RNA–Protein interactions for RNA: ENST00000344604.9

ECM2-201, Transcript of extracellular matrix protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM2, Length 3,253 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-201ENST00000344604 TRAF1Q13077 416 aa11.1□□□□□ -0.63
ECM2-201ENST00000344604 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
ECM2-201ENST00000344604 FMNL3Q8IVF7 1028 aa11.1□□□□□ -0.63
ECM2-201ENST00000344604 RNF214Q8ND24 703 aa11.1□□□□□ -0.63
ECM2-201ENST00000344604 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
ECM2-201ENST00000344604 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
ECM2-201ENST00000344604 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
ECM2-201ENST00000344604 NAA30Q147X3 362 aaPredicted RBP11.09□□□□□ -0.63
ECM2-201ENST00000344604 GTF3C6Q969F1 213 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
ECM2-201ENST00000344604 NPC1L1Q9UHC9 1359 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 BCL9LQ86UU0 1499 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 EXOC5O00471 708 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 NEFHP12036 1026 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 ERCC3P19447 782 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 ARMC3Q5W041 872 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 MIEF2Q96C03 454 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 KIF1BPQ96EK5 621 aa11.09□□□□□ -0.63
ECM2-201ENST00000344604 PPFIA2O75334 1257 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 FAM163BP0C2L3 166 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 HOXC9P31274 260 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 KCNQ4P56696 695 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 VPS72Q15906 364 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 RAB3GAP1Q15042 981 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 FAM53CQ9NYF3 392 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 KNDC1Q76NI1 1749 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
ECM2-201ENST00000344604 RAPGEF4Q8WZA2 1011 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
ECM2-201ENST00000344604 SH3GL3Q99963 347 aa11.08□□□□□ -0.64
ECM2-201ENST00000344604 VIRMAQ69YN4 1812 aaKnown RBP11.08□□□□□ -0.64
ECM2-201ENST00000344604 POLR3GO15318 223 aaPredicted RBP11.07□□□□□ -0.64
ECM2-201ENST00000344604 CCDC26Q8TAB7 109 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 CCDC7Q96M83 1385 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 MYBL2P10244 700 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 RWDD2BP57060 319 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 TPM4P67936 248 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 NUCB2P80303 420 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 PTF1AQ7RTS3 328 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 SDR16C5Q8N3Y7 309 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 FBXO18Q8NFZ0 1043 aa11.07□□□□□ -0.64
ECM2-201ENST00000344604 EN1Q05925 392 aaPredicted RBP11.06□□□□□ -0.64
ECM2-201ENST00000344604 NUB1Q9Y5A7 615 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 CPSF1Q10570 1443 aaKnown RBP11.06□□□□□ -0.64
ECM2-201ENST00000344604 KIAA1210Q9ULL0 1709 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 CD151P48509 253 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 GOLGA5Q8TBA6 731 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 EDC4Q6P2E9 1401 aaKnown RBP11.06□□□□□ -0.64
ECM2-201ENST00000344604 APBA3O96018 575 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 OATP04181 439 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 CHCHD3Q9NX63 227 aaKnown RBP11.06□□□□□ -0.64
ECM2-201ENST00000344604 SPATA31A1Q5TZJ5 1347 aa11.06□□□□□ -0.64
ECM2-201ENST00000344604 EIF3JO75822 258 aaKnown RBP11.05□□□□□ -0.64
ECM2-201ENST00000344604 CCDC186Q7Z3E2 898 aa11.05□□□□□ -0.64
ECM2-201ENST00000344604 IP6K1Q92551 441 aa11.05□□□□□ -0.64
ECM2-201ENST00000344604 KCNQ2O43526 872 aa11.05□□□□□ -0.64
ECM2-201ENST00000344604 SPATA31A5Q5VU36 1347 aa11.05□□□□□ -0.64
ECM2-201ENST00000344604 SPATA31A7Q8IWB4 1347 aa11.05□□□□□ -0.64
ECM2-201ENST00000344604 SMTNL1A8MU46 457 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 AP1G2O75843 785 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 NAT1P18440 290 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 SPATS2LQ9NUQ6 558 aaKnown RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 ERBB3P21860 1342 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 MAPK8IP3Q9UPT6 1336 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 NHSL1Q5SYE7 1610 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 EIF3CLB5ME19 914 aaKnown RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 SULT6B1Q6IMI4 303 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 CCDC112Q8NEF3 446 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 UPF1Q92900 1129 aaKnown RBP eCLIP11.04□□□□□ -0.64
ECM2-201ENST00000344604 EIF3CQ99613 913 aaKnown RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 MAGEA8P43361 318 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 RBBP5Q15291 538 aaKnown RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 GBP6Q6ZN66 633 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 KCNV2Q8TDN2 545 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 RTF1Q92541 710 aaKnown RBP11.04□□□□□ -0.64
ECM2-201ENST00000344604 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
ECM2-201ENST00000344604 TMCO5BA8MYB1 307 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 LRSAM1Q6UWE0 723 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 SMARCE1Q969G3 411 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 PICK1Q9NRD5 415 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 BRD1O95696 1058 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 IL2RBP14784 551 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 ZRSR1Q15695 479 aaKnown RBP11.03□□□□□ -0.64
ECM2-201ENST00000344604 TEX11Q8IYF3 940 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 CCDC34Q96HJ3 373 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 KIF2CQ99661 725 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 VEZTQ9HBM0 779 aa11.03□□□□□ -0.64
ECM2-201ENST00000344604 RAD21O60216 631 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms