RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ANKRD31Q8N7Z5 1873 aa22.34■■□□□ 1.17
SDCBP2-201ENST00000339987 RTL9Q8NET4 1388 aa22.33■■□□□ 1.17
SDCBP2-201ENST00000339987 KLRG2A4D1S0 409 aaPredicted RBP22.33■■□□□ 1.17
SDCBP2-201ENST00000339987 CCDC152Q4G0S7 254 aa22.32■■□□□ 1.16
SDCBP2-201ENST00000339987 C3orf67Q6ZVT6 689 aa22.32■■□□□ 1.16
SDCBP2-201ENST00000339987 CRY2Q49AN0 593 aa22.31■■□□□ 1.16
SDCBP2-201ENST00000339987 SIRT2Q8IXJ6 389 aa22.31■■□□□ 1.16
SDCBP2-201ENST00000339987 KIF13BQ9NQT8 1826 aa22.31■■□□□ 1.16
SDCBP2-201ENST00000339987 PDE6BP35913 854 aa22.31■■□□□ 1.16
SDCBP2-201ENST00000339987 POLA2Q14181 598 aa22.31■■□□□ 1.16
SDCBP2-201ENST00000339987 SSH3Q8TE77 659 aa22.31■■□□□ 1.16
SDCBP2-201ENST00000339987 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
SDCBP2-201ENST00000339987 PNMA6EA0A0J9YXQ4 647 aa22.3■■□□□ 1.16
SDCBP2-201ENST00000339987 SRGAP3O43295 1099 aa22.3■■□□□ 1.16
SDCBP2-201ENST00000339987 HMMRO75330 724 aa22.3■■□□□ 1.16
SDCBP2-201ENST00000339987 HDAC1Q13547 482 aaPredicted RBP22.29■■□□□ 1.16
SDCBP2-201ENST00000339987 FAM161AQ3B820 660 aa22.29■■□□□ 1.16
SDCBP2-201ENST00000339987 GREM2Q9H772 168 aa22.29■■□□□ 1.16
SDCBP2-201ENST00000339987 CHMP3Q9Y3E7 222 aa22.29■■□□□ 1.16
SDCBP2-201ENST00000339987 PPP4R2Q9NY27 417 aa22.28■■□□□ 1.16
SDCBP2-201ENST00000339987 RFX5P48382 616 aaPredicted RBP22.27■■□□□ 1.16
SDCBP2-201ENST00000339987 IFIT5Q13325 482 aaKnown RBP22.27■■□□□ 1.16
SDCBP2-201ENST00000339987 CCDC57Q2TAC2 916 aa22.27■■□□□ 1.16
SDCBP2-201ENST00000339987 CCDC85AQ96PX6 553 aaPredicted RBP22.27■■□□□ 1.16
SDCBP2-201ENST00000339987 ANKRD18BA2A2Z9 1011 aa22.26■■□□□ 1.15
SDCBP2-201ENST00000339987 ITGA6P23229 1130 aa22.26■■□□□ 1.15
SDCBP2-201ENST00000339987 HOXA10P31260 410 aaPredicted RBP22.26■■□□□ 1.15
SDCBP2-201ENST00000339987 COL11A2P13942 1736 aaPredicted RBP22.25■■□□□ 1.15
SDCBP2-201ENST00000339987 RPGRQ92834 1020 aaKnown RBP22.25■■□□□ 1.15
SDCBP2-201ENST00000339987 RWDD1Q9H446 243 aaPredicted RBP22.25■■□□□ 1.15
SDCBP2-201ENST00000339987 SRGNP10124 158 aa22.24■■□□□ 1.15
SDCBP2-201ENST00000339987 NPR1P16066 1061 aa22.24■■□□□ 1.15
SDCBP2-201ENST00000339987 DDX46Q7L014 1031 aaKnown RBP22.24■■□□□ 1.15
SDCBP2-201ENST00000339987 CDC5LQ99459 802 aaKnown RBP22.24■■□□□ 1.15
SDCBP2-201ENST00000339987 COPRSQ9NQ92 184 aa22.24■■□□□ 1.15
SDCBP2-201ENST00000339987 CD2APQ9Y5K6 639 aa22.24■■□□□ 1.15
SDCBP2-201ENST00000339987 PTPN12Q05209 780 aaKnown RBP22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 C2CD5Q86YS7 1000 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 RBM17Q96I25 401 aaKnown RBP22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 CRAMP1Q96RY5 1269 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 GTF3C3Q9Y5Q9 886 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 LRP5O75197 1615 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 H0YIN7 160 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 STYK1Q6J9G0 422 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 MASTLQ96GX5 879 aa22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 NOP58Q9Y2X3 529 aaKnown RBP22.23■■□□□ 1.15
SDCBP2-201ENST00000339987 DLEC1Q9Y238 1755 aa22.22■■□□□ 1.15
SDCBP2-201ENST00000339987 TGFB2P61812 414 aa22.22■■□□□ 1.15
SDCBP2-201ENST00000339987 CCDC136Q96JN2 1154 aa22.22■■□□□ 1.15
SDCBP2-201ENST00000339987 FBXO3Q9UK99 471 aa22.22■■□□□ 1.15
SDCBP2-201ENST00000339987 KIAA1551Q9HCM1 1747 aa22.21■■□□□ 1.15
SDCBP2-201ENST00000339987 IGHDP01880 384 aa22.21■■□□□ 1.15
SDCBP2-201ENST00000339987 GRAPQ13588 217 aa22.21■■□□□ 1.15
SDCBP2-201ENST00000339987 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
SDCBP2-201ENST00000339987 GRAPLQ8TC17 118 aaPredicted RBP22.21■■□□□ 1.15
SDCBP2-201ENST00000339987 DCTPP1Q9H773 170 aa22.21■■□□□ 1.15
SDCBP2-201ENST00000339987 ANKRD18AQ8IVF6 992 aa22.2■■□□□ 1.14
SDCBP2-201ENST00000339987 KLHDC4Q8TBB5 520 aa22.2■■□□□ 1.14
SDCBP2-201ENST00000339987 ZNF594Q96JF6 807 aaPredicted RBP22.2■■□□□ 1.14
SDCBP2-201ENST00000339987 PA2G4Q9UQ80 394 aaKnown RBP22.2■■□□□ 1.14
SDCBP2-201ENST00000339987 COL4A1P02462 1669 aa22.2■■□□□ 1.14
SDCBP2-201ENST00000339987 SURF6O75683 361 aaKnown RBP22.19■■□□□ 1.14
SDCBP2-201ENST00000339987 CIAO1O76071 339 aa22.19■■□□□ 1.14
SDCBP2-201ENST00000339987 CHRNA5P30532 468 aa22.19■■□□□ 1.14
SDCBP2-201ENST00000339987 IGHMBP2P38935 993 aaKnown RBP22.19■■□□□ 1.14
SDCBP2-201ENST00000339987 RPS8P62241 208 aaKnown RBP22.19■■□□□ 1.14
SDCBP2-201ENST00000339987 CELF1Q92879 486 aaKnown RBP22.19■■□□□ 1.14
SDCBP2-201ENST00000339987 EYA2O00167 538 aa22.18■■□□□ 1.14
SDCBP2-201ENST00000339987 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
SDCBP2-201ENST00000339987 HSP90AB4PQ58FF6 505 aa22.18■■□□□ 1.14
SDCBP2-201ENST00000339987 GCC1Q96CN9 775 aa22.18■■□□□ 1.14
SDCBP2-201ENST00000339987 TAF1P21675 1872 aa22.18■■□□□ 1.14
SDCBP2-201ENST00000339987 BBOX1O75936 387 aa22.17■■□□□ 1.14
SDCBP2-201ENST00000339987 DPEP1P16444 411 aa22.17■■□□□ 1.14
SDCBP2-201ENST00000339987 SMC5Q8IY18 1101 aa22.17■■□□□ 1.14
SDCBP2-201ENST00000339987 CNKSR1Q969H4 720 aa22.17■■□□□ 1.14
SDCBP2-201ENST00000339987 MPHOSPH8Q99549 860 aa22.17■■□□□ 1.14
SDCBP2-201ENST00000339987 BSDC1Q9NW68 430 aaPredicted RBP22.17■■□□□ 1.14
SDCBP2-201ENST00000339987 G3BP1Q13283 466 aaKnown RBP eCLIP22.16■■□□□ 1.14
SDCBP2-201ENST00000339987 B4GALNT3Q6L9W6 998 aa22.16■■□□□ 1.14
SDCBP2-201ENST00000339987 LDHAL6AQ6ZMR3 332 aa22.16■■□□□ 1.14
SDCBP2-201ENST00000339987 TMC4Q7Z404 712 aa22.16■■□□□ 1.14
SDCBP2-201ENST00000339987 ZNF622Q969S3 477 aaKnown RBP eCLIP22.16■■□□□ 1.14
SDCBP2-201ENST00000339987 EXOC6BQ9Y2D4 811 aa22.16■■□□□ 1.14
SDCBP2-201ENST00000339987 KDM2BQ8NHM5 1336 aa22.16■■□□□ 1.14
SDCBP2-201ENST00000339987 RAB11FIP3O75154 756 aa22.15■■□□□ 1.14
SDCBP2-201ENST00000339987 IL15P40933 162 aaPredicted RBP22.15■■□□□ 1.14
SDCBP2-201ENST00000339987 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
SDCBP2-201ENST00000339987 ATG9AQ7Z3C6 839 aa22.15■■□□□ 1.14
SDCBP2-201ENST00000339987 SIL1Q9H173 461 aa22.15■■□□□ 1.14
SDCBP2-201ENST00000339987 PPP1R1BQ9UD71 204 aaPredicted RBP22.15■■□□□ 1.14
SDCBP2-201ENST00000339987 SPEF2Q9C093 1822 aa22.15■■□□□ 1.14
SDCBP2-201ENST00000339987 A0A0G2JLW4 131 aa22.14■■□□□ 1.14
SDCBP2-201ENST00000339987 KCNA3P22001 575 aa22.14■■□□□ 1.14
SDCBP2-201ENST00000339987 LRRC24Q50LG9 513 aa22.14■■□□□ 1.14
SDCBP2-201ENST00000339987 ERC1Q8IUD2 1116 aa22.14■■□□□ 1.14
SDCBP2-201ENST00000339987 PUS3Q9BZE2 481 aaKnown RBP22.14■■□□□ 1.14
SDCBP2-201ENST00000339987 CNNM1Q9NRU3 951 aa22.14■■□□□ 1.14
SDCBP2-201ENST00000339987 RIPOR2Q9Y4F9 1068 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms