RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 NT5C2P49902 561 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 COPS6Q7L5N1 327 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 NLRP10Q86W26 655 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 PDIA4P13667 645 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 ARID4AP29374 1257 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 BAG6P46379 1132 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 PARP10Q53GL7 1025 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 LSG1Q9H089 658 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 HSPA4P34932 840 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 SF3B3Q15393 1217 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 TTC14Q96N46 770 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 HAUS7Q99871 368 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 ESYT1Q9BSJ8 1104 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 CWC25Q9NXE8 425 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 RIPOR2Q9Y4F9 1068 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 A0A087WZG4 1122 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 EXOC5O00471 708 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 LMOD2Q6P5Q4 547 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 TTC5Q8N0Z6 440 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 COL2A1P02458 1487 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 SGSM2O43147 1006 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 EVCP57679 992 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 ITPK1Q13572 414 aa6.62□□□□□ -1.35
PRPF4B-201ENST00000337659 THSD7BQ9C0I4 1608 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 SENP3-EIF4A1A0A087X0R7 540 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 FER1L6Q2WGJ9 1857 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 SLC27A3Q5K4L6 730 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 FAM196AQ6ZSG2 479 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 BCL2L12Q9HB09 334 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 ASAP1Q9ULH1 1129 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 COL1A1P02452 1464 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 SLC39A6Q13433 755 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 CCDC87Q9NVE4 849 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 GLRX3O76003 335 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 STARD3NLO95772 234 aa6.61□□□□□ -1.35
PRPF4B-201ENST00000337659 HIP1O00291 1037 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 SKAP1Q86WV1 359 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 IL15P40933 162 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 INTS4Q96HW7 963 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 C1orf115Q9H7X2 142 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 SALL1Q9NSC2 1324 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 ELL2O00472 640 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 DDB1Q16531 1140 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 TTLL7Q6ZT98 887 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 OTUD7AQ8TE49 926 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 EVI5LQ96CN4 794 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 NECTIN1Q15223 517 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 CWF19L2Q2TBE0 894 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 TNNI3KQ59H18 835 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 ANKRD45Q5TZF3 282 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 MORC2Q9Y6X9 1032 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 FPGT-TNNI3KV9GXZ4 949 aa6.6□□□□□ -1.35
PRPF4B-201ENST00000337659 RPS6KA4O75676 772 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 RABEP1Q15276 862 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 CRY2Q49AN0 593 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 LINC00116Q8NCU8 138 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 ECHDC1Q9NTX5 307 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 DICER1Q9UPY3 1922 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 WDR90Q96KV7 1748 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 LOC102724428A0A0B4J2F2 783 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 SOX12O15370 315 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 SIK1P57059 783 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 MAP4K1Q92918 833 aa6.59□□□□□ -1.35
PRPF4B-201ENST00000337659 ERC2O15083 957 aa6.59□□□□□ -1.36
PRPF4B-201ENST00000337659 TTLL11Q8NHH1 800 aa6.59□□□□□ -1.36
PRPF4B-201ENST00000337659 MTA3Q9BTC8 594 aa6.59□□□□□ -1.36
PRPF4B-201ENST00000337659 TBC1D2Q9BYX2 928 aa6.59□□□□□ -1.36
PRPF4B-201ENST00000337659 LNPKQ9C0E8 428 aa6.59□□□□□ -1.36
PRPF4B-201ENST00000337659 MROH5Q6ZUA9 1318 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 MCM2P49736 904 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 CTSWP56202 376 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 DNAJC10Q8IXB1 793 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 C16orf71Q8IYS4 520 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 EAF2Q96CJ1 260 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 EYA2O00167 538 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 FOXP2O15409 715 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 CSB-PGBD3P0DP91 1061 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 FGD1P98174 961 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 AKT1S1Q96B36 256 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 NARFQ9UHQ1 456 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 ROBO3Q96MS0 1386 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 SRGAP3O43295 1099 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 CRKLP46109 303 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 PDE8AO60658 829 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 TM4SF1P30408 202 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 MYD88Q99836 296 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 HELLSQ9NRZ9 838 aa6.58□□□□□ -1.36
PRPF4B-201ENST00000337659 FGRP09769 529 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 HSP90B1P14625 803 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 ANP32AP39687 249 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 ALX1Q15699 326 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 DBNLQ9UJU6 430 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 REC8O95072 547 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 A1BGP04217 495 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 IL25Q9H293 177 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms