RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 DDR1Q08345 913 aa23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 CCDC57Q2TAC2 916 aa23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 CNBD1Q8NA66 436 aa23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 PDGFDQ9GZP0 370 aaPredicted RBP23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 SMARCA5O60264 1052 aaPredicted RBP23.97■■□□□ 1.43
GTF3C5-201ENST00000342018 CSF1RP07333 972 aa23.97■■□□□ 1.43
GTF3C5-201ENST00000342018 HSP90B1P14625 803 aaKnown RBP23.97■■□□□ 1.43
GTF3C5-201ENST00000342018 RFX5P48382 616 aaPredicted RBP23.97■■□□□ 1.43
GTF3C5-201ENST00000342018 ILDR2Q71H61 639 aa23.97■■□□□ 1.43
GTF3C5-201ENST00000342018 CHD1LQ86WJ1 897 aa23.97■■□□□ 1.43
GTF3C5-201ENST00000342018 GREM2Q9H772 168 aa23.97■■□□□ 1.43
GTF3C5-201ENST00000342018 DDX60Q8IY21 1712 aaKnown RBP23.96■■□□□ 1.43
GTF3C5-201ENST00000342018 ZNF594Q96JF6 807 aaPredicted RBP23.96■■□□□ 1.43
GTF3C5-201ENST00000342018 MYH3P11055 1940 aa23.96■■□□□ 1.43
GTF3C5-201ENST00000342018 PTPN12Q05209 780 aaKnown RBP23.96■■□□□ 1.43
GTF3C5-201ENST00000342018 IFIT5Q13325 482 aaKnown RBP23.96■■□□□ 1.43
GTF3C5-201ENST00000342018 POLRMTO00411 1230 aaKnown RBP23.95■■□□□ 1.42
GTF3C5-201ENST00000342018 G3BP1Q13283 466 aaKnown RBP eCLIP23.95■■□□□ 1.42
GTF3C5-201ENST00000342018 TAF7LQ5H9L4 462 aa23.95■■□□□ 1.42
GTF3C5-201ENST00000342018 MMP10P09238 476 aa23.94■■□□□ 1.42
GTF3C5-201ENST00000342018 ITGA6P23229 1130 aa23.94■■□□□ 1.42
GTF3C5-201ENST00000342018 C3orf67Q6ZVT6 689 aa23.94■■□□□ 1.42
GTF3C5-201ENST00000342018 NOP58Q9Y2X3 529 aaKnown RBP23.94■■□□□ 1.42
GTF3C5-201ENST00000342018 HSP90AB4PQ58FF6 505 aa23.94■■□□□ 1.42
GTF3C5-201ENST00000342018 PRR5LQ6MZQ0 368 aa23.94■■□□□ 1.42
GTF3C5-201ENST00000342018 LRRCC1Q9C099 1032 aa23.94■■□□□ 1.42
GTF3C5-201ENST00000342018 QSER1Q2KHR3 1735 aa23.93■■□□□ 1.42
GTF3C5-201ENST00000342018 COPRSQ9NQ92 184 aa23.93■■□□□ 1.42
GTF3C5-201ENST00000342018 ANKRD18BA2A2Z9 1011 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 RAB11FIP3O75154 756 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 CCDC152Q4G0S7 254 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 SLC10A5Q5PT55 438 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 NLRP3Q96P20 1036 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 LAMB2P55268 1798 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 ST5P78524 1137 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 IL1RAPL2Q9NP60 686 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 PARP3Q9Y6F1 533 aa23.92■■□□□ 1.42
GTF3C5-201ENST00000342018 PDE4AP27815 886 aa23.91■■□□□ 1.42
GTF3C5-201ENST00000342018 SEC31BQ9NQW1 1179 aa23.91■■□□□ 1.42
GTF3C5-201ENST00000342018 C16orf71Q8IYS4 520 aaPredicted RBP23.9■■□□□ 1.42
GTF3C5-201ENST00000342018 RHPN1Q8TCX5 695 aa23.9■■□□□ 1.42
GTF3C5-201ENST00000342018 KIF1BPQ96EK5 621 aa23.9■■□□□ 1.42
GTF3C5-201ENST00000342018 PUS3Q9BZE2 481 aaKnown RBP23.89■■□□□ 1.42
GTF3C5-201ENST00000342018 R3HDM1Q15032 1099 aaKnown RBP23.88■■□□□ 1.41
GTF3C5-201ENST00000342018 LRRC24Q50LG9 513 aa23.88■■□□□ 1.41
GTF3C5-201ENST00000342018 ERC1Q8IUD2 1116 aa23.88■■□□□ 1.41
GTF3C5-201ENST00000342018 SASH1O94885 1247 aa23.87■■□□□ 1.41
GTF3C5-201ENST00000342018 SF3B3Q15393 1217 aaKnown RBP23.87■■□□□ 1.41
GTF3C5-201ENST00000342018 EYA2O00167 538 aa23.86■■□□□ 1.41
GTF3C5-201ENST00000342018 TNRC6CQ9HCJ0 1690 aaKnown RBP23.86■■□□□ 1.41
GTF3C5-201ENST00000342018 CASZ1Q86V15 1759 aa23.86■■□□□ 1.41
GTF3C5-201ENST00000342018 LDHAL6AQ6ZMR3 332 aa23.86■■□□□ 1.41
GTF3C5-201ENST00000342018 OTUD7AQ8TE49 926 aaPredicted RBP23.86■■□□□ 1.41
GTF3C5-201ENST00000342018 TFCP2Q12800 502 aa23.85■■□□□ 1.41
GTF3C5-201ENST00000342018 ATG9AQ7Z3C6 839 aa23.85■■□□□ 1.41
GTF3C5-201ENST00000342018 CNNM1Q9NRU3 951 aa23.85■■□□□ 1.41
GTF3C5-201ENST00000342018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.85■■□□□ 1.41
GTF3C5-201ENST00000342018 PSDA5PKW4 1024 aaPredicted RBP23.84■■□□□ 1.41
GTF3C5-201ENST00000342018 ZBTB7AO95365 584 aa23.84■■□□□ 1.41
GTF3C5-201ENST00000342018 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
GTF3C5-201ENST00000342018 MPHOSPH8Q99549 860 aa23.84■■□□□ 1.41
GTF3C5-201ENST00000342018 IGHMBP2P38935 993 aaKnown RBP23.83■■□□□ 1.41
GTF3C5-201ENST00000342018 IL15P40933 162 aaPredicted RBP23.83■■□□□ 1.41
GTF3C5-201ENST00000342018 CLASRPQ8N2M8 674 aaKnown RBP23.83■■□□□ 1.41
GTF3C5-201ENST00000342018 SLC16A10Q8TF71 515 aa23.83■■□□□ 1.41
GTF3C5-201ENST00000342018 CDC5LQ99459 802 aaKnown RBP23.83■■□□□ 1.41
GTF3C5-201ENST00000342018 RTL9Q8NET4 1388 aa23.83■■□□□ 1.41
GTF3C5-201ENST00000342018 CIAO1O76071 339 aa23.82■■□□□ 1.4
GTF3C5-201ENST00000342018 DDX46Q7L014 1031 aaKnown RBP23.82■■□□□ 1.4
GTF3C5-201ENST00000342018 TAF1P21675 1872 aa23.81■■□□□ 1.4
GTF3C5-201ENST00000342018 AACSQ86V21 672 aa23.81■■□□□ 1.4
GTF3C5-201ENST00000342018 ANKRD18AQ8IVF6 992 aa23.81■■□□□ 1.4
GTF3C5-201ENST00000342018 RPGRQ92834 1020 aaKnown RBP23.81■■□□□ 1.4
GTF3C5-201ENST00000342018 CELF1Q92879 486 aaKnown RBP23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 COL4A1P02462 1669 aa23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 SPEF2Q9C093 1822 aa23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 METTL24Q5JXM2 366 aa23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 PLEKHM2Q8IWE5 1019 aa23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 ATF5Q9Y2D1 282 aaPredicted RBP23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 RIPOR2Q9Y4F9 1068 aa23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 NRXN2Q9P2S2 1712 aa23.8■■□□□ 1.4
GTF3C5-201ENST00000342018 BRIP1Q9BX63 1249 aa23.79■■□□□ 1.4
GTF3C5-201ENST00000342018 CCDC8Q9H0W5 538 aaPredicted RBP23.79■■□□□ 1.4
GTF3C5-201ENST00000342018 CEP126Q9P2H0 1117 aa23.79■■□□□ 1.4
GTF3C5-201ENST00000342018 IFIT2P09913 472 aaKnown RBP23.78■■□□□ 1.4
GTF3C5-201ENST00000342018 TSHZ3Q63HK5 1081 aa23.78■■□□□ 1.4
GTF3C5-201ENST00000342018 EAF2Q96CJ1 260 aaPredicted RBP23.78■■□□□ 1.4
GTF3C5-201ENST00000342018 RIC1Q4ADV7 1423 aa23.78■■□□□ 1.4
GTF3C5-201ENST00000342018 TNNI3KQ59H18 835 aa23.77■■□□□ 1.4
GTF3C5-201ENST00000342018 HELBQ8NG08 1087 aaPredicted RBP23.77■■□□□ 1.4
GTF3C5-201ENST00000342018 FPGT-TNNI3KV9GXZ4 949 aa23.77■■□□□ 1.4
GTF3C5-201ENST00000342018 MX1P20591 662 aa23.76■■□□□ 1.39
GTF3C5-201ENST00000342018 RPS8P62241 208 aaKnown RBP23.76■■□□□ 1.39
GTF3C5-201ENST00000342018 CRY2Q49AN0 593 aa23.76■■□□□ 1.39
GTF3C5-201ENST00000342018 ANKRD31Q8N7Z5 1873 aa23.76■■□□□ 1.39
GTF3C5-201ENST00000342018 NEUROD6Q96NK8 337 aa23.76■■□□□ 1.39
GTF3C5-201ENST00000342018 TLR7Q9NYK1 1049 aaKnown RBP23.76■■□□□ 1.39
GTF3C5-201ENST00000342018 PDE6BP35913 854 aa23.75■■□□□ 1.39
GTF3C5-201ENST00000342018 RBM17Q96I25 401 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms