RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 RUFY3Q7L099 469 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 GTF3C6Q969F1 213 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 KIF1BPQ96EK5 621 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 KIF2CQ99661 725 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 SMG6Q86US8 1419 aaKnown RBP7.49□□□□□ -1.21
PCDH18-201ENST00000344876 ZNF213O14771 459 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 RHOXF2BP0C7M4 288 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 ZC3H6P61129 1189 aaKnown RBP7.49□□□□□ -1.21
PCDH18-201ENST00000344876 SATB1Q01826 763 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 CRACR2BQ8N4Y2 399 aaPredicted RBP7.49□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC114Q96M63 670 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 RHOXF2Q9BQY4 288 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 RAD54L2Q9Y4B4 1467 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC194A0A1B0GVG4 234 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 FRMD3A2A2Y4 597 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 TMEM110-MUSTN1A8MSY1 372 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 AKR1B10O60218 316 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 TMPOP42166 694 aaKnown RBP7.49□□□□□ -1.21
PCDH18-201ENST00000344876 TAF7Q15545 349 aaPredicted RBP7.49□□□□□ -1.21
PCDH18-201ENST00000344876 C6orf163Q5TEZ5 329 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 TBC1D9Q6ZT07 1266 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 EFCC1Q9HA90 598 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 GLRX3O76003 335 aaKnown RBP7.49□□□□□ -1.21
PCDH18-201ENST00000344876 PSMC4P43686 418 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 GSDMDP57764 484 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 CTCFLQ8NI51 663 aaPredicted RBP7.49□□□□□ -1.21
PCDH18-201ENST00000344876 ARFGAP3Q9NP61 516 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 USP16Q9Y5T5 823 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 TLDC2A0PJX2 215 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC172P0C7W6 258 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 IGHMBP2P38935 993 aaKnown RBP7.48□□□□□ -1.21
PCDH18-201ENST00000344876 KIAA0753Q2KHM9 967 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 NAA16Q6N069 864 aaPredicted RBP7.48□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC174Q6PII3 467 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 TRIM21P19474 475 aaKnown RBP7.48□□□□□ -1.21
PCDH18-201ENST00000344876 DIXDC1Q155Q3 683 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 ZNF365Q70YC5 407 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 DNAJC25Q9H1X3 360 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
PCDH18-201ENST00000344876 GPRASP1Q5JY77 1395 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 DDX19AQ9NUU7 478 aaKnown RBP7.48□□□□□ -1.21
PCDH18-201ENST00000344876 IKBKGQ9Y6K9 419 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 IGHDP01880 384 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 RLBP1P12271 317 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 FERP16591 822 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 HSP90AA5PQ58FG0 334 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 AOPEPQ8N6M6 819 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 TRIM47Q96LD4 638 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 SLC26A6Q9BXS9 759 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 U2AF2P26368 475 aaKnown RBP eCLIP7.48□□□□□ -1.21
PCDH18-201ENST00000344876 MARCKSP29966 332 aaPredicted RBP7.48□□□□□ -1.21
PCDH18-201ENST00000344876 IFT81Q8WYA0 676 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 FERMT2Q96AC1 680 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 LZTFL1Q9NQ48 299 aa7.48□□□□□ -1.21
PCDH18-201ENST00000344876 ANKRD18BA2A2Z9 1011 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 KRT13P13646 458 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 PEX19P40855 299 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 DEUP1Q05D60 604 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 CFAP58Q5T655 872 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 SYCP3Q8IZU3 236 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 AFAP1Q8N556 730 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC63Q8NA47 563 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 NBPF3Q9H094 633 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 TSPYL2Q9H2G4 693 aaPredicted RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 CTAGE15A4D2H0 777 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 POTEB2H3BUK9 544 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 CTAGE8P0CG41 777 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 GFAPP14136 432 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 RARSP54136 660 aaKnown RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 CTAGE6Q86UF2 777 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 CTAGE4Q8IX94 777 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 FEZ1Q99689 392 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 ORC3Q9UBD5 711 aaPredicted RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 PAXBP1Q9Y5B6 917 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 CTAGE5O15320 804 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 ZBTB16Q05516 673 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 RRAGBQ5VZM2 374 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 USP48Q86UV5 1035 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 WDR75Q8IWA0 830 aaKnown RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 ZNF444Q8N0Y2 327 aaPredicted RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 SH2B1Q9NRF2 756 aaPredicted RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 SAMM50Q9Y512 469 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 BAZ1AQ9NRL2 1556 aaPredicted RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 FAM170AA1A519 330 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 FGFR1OPO95684 399 aaKnown RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 LMOD1P29536 600 aaPredicted RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 ATP6V1E1P36543 226 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 TMEM266Q2M3C6 531 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 LRSAM1Q6UWE0 723 aa7.47□□□□□ -1.21
PCDH18-201ENST00000344876 ARIH1Q9Y4X5 557 aaPredicted RBP7.47□□□□□ -1.21
PCDH18-201ENST00000344876 HIP1RO75146 1068 aa7.46□□□□□ -1.21
PCDH18-201ENST00000344876 PRIM1P49642 420 aaKnown RBP7.46□□□□□ -1.21
PCDH18-201ENST00000344876 KIF5AQ12840 1032 aa7.46□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC25Q86WR0 208 aa7.46□□□□□ -1.21
PCDH18-201ENST00000344876 PROSER2Q86WR7 435 aaPredicted RBP7.46□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC155Q8N6L0 562 aa7.46□□□□□ -1.21
PCDH18-201ENST00000344876 OTUD6BQ8N6M0 293 aa7.46□□□□□ -1.21
PCDH18-201ENST00000344876 GBP7Q8N8V2 638 aaPredicted RBP7.46□□□□□ -1.21
PCDH18-201ENST00000344876 PRPF38AQ8NAV1 312 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms