RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 ROCK1Q13464 1354 aa13.77□□□□□ -0.21
TPX2-202ENST00000340513 SCNN1BP51168 640 aa13.77□□□□□ -0.21
TPX2-202ENST00000340513 NEK4P51957 841 aa13.77□□□□□ -0.21
TPX2-202ENST00000340513 EZH1Q92800 747 aaPredicted RBP13.77□□□□□ -0.21
TPX2-202ENST00000340513 AKAP2Q9Y2D5 859 aa13.77□□□□□ -0.21
TPX2-202ENST00000340513 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
TPX2-202ENST00000340513 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
TPX2-202ENST00000340513 MAGEA8P43361 318 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
TPX2-202ENST00000340513 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 TAX1BP1Q86VP1 789 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 KANK1Q14678 1352 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.76□□□□□ -0.21
TPX2-202ENST00000340513 APBB1O00213 710 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 LONRF2Q1L5Z9 754 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 FAM200AQ8TCP9 573 aa13.76□□□□□ -0.21
TPX2-202ENST00000340513 ATP8B1O43520 1251 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 RSRC1Q96IZ7 334 aaKnown RBP13.75□□□□□ -0.21
TPX2-202ENST00000340513 UHRF1BP1LA0JNW5 1464 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 HMMRO75330 724 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 PRPHP41219 470 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
TPX2-202ENST00000340513 DZIP1LQ8IYY4 767 aaKnown RBP13.75□□□□□ -0.21
TPX2-202ENST00000340513 IQCGQ9H095 443 aaKnown RBP13.75□□□□□ -0.21
TPX2-202ENST00000340513 FAM204AQ9H8W3 233 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 SAMM50Q9Y512 469 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 PCDHGA4Q9Y5G9 962 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 KIAA1107Q9UPP5 1409 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 ZNF75DP51815 510 aa13.75□□□□□ -0.21
TPX2-202ENST00000340513 MVPQ14764 893 aaKnown RBP13.75□□□□□ -0.21
TPX2-202ENST00000340513 SGSM2O43147 1006 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 CCDC15Q0P6D6 951 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 LRRC23Q53EV4 343 aaPredicted RBP13.74□□□□□ -0.21
TPX2-202ENST00000340513 LRRC8AQ8IWT6 810 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 PHACTR1Q9C0D0 580 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 PARD3Q8TEW0 1356 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 LRRIQ1Q96JM4 1722 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 ZMYM4Q5VZL5 1548 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 RAB27AP51159 221 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 C16orf87Q6PH81 154 aa13.74□□□□□ -0.21
TPX2-202ENST00000340513 SHTN1A0MZ66 631 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
TPX2-202ENST00000340513 ELP1O95163 1332 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 ERBB3P21860 1342 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 VIRMAQ69YN4 1812 aaKnown RBP13.73□□□□□ -0.21
TPX2-202ENST00000340513 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 CHD1LQ86WJ1 897 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 NCAPG2Q86XI2 1143 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 ZNF189O75820 626 aaPredicted RBP13.73□□□□□ -0.21
TPX2-202ENST00000340513 NEFHP12036 1026 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 SETDB1Q15047 1291 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
TPX2-202ENST00000340513 CDC25CP30307 473 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 ANO6Q4KMQ2 910 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 CCDC178Q5BJE1 867 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 CAPRIN2Q6IMN6 1127 aaKnown RBP13.72□□□□□ -0.21
TPX2-202ENST00000340513 KCNV2Q8TDN2 545 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 ABCC10Q5T3U5 1492 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
TPX2-202ENST00000340513 EIF4E1BA6NMX2 242 aaKnown RBP13.72□□□□□ -0.21
TPX2-202ENST00000340513 BECN2A8MW95 431 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 ATP6V1G1O75348 118 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 PREPLQ4J6C6 727 aaPredicted RBP13.72□□□□□ -0.21
TPX2-202ENST00000340513 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
TPX2-202ENST00000340513 CLIC6Q96NY7 704 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 USP26Q9BXU7 913 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 PARD6BQ9BYG5 372 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 CCDC158Q5M9N0 1113 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 LMBR1Q8WVP7 490 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 C1orf115Q9H7X2 142 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 DIP2BQ9P265 1576 aa13.72□□□□□ -0.21
TPX2-202ENST00000340513 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.21
TPX2-202ENST00000340513 PPP2R1AP30153 589 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 ACBD5Q5T8D3 534 aaPredicted RBP13.71□□□□□ -0.21
TPX2-202ENST00000340513 DYDC1Q8WWB3 177 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 FUT8Q9BYC5 575 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.21
TPX2-202ENST00000340513 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 HOOK3Q86VS8 718 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 CEP112Q8N8E3 955 aa13.71□□□□□ -0.21
TPX2-202ENST00000340513 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
TPX2-202ENST00000340513 MMADHCQ9H3L0 296 aaPredicted RBP13.71□□□□□ -0.21
TPX2-202ENST00000340513 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.21
TPX2-202ENST00000340513 IL16Q14005 1332 aa13.71□□□□□ -0.22
TPX2-202ENST00000340513 MYL1P05976 194 aa13.71□□□□□ -0.22
TPX2-202ENST00000340513 SLC5A9Q2M3M2 681 aa13.71□□□□□ -0.22
TPX2-202ENST00000340513 SLC30A9Q6PML9 568 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms