RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 NLRP3Q96P20 1036 aa20.32■□□□□ 0.84
SNED1-202ENST00000342631 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
SNED1-202ENST00000342631 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
SNED1-202ENST00000342631 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
SNED1-202ENST00000342631 NOP58Q9Y2X3 529 aaKnown RBP20.31■□□□□ 0.84
SNED1-202ENST00000342631 ABCC12Q96J65 1359 aa20.3■□□□□ 0.84
SNED1-202ENST00000342631 MSL1Q68DK7 614 aa20.3■□□□□ 0.84
SNED1-202ENST00000342631 COPRSQ9NQ92 184 aa20.3■□□□□ 0.84
SNED1-202ENST00000342631 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
SNED1-202ENST00000342631 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
SNED1-202ENST00000342631 IFIT5Q13325 482 aaKnown RBP20.29■□□□□ 0.84
SNED1-202ENST00000342631 R3HDM1Q15032 1099 aaKnown RBP20.29■□□□□ 0.84
SNED1-202ENST00000342631 FBXO3Q9UK99 471 aa20.29■□□□□ 0.84
SNED1-202ENST00000342631 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
SNED1-202ENST00000342631 MTFR1LQ9H019 292 aa20.29■□□□□ 0.84
SNED1-202ENST00000342631 RAB11FIP3O75154 756 aa20.28■□□□□ 0.84
SNED1-202ENST00000342631 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
SNED1-202ENST00000342631 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
SNED1-202ENST00000342631 SURF6O75683 361 aaKnown RBP20.27■□□□□ 0.84
SNED1-202ENST00000342631 ITGA6P23229 1130 aa20.27■□□□□ 0.84
SNED1-202ENST00000342631 PTPN12Q05209 780 aaKnown RBP20.27■□□□□ 0.84
SNED1-202ENST00000342631 BRIP1Q9BX63 1249 aa20.27■□□□□ 0.84
SNED1-202ENST00000342631 GREM2Q9H772 168 aa20.27■□□□□ 0.84
SNED1-202ENST00000342631 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
SNED1-202ENST00000342631 ERC1Q8IUD2 1116 aa20.26■□□□□ 0.83
SNED1-202ENST00000342631 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNED1-202ENST00000342631 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
SNED1-202ENST00000342631 CDC5LQ99459 802 aaKnown RBP20.25■□□□□ 0.83
SNED1-202ENST00000342631 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
SNED1-202ENST00000342631 CIAO1O76071 339 aa20.24■□□□□ 0.83
SNED1-202ENST00000342631 PDE6BP35913 854 aa20.24■□□□□ 0.83
SNED1-202ENST00000342631 NUCB1Q02818 461 aa20.24■□□□□ 0.83
SNED1-202ENST00000342631 CRY2Q49AN0 593 aa20.24■□□□□ 0.83
SNED1-202ENST00000342631 TAF7LQ5H9L4 462 aa20.24■□□□□ 0.83
SNED1-202ENST00000342631 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
SNED1-202ENST00000342631 EXOC6BQ9Y2D4 811 aa20.24■□□□□ 0.83
SNED1-202ENST00000342631 TNRC6CQ9HCJ0 1690 aaKnown RBP20.24■□□□□ 0.83
SNED1-202ENST00000342631 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
SNED1-202ENST00000342631 POLD1P28340 1107 aa20.23■□□□□ 0.83
SNED1-202ENST00000342631 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
SNED1-202ENST00000342631 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
SNED1-202ENST00000342631 ANKRD31Q8N7Z5 1873 aa20.22■□□□□ 0.83
SNED1-202ENST00000342631 OS9Q13438 667 aaPredicted RBP20.22■□□□□ 0.83
SNED1-202ENST00000342631 C3orf67Q6ZVT6 689 aa20.22■□□□□ 0.83
SNED1-202ENST00000342631 CCDC24Q8N4L8 307 aa20.22■□□□□ 0.83
SNED1-202ENST00000342631 LRRCC1Q9C099 1032 aa20.22■□□□□ 0.83
SNED1-202ENST00000342631 EYA2O00167 538 aa20.21■□□□□ 0.83
SNED1-202ENST00000342631 IL15P40933 162 aaPredicted RBP20.21■□□□□ 0.83
SNED1-202ENST00000342631 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
SNED1-202ENST00000342631 DDX46Q7L014 1031 aaKnown RBP20.21■□□□□ 0.83
SNED1-202ENST00000342631 ZBTB7AO95365 584 aa20.21■□□□□ 0.83
SNED1-202ENST00000342631 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
SNED1-202ENST00000342631 CHD1LQ86WJ1 897 aa20.21■□□□□ 0.83
SNED1-202ENST00000342631 KLHDC4Q8TBB5 520 aa20.21■□□□□ 0.83
SNED1-202ENST00000342631 LRP5O75197 1615 aa20.21■□□□□ 0.83
SNED1-202ENST00000342631 HOXA10P31260 410 aaPredicted RBP20.2■□□□□ 0.82
SNED1-202ENST00000342631 LDHAL6AQ6ZMR3 332 aa20.2■□□□□ 0.82
SNED1-202ENST00000342631 RHPN1Q8TCX5 695 aa20.2■□□□□ 0.82
SNED1-202ENST00000342631 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
SNED1-202ENST00000342631 SIL1Q9H173 461 aa20.2■□□□□ 0.82
SNED1-202ENST00000342631 PSDA5PKW4 1024 aaPredicted RBP20.19■□□□□ 0.82
SNED1-202ENST00000342631 ANKRD18AQ8IVF6 992 aa20.19■□□□□ 0.82
SNED1-202ENST00000342631 RBM17Q96I25 401 aaKnown RBP20.19■□□□□ 0.82
SNED1-202ENST00000342631 ZNF594Q96JF6 807 aaPredicted RBP20.19■□□□□ 0.82
SNED1-202ENST00000342631 MPHOSPH8Q99549 860 aa20.19■□□□□ 0.82
SNED1-202ENST00000342631 SEC31BQ9NQW1 1179 aa20.19■□□□□ 0.82
SNED1-202ENST00000342631 C10orf71Q711Q0 1435 aa20.18■□□□□ 0.82
SNED1-202ENST00000342631 ATG9AQ7Z3C6 839 aa20.18■□□□□ 0.82
SNED1-202ENST00000342631 CRAMP1Q96RY5 1269 aa20.18■□□□□ 0.82
SNED1-202ENST00000342631 RPS8P62241 208 aaKnown RBP20.17■□□□□ 0.82
SNED1-202ENST00000342631 CNNM1Q9NRU3 951 aa20.17■□□□□ 0.82
SNED1-202ENST00000342631 BSDC1Q9NW68 430 aaPredicted RBP20.17■□□□□ 0.82
SNED1-202ENST00000342631 ATF5Q9Y2D1 282 aaPredicted RBP20.17■□□□□ 0.82
SNED1-202ENST00000342631 RIPOR2Q9Y4F9 1068 aa20.17■□□□□ 0.82
SNED1-202ENST00000342631 SASH1O94885 1247 aa20.17■□□□□ 0.82
SNED1-202ENST00000342631 NPR1P16066 1061 aa20.17■□□□□ 0.82
SNED1-202ENST00000342631 GRAPQ13588 217 aa20.17■□□□□ 0.82
SNED1-202ENST00000342631 GRAPLQ8TC17 118 aaPredicted RBP20.17■□□□□ 0.82
SNED1-202ENST00000342631 KIF13BQ9NQT8 1826 aa20.17■□□□□ 0.82
SNED1-202ENST00000342631 MROH5Q6ZUA9 1318 aa20.17■□□□□ 0.82
SNED1-202ENST00000342631 APBB1O00213 710 aa20.16■□□□□ 0.82
SNED1-202ENST00000342631 SRGNP10124 158 aa20.16■□□□□ 0.82
SNED1-202ENST00000342631 SGIP1Q9BQI5 828 aa20.16■□□□□ 0.82
SNED1-202ENST00000342631 ALDH1B1P30837 517 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 LRRC24Q50LG9 513 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
SNED1-202ENST00000342631 MASTLQ96GX5 879 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 GPR108Q9NPR9 543 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 CEP126Q9P2H0 1117 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 H0YIN7 160 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 BBOX1O75936 387 aa20.15■□□□□ 0.82
SNED1-202ENST00000342631 PUS3Q9BZE2 481 aaKnown RBP20.15■□□□□ 0.82
SNED1-202ENST00000342631 CELF1Q92879 486 aaKnown RBP20.14■□□□□ 0.81
SNED1-202ENST00000342631 STYK1Q6J9G0 422 aa20.14■□□□□ 0.81
SNED1-202ENST00000342631 SPON1Q9HCB6 807 aa20.14■□□□□ 0.81
SNED1-202ENST00000342631 AKAP2Q9Y2D5 859 aa20.14■□□□□ 0.81
SNED1-202ENST00000342631 SPEF2Q9C093 1822 aa20.13■□□□□ 0.81
SNED1-202ENST00000342631 TFCP2Q12800 502 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms