RNA–Protein interactions for RNA: ENST00000339642.10

ZNF254-201, Transcript of zinc finger protein 254, humanhuman

TSL 1 (best) BASIC

Gene ZNF254, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254-201ENST00000339642 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
ZNF254-201ENST00000339642 TRMT112Q9UI30 125 aaKnown RBP11.3□□□□□ -0.6
ZNF254-201ENST00000339642 FANCIQ9NVI1 1328 aa11.3□□□□□ -0.6
ZNF254-201ENST00000339642 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 CCER2I3L3R5 266 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 VAMP4O75379 141 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 CCDC93Q567U6 631 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 RTKN2Q8IZC4 609 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 TAOK3Q9H2K8 898 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 SH3TC1Q8TE82 1336 aa11.29□□□□□ -0.6
ZNF254-201ENST00000339642 GLTPD2A6NH11 291 aa11.28□□□□□ -0.6
ZNF254-201ENST00000339642 HCLS1P14317 486 aaPredicted RBP11.28□□□□□ -0.6
ZNF254-201ENST00000339642 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
ZNF254-201ENST00000339642 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
ZNF254-201ENST00000339642 OLFM4Q6UX06 510 aa11.28□□□□□ -0.6
ZNF254-201ENST00000339642 RIC3Q7Z5B4 369 aa11.28□□□□□ -0.6
ZNF254-201ENST00000339642 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
ZNF254-201ENST00000339642 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
ZNF254-201ENST00000339642 RBM17Q96I25 401 aaKnown RBP11.28□□□□□ -0.6
ZNF254-201ENST00000339642 PSMD1Q99460 953 aa11.28□□□□□ -0.6
ZNF254-201ENST00000339642 METTL22Q9BUU2 404 aaPredicted RBP11.28□□□□□ -0.6
ZNF254-201ENST00000339642 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
ZNF254-201ENST00000339642 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
ZNF254-201ENST00000339642 BBOX1O75936 387 aa11.27□□□□□ -0.61
ZNF254-201ENST00000339642 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.61
ZNF254-201ENST00000339642 FKBP4Q02790 459 aaKnown RBP eCLIP11.27□□□□□ -0.61
ZNF254-201ENST00000339642 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
ZNF254-201ENST00000339642 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
ZNF254-201ENST00000339642 CCDC191Q8NCU4 936 aa11.27□□□□□ -0.61
ZNF254-201ENST00000339642 FAM89AQ96GI7 184 aa11.27□□□□□ -0.61
ZNF254-201ENST00000339642 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.61
ZNF254-201ENST00000339642 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.61
ZNF254-201ENST00000339642 PI4KAP2A4QPH2 592 aa11.26□□□□□ -0.61
ZNF254-201ENST00000339642 EXOSC9Q06265 439 aaKnown RBP11.26□□□□□ -0.61
ZNF254-201ENST00000339642 G2E3Q7L622 706 aa11.26□□□□□ -0.61
ZNF254-201ENST00000339642 PI4KAP1Q8N8J0 262 aa11.26□□□□□ -0.61
ZNF254-201ENST00000339642 ZBTB38Q8NAP3 1195 aaPredicted RBP11.26□□□□□ -0.61
ZNF254-201ENST00000339642 STK31Q9BXU1 1019 aa11.26□□□□□ -0.61
ZNF254-201ENST00000339642 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
ZNF254-201ENST00000339642 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
ZNF254-201ENST00000339642 DICER1Q9UPY3 1922 aaKnown RBP11.25□□□□□ -0.61
ZNF254-201ENST00000339642 TOMM70O94826 608 aa11.25□□□□□ -0.61
ZNF254-201ENST00000339642 PCCAP05165 728 aaPredicted RBP11.25□□□□□ -0.61
ZNF254-201ENST00000339642 IGKV5-2P06315 115 aa11.25□□□□□ -0.61
ZNF254-201ENST00000339642 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
ZNF254-201ENST00000339642 MAP3K2Q9Y2U5 619 aa11.25□□□□□ -0.61
ZNF254-201ENST00000339642 ABCC4O15439 1325 aa11.25□□□□□ -0.61
ZNF254-201ENST00000339642 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
ZNF254-201ENST00000339642 POTECB2RU33 542 aa11.24□□□□□ -0.61
ZNF254-201ENST00000339642 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
ZNF254-201ENST00000339642 FLIIQ13045 1269 aa11.24□□□□□ -0.61
ZNF254-201ENST00000339642 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
ZNF254-201ENST00000339642 MYD88Q99836 296 aa11.24□□□□□ -0.61
ZNF254-201ENST00000339642 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
ZNF254-201ENST00000339642 VPS33BQ9H267 617 aa11.24□□□□□ -0.61
ZNF254-201ENST00000339642 RRAGCQ9HB90 399 aa11.24□□□□□ -0.61
ZNF254-201ENST00000339642 ZNF277Q9NRM2 450 aaPredicted RBP11.24□□□□□ -0.61
ZNF254-201ENST00000339642 CWC25Q9NXE8 425 aaPredicted RBP11.24□□□□□ -0.61
ZNF254-201ENST00000339642 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
ZNF254-201ENST00000339642 IRS4O14654 1257 aaPredicted RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 HSP90B1P14625 803 aaKnown RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 IARSP41252 1262 aaKnown RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 GRAPQ13588 217 aa11.23□□□□□ -0.61
ZNF254-201ENST00000339642 DDX46Q7L014 1031 aaKnown RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
ZNF254-201ENST00000339642 SLC51AQ86UW1 340 aa11.23□□□□□ -0.61
ZNF254-201ENST00000339642 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 RBM46Q8TBY0 533 aaKnown RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
ZNF254-201ENST00000339642 LAMB2P55268 1798 aa11.23□□□□□ -0.61
ZNF254-201ENST00000339642 E9PSI1 815 aa11.22□□□□□ -0.61
ZNF254-201ENST00000339642 FZD9O00144 591 aa11.22□□□□□ -0.61
ZNF254-201ENST00000339642 CACNA1FO60840 1977 aa11.22□□□□□ -0.61
ZNF254-201ENST00000339642 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
ZNF254-201ENST00000339642 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
ZNF254-201ENST00000339642 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
ZNF254-201ENST00000339642 L3MBTL3Q96JM7 780 aaPredicted RBP11.22□□□□□ -0.61
ZNF254-201ENST00000339642 CDHR2Q9BYE9 1310 aa11.22□□□□□ -0.61
ZNF254-201ENST00000339642 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
ZNF254-201ENST00000339642 NEURL1BA8MQ27 555 aa11.21□□□□□ -0.61
ZNF254-201ENST00000339642 H7C1W4 665 aa11.21□□□□□ -0.61
ZNF254-201ENST00000339642 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
ZNF254-201ENST00000339642 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
ZNF254-201ENST00000339642 WDR90Q96KV7 1748 aa11.21□□□□□ -0.62
ZNF254-201ENST00000339642 PDE8AO60658 829 aa11.2□□□□□ -0.62
ZNF254-201ENST00000339642 DDNO94850 711 aaPredicted RBP11.2□□□□□ -0.62
ZNF254-201ENST00000339642 CASP7P55210 303 aa11.2□□□□□ -0.62
ZNF254-201ENST00000339642 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
ZNF254-201ENST00000339642 FSTL1Q12841 308 aa11.2□□□□□ -0.62
ZNF254-201ENST00000339642 CWF19L2Q2TBE0 894 aaKnown RBP11.2□□□□□ -0.62
ZNF254-201ENST00000339642 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
ZNF254-201ENST00000339642 LINS1Q8NG48 757 aa11.2□□□□□ -0.62
ZNF254-201ENST00000339642 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
ZNF254-201ENST00000339642 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
ZNF254-201ENST00000339642 HSPA6P17066 643 aa11.19□□□□□ -0.62
ZNF254-201ENST00000339642 FKBP5Q13451 457 aaPredicted RBP11.19□□□□□ -0.62
ZNF254-201ENST00000339642 GCKRQ14397 625 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms