RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 CASP7P55210 303 aa26.25■■□□□ 1.79
SMARCB1-202ENST00000344921 TNNQ9UQP3 1299 aa26.25■■□□□ 1.79
SMARCB1-202ENST00000344921 CTSWP56202 376 aa26.25■■□□□ 1.79
SMARCB1-202ENST00000344921 FTSJ3Q8IY81 847 aaKnown RBP26.25■■□□□ 1.79
SMARCB1-202ENST00000344921 NBPF7P0C2Y1 421 aaPredicted RBP26.24■■□□□ 1.79
SMARCB1-202ENST00000344921 ABCC4O15439 1325 aa26.24■■□□□ 1.79
SMARCB1-202ENST00000344921 TTLL11Q8NHH1 800 aa26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 PLA2G12BQ9BX93 195 aa26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 MYH3P11055 1940 aa26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 PPEF1O14829 653 aaPredicted RBP26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 GRAPQ13588 217 aa26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 GRAPLQ8TC17 118 aaPredicted RBP26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 USP44Q9H0E7 712 aa26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 TMX4Q9H1E5 349 aaPredicted RBP26.22■■□□□ 1.79
SMARCB1-202ENST00000344921 SOGA3Q5TF21 947 aa26.21■■□□□ 1.79
SMARCB1-202ENST00000344921 INTS3Q68E01 1043 aaKnown RBP26.21■■□□□ 1.79
SMARCB1-202ENST00000344921 BBOX1O75936 387 aa26.2■■□□□ 1.79
SMARCB1-202ENST00000344921 DZIP1LQ8IYY4 767 aaKnown RBP26.2■■□□□ 1.79
SMARCB1-202ENST00000344921 SEC31BQ9NQW1 1179 aa26.2■■□□□ 1.79
SMARCB1-202ENST00000344921 CHMP3Q9Y3E7 222 aa26.2■■□□□ 1.79
SMARCB1-202ENST00000344921 TAF1P21675 1872 aa26.2■■□□□ 1.78
SMARCB1-202ENST00000344921 UTYO14607 1347 aa26.19■■□□□ 1.78
SMARCB1-202ENST00000344921 CELF1Q92879 486 aaKnown RBP26.19■■□□□ 1.78
SMARCB1-202ENST00000344921 GREM2Q9H772 168 aa26.19■■□□□ 1.78
SMARCB1-202ENST00000344921 OLFM4Q6UX06 510 aa26.18■■□□□ 1.78
SMARCB1-202ENST00000344921 TMEM57Q8N5G2 664 aa26.18■■□□□ 1.78
SMARCB1-202ENST00000344921 SUCLG2Q96I99 432 aa26.18■■□□□ 1.78
SMARCB1-202ENST00000344921 PLIN1O60240 522 aa26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 FOXO4P98177 505 aa26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 CCDC93Q567U6 631 aa26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 C7orf43Q8WVR3 580 aa26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 UBTFL1P0CB47 393 aaPredicted RBP26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 RPS8P62241 208 aaKnown RBP26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 LMBR1LQ6UX01 489 aa26.17■■□□□ 1.78
SMARCB1-202ENST00000344921 CSF1RP07333 972 aa26.16■■□□□ 1.78
SMARCB1-202ENST00000344921 MS4A1P11836 297 aa26.16■■□□□ 1.78
SMARCB1-202ENST00000344921 EPHA10Q5JZY3 1008 aa26.16■■□□□ 1.78
SMARCB1-202ENST00000344921 CDC5LQ99459 802 aaKnown RBP26.16■■□□□ 1.78
SMARCB1-202ENST00000344921 FAM161AQ3B820 660 aa26.15■■□□□ 1.78
SMARCB1-202ENST00000344921 ANKRD18AQ8IVF6 992 aa26.15■■□□□ 1.78
SMARCB1-202ENST00000344921 ATP6V0A2Q9Y487 856 aa26.15■■□□□ 1.78
SMARCB1-202ENST00000344921 ITGA6P23229 1130 aa26.14■■□□□ 1.78
SMARCB1-202ENST00000344921 CC2D2BQ6DHV5 1058 aa26.14■■□□□ 1.78
SMARCB1-202ENST00000344921 TMC4Q7Z404 712 aa26.14■■□□□ 1.78
SMARCB1-202ENST00000344921 ITPRIPQ8IWB1 547 aa26.14■■□□□ 1.78
SMARCB1-202ENST00000344921 RTKN2Q8IZC4 609 aa26.14■■□□□ 1.78
SMARCB1-202ENST00000344921 MEIS3Q99687 375 aa26.14■■□□□ 1.78
SMARCB1-202ENST00000344921 RASSF7Q02833 373 aa26.14■■□□□ 1.77
SMARCB1-202ENST00000344921 BICC1Q9H694 974 aaKnown RBP26.14■■□□□ 1.77
SMARCB1-202ENST00000344921 HDAC5Q9UQL6 1122 aa26.14■■□□□ 1.77
SMARCB1-202ENST00000344921 RLBP1P12271 317 aa26.13■■□□□ 1.77
SMARCB1-202ENST00000344921 IFIT5Q13325 482 aaKnown RBP26.13■■□□□ 1.77
SMARCB1-202ENST00000344921 SP8Q8IXZ3 490 aa26.13■■□□□ 1.77
SMARCB1-202ENST00000344921 PANK1Q8TE04 598 aa26.13■■□□□ 1.77
SMARCB1-202ENST00000344921 KAZALD1Q96I82 304 aa26.13■■□□□ 1.77
SMARCB1-202ENST00000344921 ANKRD18BA2A2Z9 1011 aa26.12■■□□□ 1.77
SMARCB1-202ENST00000344921 GNAI3P08754 354 aa26.12■■□□□ 1.77
SMARCB1-202ENST00000344921 TAOK3Q9H2K8 898 aa26.12■■□□□ 1.77
SMARCB1-202ENST00000344921 RTL9Q8NET4 1388 aa26.12■■□□□ 1.77
SMARCB1-202ENST00000344921 CHD4Q14839 1912 aa26.12■■□□□ 1.77
SMARCB1-202ENST00000344921 CCDC57Q2TAC2 916 aa26.11■■□□□ 1.77
SMARCB1-202ENST00000344921 SLC51AQ86UW1 340 aa26.11■■□□□ 1.77
SMARCB1-202ENST00000344921 NFKBIEO00221 500 aa26.11■■□□□ 1.77
SMARCB1-202ENST00000344921 IGHMBP2P38935 993 aaKnown RBP26.11■■□□□ 1.77
SMARCB1-202ENST00000344921 FER1L6Q2WGJ9 1857 aa26.1■■□□□ 1.77
SMARCB1-202ENST00000344921 GRIPAP1Q4V328 841 aa26.1■■□□□ 1.77
SMARCB1-202ENST00000344921 COL4A1P02462 1669 aa26.09■■□□□ 1.77
SMARCB1-202ENST00000344921 TAF7LQ5H9L4 462 aa26.09■■□□□ 1.77
SMARCB1-202ENST00000344921 MPHOSPH8Q99549 860 aa26.09■■□□□ 1.77
SMARCB1-202ENST00000344921 LRRFIP2Q9Y608 721 aaKnown RBP26.09■■□□□ 1.77
SMARCB1-202ENST00000344921 FKBP4Q02790 459 aaKnown RBP eCLIP26.08■■□□□ 1.77
SMARCB1-202ENST00000344921 MPNDQ8N594 471 aa26.08■■□□□ 1.76
SMARCB1-202ENST00000344921 LMNB1P20700 586 aa26.07■■□□□ 1.76
SMARCB1-202ENST00000344921 RABL6Q3YEC7 729 aaPredicted RBP26.07■■□□□ 1.76
SMARCB1-202ENST00000344921 DPP8Q6V1X1 898 aaPredicted RBP26.07■■□□□ 1.76
SMARCB1-202ENST00000344921 ANKRD44Q8N8A2 993 aa26.07■■□□□ 1.76
SMARCB1-202ENST00000344921 RNF181Q9P0P0 153 aa26.07■■□□□ 1.76
SMARCB1-202ENST00000344921 NSFL1CQ9UNZ2 370 aaKnown RBP26.07■■□□□ 1.76
SMARCB1-202ENST00000344921 C9orf131Q5VYM1 1079 aa26.06■■□□□ 1.76
SMARCB1-202ENST00000344921 BSDC1Q9NW68 430 aaPredicted RBP26.06■■□□□ 1.76
SMARCB1-202ENST00000344921 SPEF2Q9C093 1822 aa26.06■■□□□ 1.76
SMARCB1-202ENST00000344921 ANKIB1Q9P2G1 1089 aa26.05■■□□□ 1.76
SMARCB1-202ENST00000344921 LTBP3Q9NS15 1303 aa26.05■■□□□ 1.76
SMARCB1-202ENST00000344921 GNAI2P04899 355 aa26.05■■□□□ 1.76
SMARCB1-202ENST00000344921 ZNF594Q96JF6 807 aaPredicted RBP26.05■■□□□ 1.76
SMARCB1-202ENST00000344921 PSMD1Q99460 953 aa26.05■■□□□ 1.76
SMARCB1-202ENST00000344921 ZNF277Q9NRM2 450 aaPredicted RBP26.05■■□□□ 1.76
SMARCB1-202ENST00000344921 COG6Q9Y2V7 657 aa26.05■■□□□ 1.76
SMARCB1-202ENST00000344921 CCDC88AQ3V6T2 1871 aa26.04■■□□□ 1.76
SMARCB1-202ENST00000344921 YY1P25490 414 aa26.04■■□□□ 1.76
SMARCB1-202ENST00000344921 SBF1O95248 1867 aa26.04■■□□□ 1.76
SMARCB1-202ENST00000344921 PDE3AQ14432 1141 aa26.03■■□□□ 1.76
SMARCB1-202ENST00000344921 GPSM2P81274 684 aa26.02■■□□□ 1.76
SMARCB1-202ENST00000344921 MVPQ14764 893 aaKnown RBP26.02■■□□□ 1.76
SMARCB1-202ENST00000344921 C20orf194Q5TEA3 1177 aa26.02■■□□□ 1.76
SMARCB1-202ENST00000344921 LDHAL6AQ6ZMR3 332 aa26.02■■□□□ 1.76
SMARCB1-202ENST00000344921 SUPT20HQ8NEM7 779 aa26.02■■□□□ 1.76
SMARCB1-202ENST00000344921 LRRC37AA6NMS7 1700 aa26.02■■□□□ 1.76
SMARCB1-202ENST00000344921 ZBTB7BO15156 539 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms