLX1A-202ENST00000345535 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
SLX1A-202ENST00000345535 NSFL1CQ9UNZ2 370 aaKnown RBP23.29■■□□□ 1.32
SLX1A-202ENST00000345535 AOC2O75106 756 aa23.28■■□□□ 1.32
SLX1A-202ENST00000345535 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
SLX1A-202ENST00000345535 MYBBP1AQ9BQG0 1328 aaKnown RBP23.28■■□□□ 1.32
SLX1A-202ENST00000345535 C6orf229H3BNL8 230 aa23.27■■□□□ 1.32
SLX1A-202ENST00000345535 HIRAP54198 1017 aaPredicted RBP23.27■■□□□ 1.32
SLX1A-202ENST00000345535 TRPM4Q8TD43 1214 aa23.27■■□□□ 1.32
SLX1A-202ENST00000345535 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
SLX1A-202ENST00000345535 LRRC37AA6NMS7 1700 aa23.27■■□□□ 1.32
SLX1A-202ENST00000345535 YDJCA8MPS7 323 aa23.26■■□□□ 1.31
SLX1A-202ENST00000345535 TRIM28Q13263 835 aaKnown RBP23.26■■□□□ 1.31
SLX1A-202ENST00000345535 FAM89AQ96GI7 184 aa23.26■■□□□ 1.31
SLX1A-202ENST00000345535 CHMP4AQ9BY43 222 aa23.26■■□□□ 1.31
SLX1A-202ENST00000345535 CCDC85CA6NKD9 419 aa23.25■■□□□ 1.31
SLX1A-202ENST00000345535 PSMD14O00487 310 aa23.24■■□□□ 1.31
SLX1A-202ENST00000345535 HUNKP57058 714 aa23.24■■□□□ 1.31
SLX1A-202ENST00000345535 KRT26Q7Z3Y9 468 aa23.24■■□□□ 1.31
SLX1A-202ENST00000345535 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
SLX1A-202ENST00000345535 DCPSQ96C86 337 aaKnown RBP23.24■■□□□ 1.31
SLX1A-202ENST00000345535 CFAP44Q96MT7 982 aa23.24■■□□□ 1.31
SLX1A-202ENST00000345535 DUOX1Q9NRD9 1551 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 G3V3G9 751 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 RPS8P62241 208 aaKnown RBP23.23■■□□□ 1.31
SLX1A-202ENST00000345535 GOLGA2Q08379 1002 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 KRT24Q2M2I5 525 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 DCAF8Q5TAQ9 597 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 USP48Q86UV5 1035 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 C2orf69Q8N8R5 385 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 CELF1Q92879 486 aaKnown RBP23.23■■□□□ 1.31
SLX1A-202ENST00000345535 ZC3H12CQ9C0D7 883 aaKnown RBP23.23■■□□□ 1.31
SLX1A-202ENST00000345535 DBNDD1Q9H9R9 158 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
SLX1A-202ENST00000345535 ATP5J2-PTCD1G3V325 749 aa23.22■■□□□ 1.31
SLX1A-202ENST00000345535 IRS4O14654 1257 aaPredicted RBP23.22■■□□□ 1.31
SLX1A-202ENST00000345535 MLLT1Q03111 559 aaPredicted RBP23.22■■□□□ 1.31
SLX1A-202ENST00000345535 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
SLX1A-202ENST00000345535 CCDC102AQ96A19 550 aa23.22■■□□□ 1.31
SLX1A-202ENST00000345535 ZBTB12Q9Y330 459 aaPredicted RBP23.22■■□□□ 1.31
SLX1A-202ENST00000345535 DDX60Q8IY21 1712 aaKnown RBP23.22■■□□□ 1.31
SLX1A-202ENST00000345535 RIMBP2O15034 1052 aa23.21■■□□□ 1.31
SLX1A-202ENST00000345535 ECE2O60344 883 aa23.21■■□□□ 1.31
SLX1A-202ENST00000345535 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
SLX1A-202ENST00000345535 RIC3Q7Z5B4 369 aa23.21■■□□□ 1.31
SLX1A-202ENST00000345535 TSKSQ9UJT2 592 aa23.21■■□□□ 1.31
SLX1A-202ENST00000345535 TAF1P21675 1872 aa23.21■■□□□ 1.31
SLX1A-202ENST00000345535 GPSM2P81274 684 aa23.2■■□□□ 1.3
SLX1A-202ENST00000345535 TBC1D10BQ4KMP7 808 aaPredicted RBP23.2■■□□□ 1.3
SLX1A-202ENST00000345535 DUSP27Q5VZP5 1158 aa23.2■■□□□ 1.3
SLX1A-202ENST00000345535 ZBTB38Q8NAP3 1195 aaPredicted RBP23.2■■□□□ 1.3
SLX1A-202ENST00000345535 GBA2Q9HCG7 927 aaPredicted RBP23.2■■□□□ 1.3
SLX1A-202ENST00000345535 POLLQ9UGP5 575 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms