RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 TMEM87AQ8NBN3 555 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 TPM3P06753 285 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 MFSD6Q6ZSS7 791 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 TSPYL6Q8N831 410 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 STX8Q9UNK0 236 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 SLC12A7Q9Y666 1083 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 PARD3Q8TEW0 1356 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 SSBP05455 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
LIN54-201ENST00000340417 SPATA31E1Q6ZUB1 1445 aa15.08■□□□□ 0.01
LIN54-201ENST00000340417 RHPN1Q8TCX5 695 aa15.08■□□□□ 0.01
LIN54-201ENST00000340417 PA2G4Q9UQ80 394 aaKnown RBP15.08■□□□□ 0.01
LIN54-201ENST00000340417 ZNF396Q96N95 335 aaPredicted RBP15.08■□□□□ 0
LIN54-201ENST00000340417 SERPINB2P05120 415 aa15.08■□□□□ 0
LIN54-201ENST00000340417 DALRD3Q5D0E6 543 aaKnown RBP15.08■□□□□ 0
LIN54-201ENST00000340417 BICC1Q9H694 974 aaKnown RBP15.08■□□□□ 0
LIN54-201ENST00000340417 PPP4R3AQ6IN85 833 aa15.08■□□□□ 0
LIN54-201ENST00000340417 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0
LIN54-201ENST00000340417 STK38Q15208 465 aa15.07■□□□□ 0
LIN54-201ENST00000340417 RABEP1Q15276 862 aa15.07■□□□□ 0
LIN54-201ENST00000340417 KDM5AP29375 1690 aaKnown RBP15.07■□□□□ 0
LIN54-201ENST00000340417 ZFYP08048 801 aaPredicted RBP15.07■□□□□ 0
LIN54-201ENST00000340417 SLC9C2Q5TAH2 1124 aa15.07■□□□□ 0
LIN54-201ENST00000340417 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
LIN54-201ENST00000340417 RBM19Q9Y4C8 960 aaKnown RBP15.07■□□□□ 0
LIN54-201ENST00000340417 DLGAP5Q15398 846 aa15.07■□□□□ 0
LIN54-201ENST00000340417 SPON1Q9HCB6 807 aa15.07■□□□□ 0
LIN54-201ENST00000340417 DDX49Q9Y6V7 483 aaKnown RBP15.07■□□□□ 0
LIN54-201ENST00000340417 AGLP35573 1532 aa15.06■□□□□ 0
LIN54-201ENST00000340417 DCPSQ96C86 337 aaKnown RBP15.06■□□□□ 0
LIN54-201ENST00000340417 DDX11L8A8MPP1 907 aa15.06■□□□□ 0
LIN54-201ENST00000340417 KIF5BP33176 963 aa15.06■□□□□ 0
LIN54-201ENST00000340417 EIF4A1P60842 406 aaKnown RBP15.06■□□□□ 0
LIN54-201ENST00000340417 NUCB2P80303 420 aa15.06■□□□□ 0
LIN54-201ENST00000340417 VPS72Q15906 364 aa15.06■□□□□ 0
LIN54-201ENST00000340417 TMOD4Q9NZQ9 345 aa15.06■□□□□ 0
LIN54-201ENST00000340417 PALLDQ8WX93 1383 aa15.06■□□□□ 0
LIN54-201ENST00000340417 CDC42BPBQ9Y5S2 1711 aa15.06■□□□□ 0
LIN54-201ENST00000340417 RPS8P62241 208 aaKnown RBP15.06■□□□□ 0
LIN54-201ENST00000340417 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
LIN54-201ENST00000340417 SPDYE4A6NLX3 237 aa15.05■□□□□ 0
LIN54-201ENST00000340417 VAMP4O75379 141 aa15.05■□□□□ 0
LIN54-201ENST00000340417 CASTP20810 708 aaKnown RBP15.05■□□□□ 0
LIN54-201ENST00000340417 PUM3Q15397 648 aaKnown RBP15.05■□□□□ 0
LIN54-201ENST00000340417 JMYQ8N9B5 988 aa15.05■□□□□ 0
LIN54-201ENST00000340417 HAND2P61296 217 aa15.05■□□□□ -0
LIN54-201ENST00000340417 CEBPZQ03701 1054 aaKnown RBP15.05■□□□□ -0
LIN54-201ENST00000340417 MCM9Q9NXL9 1143 aa15.05■□□□□ -0
LIN54-201ENST00000340417 TFCP2Q12800 502 aa15.05■□□□□ -0
LIN54-201ENST00000340417 CCDC178Q5BJE1 867 aa15.05■□□□□ -0
LIN54-201ENST00000340417 BMP2KQ9NSY1 1161 aaPredicted RBP15.05■□□□□ -0
LIN54-201ENST00000340417 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
LIN54-201ENST00000340417 MAGEB6Q8N7X4 407 aa15.04■□□□□ -0
LIN54-201ENST00000340417 ATP8B2P98198 1209 aa15.04■□□□□ -0
LIN54-201ENST00000340417 TEX11Q8IYF3 940 aa15.04■□□□□ -0
LIN54-201ENST00000340417 CEP152O94986 1710 aa15.04■□□□□ -0
LIN54-201ENST00000340417 MIGA1Q8NAN2 632 aa15.04■□□□□ -0
LIN54-201ENST00000340417 USP16Q9Y5T5 823 aa15.04■□□□□ -0
LIN54-201ENST00000340417 SDF4Q9BRK5 362 aa15.04■□□□□ -0
LIN54-201ENST00000340417 MMP10P09238 476 aa15.04■□□□□ -0
LIN54-201ENST00000340417 SULF1Q8IWU6 871 aa15.04■□□□□ -0
LIN54-201ENST00000340417 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
LIN54-201ENST00000340417 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
LIN54-201ENST00000340417 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
LIN54-201ENST00000340417 C1orf167Q5SNV9 1468 aa15.03■□□□□ -0
LIN54-201ENST00000340417 TAF5LO75529 589 aa15.03■□□□□ -0
LIN54-201ENST00000340417 HMGB1P09429 215 aaKnown RBP15.03■□□□□ -0
LIN54-201ENST00000340417 TTC6Q86TZ1 520 aa15.03■□□□□ -0
LIN54-201ENST00000340417 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
LIN54-201ENST00000340417 TRAF1Q13077 416 aa15.03■□□□□ -0
LIN54-201ENST00000340417 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
LIN54-201ENST00000340417 B4DLN1 442 aa15.03■□□□□ -0
LIN54-201ENST00000340417 MRPL12P52815 198 aaKnown RBP15.03■□□□□ -0
LIN54-201ENST00000340417 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
LIN54-201ENST00000340417 GOLGA8AA7E2F4 631 aa15.03■□□□□ -0
LIN54-201ENST00000340417 GOLGA8BA8MQT2 603 aa15.03■□□□□ -0
LIN54-201ENST00000340417 PPEF1O14829 653 aaPredicted RBP15.03■□□□□ -0
LIN54-201ENST00000340417 KCNQ3O43525 872 aa15.03■□□□□ -0
LIN54-201ENST00000340417 OLFM4Q6UX06 510 aa15.03■□□□□ -0
LIN54-201ENST00000340417 ALKQ9UM73 1620 aa15.03■□□□□ -0
LIN54-201ENST00000340417 IL17REQ8NFR9 667 aa15.03■□□□□ -0
LIN54-201ENST00000340417 PLA2R1Q13018 1463 aa15.02■□□□□ -0
LIN54-201ENST00000340417 SLC27A3Q5K4L6 730 aa15.02■□□□□ -0
LIN54-201ENST00000340417 PIGBQ92521 554 aa15.02■□□□□ -0
LIN54-201ENST00000340417 IQGAP3Q86VI3 1631 aa15.02■□□□□ -0
LIN54-201ENST00000340417 ZSCAN31Q96LW9 406 aaPredicted RBP15.02■□□□□ -0
LIN54-201ENST00000340417 NPC1L1Q9UHC9 1359 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 SH2D4AQ9H788 454 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 OVOS2A0A0G2JMS6 1433 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 OVOS2A0A0J9YW53 1432 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 OVOS2Q6IE36 1432 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 EYA2O00167 538 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 CHL1O00533 1208 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 MSNP26038 577 aaKnown RBP15.02□□□□□ -0.01
LIN54-201ENST00000340417 TXNRD1Q16881 649 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 SASS6Q6UVJ0 657 aa15.02□□□□□ -0.01
LIN54-201ENST00000340417 CCDC12Q8WUD4 166 aaPredicted RBP15.02□□□□□ -0.01
LIN54-201ENST00000340417 ATP2B4P23634 1241 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms