RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DPEP1P16444 411 aa14.94□□□□□ -0.02
SNCA-202ENST00000345009 CLCN6P51797 869 aa14.94□□□□□ -0.02
SNCA-202ENST00000345009 FTSJ3Q8IY81 847 aaKnown RBP14.94□□□□□ -0.02
SNCA-202ENST00000345009 MASTLQ96GX5 879 aa14.94□□□□□ -0.02
SNCA-202ENST00000345009 KLRG2A4D1S0 409 aaPredicted RBP14.93□□□□□ -0.02
SNCA-202ENST00000345009 HCLS1P14317 486 aaPredicted RBP14.93□□□□□ -0.02
SNCA-202ENST00000345009 NPR1P16066 1061 aa14.93□□□□□ -0.02
SNCA-202ENST00000345009 ALDH1B1P30837 517 aa14.93□□□□□ -0.02
SNCA-202ENST00000345009 RTL5Q5HYW3 569 aaPredicted RBP14.93□□□□□ -0.02
SNCA-202ENST00000345009 NLGN2Q8NFZ4 835 aa14.93□□□□□ -0.02
SNCA-202ENST00000345009 CNKSR1Q969H4 720 aa14.93□□□□□ -0.02
SNCA-202ENST00000345009 ZNF622Q969S3 477 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNCA-202ENST00000345009 ARFGEF2Q9Y6D5 1785 aa14.93□□□□□ -0.02
SNCA-202ENST00000345009 AFDNP55196 1824 aaKnown RBP14.92□□□□□ -0.02
SNCA-202ENST00000345009 H7C1W4 665 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 GRM8O00222 908 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 PDE8AO60658 829 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 SRGNP10124 158 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 GPR162Q16538 588 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
SNCA-202ENST00000345009 STYK1Q6J9G0 422 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 UBE3BQ7Z3V4 1068 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 TTLL6Q8N841 843 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 RBM17Q96I25 401 aaKnown RBP14.92□□□□□ -0.02
SNCA-202ENST00000345009 NRXN2Q9P2S2 1712 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 RIC1Q4ADV7 1423 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
SNCA-202ENST00000345009 TRIM27P14373 513 aa14.91□□□□□ -0.02
SNCA-202ENST00000345009 CHRNA5P30532 468 aa14.91□□□□□ -0.02
SNCA-202ENST00000345009 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
SNCA-202ENST00000345009 TMX4Q9H1E5 349 aaPredicted RBP14.91□□□□□ -0.02
SNCA-202ENST00000345009 ANKRD36CQ5JPF3 1778 aa14.9□□□□□ -0.02
SNCA-202ENST00000345009 GRIN3BO60391 1043 aa14.9□□□□□ -0.02
SNCA-202ENST00000345009 CRY2Q49AN0 593 aa14.9□□□□□ -0.02
SNCA-202ENST00000345009 CCDC152Q4G0S7 254 aa14.9□□□□□ -0.02
SNCA-202ENST00000345009 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
SNCA-202ENST00000345009 DDX46Q7L014 1031 aaKnown RBP14.9□□□□□ -0.02
SNCA-202ENST00000345009 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
SNCA-202ENST00000345009 SYNE4Q8N205 404 aa14.9□□□□□ -0.02
SNCA-202ENST00000345009 CLUAP1Q96AJ1 413 aa14.9□□□□□ -0.02
SNCA-202ENST00000345009 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
SNCA-202ENST00000345009 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
SNCA-202ENST00000345009 ABCC12Q96J65 1359 aa14.89□□□□□ -0.03
SNCA-202ENST00000345009 KCNA3P22001 575 aa14.89□□□□□ -0.03
SNCA-202ENST00000345009 HOXA10P31260 410 aaPredicted RBP14.89□□□□□ -0.03
SNCA-202ENST00000345009 SF3B3Q15393 1217 aaKnown RBP14.89□□□□□ -0.03
SNCA-202ENST00000345009 BCS1LQ9Y276 419 aa14.89□□□□□ -0.03
SNCA-202ENST00000345009 ABCC4O15439 1325 aa14.89□□□□□ -0.03
SNCA-202ENST00000345009 KIF13BQ9NQT8 1826 aa14.88□□□□□ -0.03
SNCA-202ENST00000345009 GSE1Q14687 1217 aa14.88□□□□□ -0.03
SNCA-202ENST00000345009 JARID2Q92833 1246 aaPredicted RBP14.88□□□□□ -0.03
SNCA-202ENST00000345009 CRAMP1Q96RY5 1269 aa14.88□□□□□ -0.03
SNCA-202ENST00000345009 PLA2G12BQ9BX93 195 aa14.88□□□□□ -0.03
SNCA-202ENST00000345009 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
SNCA-202ENST00000345009 BBOX1O75936 387 aa14.87□□□□□ -0.03
SNCA-202ENST00000345009 GNAI3P08754 354 aa14.87□□□□□ -0.03
SNCA-202ENST00000345009 SOGA3Q5TF21 947 aa14.87□□□□□ -0.03
SNCA-202ENST00000345009 USP44Q9H0E7 712 aa14.87□□□□□ -0.03
SNCA-202ENST00000345009 GOLGB1Q14789 3259 aaKnown RBP14.86□□□□□ -0.03
SNCA-202ENST00000345009 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
SNCA-202ENST00000345009 UBTFL1P0CB47 393 aaPredicted RBP14.86□□□□□ -0.03
SNCA-202ENST00000345009 CASP7P55210 303 aa14.86□□□□□ -0.03
SNCA-202ENST00000345009 CTSWP56202 376 aa14.86□□□□□ -0.03
SNCA-202ENST00000345009 PDE3AQ14432 1141 aa14.86□□□□□ -0.03
SNCA-202ENST00000345009 TMC4Q7Z404 712 aa14.86□□□□□ -0.03
SNCA-202ENST00000345009 UTYO14607 1347 aa14.86□□□□□ -0.03
SNCA-202ENST00000345009 NBPF7P0C2Y1 421 aaPredicted RBP14.85□□□□□ -0.03
SNCA-202ENST00000345009 GRIPAP1Q4V328 841 aa14.85□□□□□ -0.03
SNCA-202ENST00000345009 CC2D2BQ6DHV5 1058 aa14.85□□□□□ -0.03
SNCA-202ENST00000345009 PRPF40BQ6NWY9 871 aaKnown RBP14.85□□□□□ -0.03
SNCA-202ENST00000345009 C3orf67Q6ZVT6 689 aa14.85□□□□□ -0.03
SNCA-202ENST00000345009 ITPRIPQ8IWB1 547 aa14.85□□□□□ -0.03
SNCA-202ENST00000345009 TTLL11Q8NHH1 800 aa14.85□□□□□ -0.03
SNCA-202ENST00000345009 CDC5LQ99459 802 aaKnown RBP14.85□□□□□ -0.03
SNCA-202ENST00000345009 WWC3Q9ULE0 1092 aa14.85□□□□□ -0.03
SNCA-202ENST00000345009 GRAPQ13588 217 aa14.84□□□□□ -0.03
SNCA-202ENST00000345009 TMEM57Q8N5G2 664 aa14.84□□□□□ -0.03
SNCA-202ENST00000345009 GRAPLQ8TC17 118 aaPredicted RBP14.84□□□□□ -0.03
SNCA-202ENST00000345009 CSF1RP07333 972 aa14.83□□□□□ -0.04
SNCA-202ENST00000345009 RPS8P62241 208 aaKnown RBP14.83□□□□□ -0.04
SNCA-202ENST00000345009 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
SNCA-202ENST00000345009 CCDC57Q2TAC2 916 aa14.83□□□□□ -0.04
SNCA-202ENST00000345009 KIF12Q96FN5 646 aa14.83□□□□□ -0.04
SNCA-202ENST00000345009 MS4A3Q96HJ5 214 aa14.83□□□□□ -0.04
SNCA-202ENST00000345009 DCBLD2Q96PD2 775 aa14.83□□□□□ -0.04
SNCA-202ENST00000345009 CHMP3Q9Y3E7 222 aa14.83□□□□□ -0.04
SNCA-202ENST00000345009 ANKRD31Q8N7Z5 1873 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 ANKRD18BA2A2Z9 1011 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 PPEF1O14829 653 aaPredicted RBP14.82□□□□□ -0.04
SNCA-202ENST00000345009 MAP3K13O43283 966 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 C21orf2O43822 256 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 PLIN1O60240 522 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 PYGBP11216 843 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 LMBR1LQ6UX01 489 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 ARHGAP27Q6ZUM4 889 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 ANKRD18AQ8IVF6 992 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 RTKN2Q8IZC4 609 aa14.82□□□□□ -0.04
SNCA-202ENST00000345009 CCDC85AQ96PX6 553 aaPredicted RBP14.82□□□□□ -0.04
SNCA-202ENST00000345009 N4BP2Q86UW6 1770 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms