RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
CLDN18-202ENST00000343735 SURF6O75683 361 aaKnown RBP11.99□□□□□ -0.49
CLDN18-202ENST00000343735 FOXO4P98177 505 aa11.99□□□□□ -0.49
CLDN18-202ENST00000343735 EZH2Q15910 746 aaKnown RBP11.99□□□□□ -0.49
CLDN18-202ENST00000343735 HSP90AA1P07900 732 aaKnown RBP11.99□□□□□ -0.49
CLDN18-202ENST00000343735 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLDN18-202ENST00000343735 LMBR1LQ6UX01 489 aa11.99□□□□□ -0.49
CLDN18-202ENST00000343735 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
CLDN18-202ENST00000343735 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
CLDN18-202ENST00000343735 UBR3Q6ZT12 1888 aa11.99□□□□□ -0.49
CLDN18-202ENST00000343735 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
CLDN18-202ENST00000343735 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
CLDN18-202ENST00000343735 LRRCC1Q9C099 1032 aa11.99□□□□□ -0.49
CLDN18-202ENST00000343735 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
CLDN18-202ENST00000343735 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
CLDN18-202ENST00000343735 NTSR2O95665 410 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 OS9Q13438 667 aaPredicted RBP11.98□□□□□ -0.49
CLDN18-202ENST00000343735 CCDC57Q2TAC2 916 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 CARMIL3Q8ND23 1372 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 CSF1RP07333 972 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 NBPF5PQ86XG9 351 aaPredicted RBP11.98□□□□□ -0.49
CLDN18-202ENST00000343735 KIF1BPQ96EK5 621 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 UPF2Q9HAU5 1272 aaKnown RBP11.98□□□□□ -0.49
CLDN18-202ENST00000343735 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 CHMP3Q9Y3E7 222 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 NPHP1O15259 732 aa11.98□□□□□ -0.49
CLDN18-202ENST00000343735 CTSWP56202 376 aa11.97□□□□□ -0.49
CLDN18-202ENST00000343735 SLC10A5Q5PT55 438 aa11.97□□□□□ -0.49
CLDN18-202ENST00000343735 JARID2Q92833 1246 aaPredicted RBP11.97□□□□□ -0.49
CLDN18-202ENST00000343735 PKNOX2Q96KN3 472 aa11.97□□□□□ -0.49
CLDN18-202ENST00000343735 GYS1P13807 737 aa11.97□□□□□ -0.49
CLDN18-202ENST00000343735 IFIT5Q13325 482 aaKnown RBP11.97□□□□□ -0.49
CLDN18-202ENST00000343735 ZNF827Q17R98 1081 aa11.97□□□□□ -0.49
CLDN18-202ENST00000343735 EPHA10Q5JZY3 1008 aa11.97□□□□□ -0.49
CLDN18-202ENST00000343735 BICDL1Q6ZP65 573 aa11.97□□□□□ -0.49
CLDN18-202ENST00000343735 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
CLDN18-202ENST00000343735 OTUD7AQ8TE49 926 aaPredicted RBP11.96□□□□□ -0.49
CLDN18-202ENST00000343735 C4AP0C0L4 1744 aa11.96□□□□□ -0.49
CLDN18-202ENST00000343735 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.49
CLDN18-202ENST00000343735 EXOC6BQ9Y2D4 811 aa11.96□□□□□ -0.49
CLDN18-202ENST00000343735 ANKRD18BA2A2Z9 1011 aa11.96□□□□□ -0.5
CLDN18-202ENST00000343735 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 TTLL11Q8NHH1 800 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 FAM177BA6PVY3 158 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 CIAO1O76071 339 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 NFIXQ14938 502 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
CLDN18-202ENST00000343735 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 RTL9Q8NET4 1388 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 MAP4K4O95819 1239 aaPredicted RBP11.95□□□□□ -0.5
CLDN18-202ENST00000343735 TM4SF1P30408 202 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 ST5P78524 1137 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 RHPN1Q8TCX5 695 aa11.95□□□□□ -0.5
CLDN18-202ENST00000343735 RFX5P48382 616 aaPredicted RBP11.94□□□□□ -0.5
CLDN18-202ENST00000343735 CLASRPQ8N2M8 674 aaKnown RBP11.94□□□□□ -0.5
CLDN18-202ENST00000343735 PNPLA7Q6ZV29 1317 aa11.94□□□□□ -0.5
CLDN18-202ENST00000343735 IL15P40933 162 aaPredicted RBP11.94□□□□□ -0.5
CLDN18-202ENST00000343735 PTPN12Q05209 780 aaKnown RBP11.94□□□□□ -0.5
CLDN18-202ENST00000343735 SMIM5Q71RC9 77 aa11.94□□□□□ -0.5
CLDN18-202ENST00000343735 CNBD1Q8NA66 436 aa11.94□□□□□ -0.5
CLDN18-202ENST00000343735 SF3B3Q15393 1217 aaKnown RBP11.93□□□□□ -0.5
CLDN18-202ENST00000343735 ERFEQ4G0M1 354 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 DEFB132Q7Z7B7 95 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 RIC1Q4ADV7 1423 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 SERPINB2P05120 415 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 HCLS1P14317 486 aaPredicted RBP11.93□□□□□ -0.5
CLDN18-202ENST00000343735 ITGA6P23229 1130 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 NUTM1Q86Y26 1132 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
CLDN18-202ENST00000343735 QSER1Q2KHR3 1735 aa11.93□□□□□ -0.5
CLDN18-202ENST00000343735 EYA2O00167 538 aa11.92□□□□□ -0.5
CLDN18-202ENST00000343735 GPATCH3Q96I76 525 aa11.92□□□□□ -0.5
CLDN18-202ENST00000343735 PA2G4Q9UQ80 394 aaKnown RBP11.92□□□□□ -0.5
CLDN18-202ENST00000343735 PARP3Q9Y6F1 533 aa11.92□□□□□ -0.5
CLDN18-202ENST00000343735 SYNE4Q8N205 404 aa11.92□□□□□ -0.5
CLDN18-202ENST00000343735 GPR108Q9NPR9 543 aa11.92□□□□□ -0.5
CLDN18-202ENST00000343735 LAMB2P55268 1798 aa11.92□□□□□ -0.5
CLDN18-202ENST00000343735 IGHMBP2P38935 993 aaKnown RBP11.91□□□□□ -0.5
CLDN18-202ENST00000343735 DDRGK1Q96HY6 314 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 AKAP2Q9Y2D5 859 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 SIL1Q9H173 461 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 GREM2Q9H772 168 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 AOX1Q06278 1338 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
CLDN18-202ENST00000343735 LDHAL6AQ6ZMR3 332 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 MPHOSPH8Q99549 860 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
CLDN18-202ENST00000343735 MYH3P11055 1940 aa11.9□□□□□ -0.5
CLDN18-202ENST00000343735 POLRMTO00411 1230 aaKnown RBP11.9□□□□□ -0.5
CLDN18-202ENST00000343735 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLDN18-202ENST00000343735 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
CLDN18-202ENST00000343735 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.5
CLDN18-202ENST00000343735 CNNM1Q9NRU3 951 aa11.9□□□□□ -0.5
CLDN18-202ENST00000343735 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
CLDN18-202ENST00000343735 DDX46Q7L014 1031 aaKnown RBP11.89□□□□□ -0.51
CLDN18-202ENST00000343735 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms