RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
TRIM16-201ENST00000336708 A0A0D9SFI3 127 aa11.72□□□□□ -0.53
TRIM16-201ENST00000336708 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
TRIM16-201ENST00000336708 CREB3L3Q68CJ9 461 aa11.72□□□□□ -0.53
TRIM16-201ENST00000336708 LMBR1LQ6UX01 489 aa11.72□□□□□ -0.53
TRIM16-201ENST00000336708 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
TRIM16-201ENST00000336708 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
TRIM16-201ENST00000336708 ADCK5Q3MIX3 580 aa11.72□□□□□ -0.53
TRIM16-201ENST00000336708 PRPF40BQ6NWY9 871 aaKnown RBP11.72□□□□□ -0.53
TRIM16-201ENST00000336708 HAUS7Q99871 368 aa11.72□□□□□ -0.53
TRIM16-201ENST00000336708 CASTP20810 708 aaKnown RBP11.71□□□□□ -0.53
TRIM16-201ENST00000336708 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.53
TRIM16-201ENST00000336708 EVA1CP58658 441 aa11.71□□□□□ -0.53
TRIM16-201ENST00000336708 GPT2Q8TD30 523 aa11.71□□□□□ -0.53
TRIM16-201ENST00000336708 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.53
TRIM16-201ENST00000336708 TEX13AQ9BXU3 409 aaPredicted RBP11.71□□□□□ -0.53
TRIM16-201ENST00000336708 STRN4Q9NRL3 753 aa11.71□□□□□ -0.53
TRIM16-201ENST00000336708 ZNF609O15014 1411 aa11.71□□□□□ -0.53
TRIM16-201ENST00000336708 PALLDQ8WX93 1383 aa11.71□□□□□ -0.53
TRIM16-201ENST00000336708 SLC27A2O14975 620 aa11.71□□□□□ -0.54
TRIM16-201ENST00000336708 CIAO1O76071 339 aa11.71□□□□□ -0.54
TRIM16-201ENST00000336708 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.54
TRIM16-201ENST00000336708 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.54
TRIM16-201ENST00000336708 FSD1Q9BTV5 496 aa11.71□□□□□ -0.54
TRIM16-201ENST00000336708 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.54
TRIM16-201ENST00000336708 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.54
TRIM16-201ENST00000336708 NRAPQ86VF7 1730 aa11.71□□□□□ -0.54
TRIM16-201ENST00000336708 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 TMOD3Q9NYL9 352 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 BCL9O00512 1426 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 SH2B1Q9NRF2 756 aaPredicted RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 PDRG1Q9NUG6 133 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 CYP46A1Q9Y6A2 500 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 PRPF40AO75400 957 aaKnown RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 TAF5LO75529 589 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 IL15P40933 162 aaPredicted RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 TCIRG1Q13488 830 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 TMEM87AQ8NBN3 555 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 PIGBQ92521 554 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 JAKMIP1Q96N16 626 aaKnown RBP11.7□□□□□ -0.54
TRIM16-201ENST00000336708 DBNDD2Q9BQY9 259 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
TRIM16-201ENST00000336708 MYH3P11055 1940 aa11.69□□□□□ -0.54
TRIM16-201ENST00000336708 LAMA4Q16363 1823 aa11.69□□□□□ -0.54
TRIM16-201ENST00000336708 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
TRIM16-201ENST00000336708 RREB1Q92766 1687 aa11.69□□□□□ -0.54
TRIM16-201ENST00000336708 PSMA5P28066 241 aa11.69□□□□□ -0.54
TRIM16-201ENST00000336708 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
TRIM16-201ENST00000336708 ZNF589Q86UQ0 364 aaPredicted RBP11.69□□□□□ -0.54
TRIM16-201ENST00000336708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRIM16-201ENST00000336708 DOT1LQ8TEK3 1739 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 LARGE1O95461 756 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 ST3GAL1Q11201 340 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 ZBTB3Q9H5J0 574 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 SH3TC1Q8TE82 1336 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 TCHHQ07283 1943 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 NUP98P52948 1817 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 EYA2O00167 538 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 MBD3O95983 291 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 CPA1P15085 419 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 ANP32BQ92688 251 aaKnown RBP11.68□□□□□ -0.54
TRIM16-201ENST00000336708 BTG4Q9NY30 223 aa11.68□□□□□ -0.54
TRIM16-201ENST00000336708 NCLP19338 710 aaKnown RBP11.67□□□□□ -0.54
TRIM16-201ENST00000336708 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
TRIM16-201ENST00000336708 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
TRIM16-201ENST00000336708 PCCAP05165 728 aaPredicted RBP11.67□□□□□ -0.54
TRIM16-201ENST00000336708 CSF1RP07333 972 aa11.67□□□□□ -0.54
TRIM16-201ENST00000336708 KBTBD3Q8NAB2 608 aa11.67□□□□□ -0.54
TRIM16-201ENST00000336708 CHAMP1Q96JM3 812 aa11.67□□□□□ -0.54
TRIM16-201ENST00000336708 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
TRIM16-201ENST00000336708 CDHR2Q9BYE9 1310 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 ZSCAN22P10073 491 aaPredicted RBP11.66□□□□□ -0.54
TRIM16-201ENST00000336708 RPS6KB1P23443 525 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 CAVIN1Q6NZI2 390 aaKnown RBP11.66□□□□□ -0.54
TRIM16-201ENST00000336708 ME3Q16798 604 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 UQCRHLA0A096LP55 91 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 STX6O43752 255 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 UQCRHP07919 91 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
TRIM16-201ENST00000336708 SYT1P21579 422 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 ANKRD1Q15327 319 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 MCMDC2Q4G0Z9 681 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 NSFL1CQ9UNZ2 370 aaKnown RBP11.66□□□□□ -0.54
TRIM16-201ENST00000336708 LRP5O75197 1615 aa11.66□□□□□ -0.54
TRIM16-201ENST00000336708 MYH7P12883 1935 aa11.65□□□□□ -0.54
TRIM16-201ENST00000336708 KRT32Q14532 448 aa11.65□□□□□ -0.54
TRIM16-201ENST00000336708 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
TRIM16-201ENST00000336708 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
TRIM16-201ENST00000336708 TMEM63CQ9P1W3 806 aa11.65□□□□□ -0.54
TRIM16-201ENST00000336708 TPCN1Q9ULQ1 816 aa11.65□□□□□ -0.54
TRIM16-201ENST00000336708 SMC3Q9UQE7 1217 aa11.65□□□□□ -0.54
TRIM16-201ENST00000336708 U3KPZ7 1027 aaPredicted RBP11.65□□□□□ -0.54
TRIM16-201ENST00000336708 ARAP2Q8WZ64 1704 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms