RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
IFFO1-201ENST00000336604 LRP10Q7Z4F1 713 aa21.19■□□□□ 0.98
IFFO1-201ENST00000336604 PTPN12Q05209 780 aaKnown RBP21.18■□□□□ 0.98
IFFO1-201ENST00000336604 KIAA2012Q0VF49 1180 aa21.18■□□□□ 0.98
IFFO1-201ENST00000336604 PROSER2Q86WR7 435 aaPredicted RBP21.18■□□□□ 0.98
IFFO1-201ENST00000336604 COL15A1P39059 1388 aa21.18■□□□□ 0.98
IFFO1-201ENST00000336604 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
IFFO1-201ENST00000336604 PTCD1O75127 700 aaKnown RBP21.18■□□□□ 0.98
IFFO1-201ENST00000336604 TATP17735 454 aaPredicted RBP21.18■□□□□ 0.98
IFFO1-201ENST00000336604 COPRSQ9NQ92 184 aa21.18■□□□□ 0.98
IFFO1-201ENST00000336604 TRPM3Q9HCF6 1732 aaPredicted RBP21.17■□□□□ 0.98
IFFO1-201ENST00000336604 MEGF6O75095 1541 aa21.17■□□□□ 0.98
IFFO1-201ENST00000336604 RFX5P48382 616 aaPredicted RBP21.17■□□□□ 0.98
IFFO1-201ENST00000336604 ANKRD1Q15327 319 aa21.17■□□□□ 0.98
IFFO1-201ENST00000336604 TNNI3KQ59H18 835 aa21.17■□□□□ 0.98
IFFO1-201ENST00000336604 TTC12Q9H892 705 aaPredicted RBP21.17■□□□□ 0.98
IFFO1-201ENST00000336604 FPGT-TNNI3KV9GXZ4 949 aa21.17■□□□□ 0.98
IFFO1-201ENST00000336604 ZNF142P52746 1687 aaPredicted RBP21.16■□□□□ 0.98
IFFO1-201ENST00000336604 DYNC1I1O14576 645 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 KDM4AO75164 1064 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 KRT85P78386 507 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 C1orf167Q5SNV9 1468 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 CCDC129Q6ZRS4 1044 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 TTC5Q8N0Z6 440 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 SEC62Q99442 399 aaKnown RBP21.16■□□□□ 0.98
IFFO1-201ENST00000336604 DNAJC2Q99543 621 aaKnown RBP21.16■□□□□ 0.98
IFFO1-201ENST00000336604 MRC1P22897 1456 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 LMTK3Q96Q04 1460 aa21.16■□□□□ 0.98
IFFO1-201ENST00000336604 SNRPA1P09661 255 aaKnown RBP21.15■□□□□ 0.98
IFFO1-201ENST00000336604 ATP5JP18859 108 aa21.15■□□□□ 0.98
IFFO1-201ENST00000336604 SASS6Q6UVJ0 657 aa21.15■□□□□ 0.98
IFFO1-201ENST00000336604 CSB-PGBD3P0DP91 1061 aa21.15■□□□□ 0.98
IFFO1-201ENST00000336604 PDCP20941 246 aa21.15■□□□□ 0.98
IFFO1-201ENST00000336604 DNTTIP2Q5QJE6 756 aaKnown RBP21.15■□□□□ 0.98
IFFO1-201ENST00000336604 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
IFFO1-201ENST00000336604 HMG20BQ9P0W2 317 aa21.15■□□□□ 0.98
IFFO1-201ENST00000336604 JCADQ9P266 1359 aa21.15■□□□□ 0.98
IFFO1-201ENST00000336604 CCDC9Q9Y3X0 531 aaKnown RBP21.15■□□□□ 0.98
IFFO1-201ENST00000336604 CYP27B1O15528 508 aa21.14■□□□□ 0.98
IFFO1-201ENST00000336604 AP5Z1O43299 807 aa21.14■□□□□ 0.98
IFFO1-201ENST00000336604 CABLES1Q8TDN4 633 aa21.14■□□□□ 0.98
IFFO1-201ENST00000336604 LIG1P18858 919 aa21.14■□□□□ 0.97
IFFO1-201ENST00000336604 CAMK4Q16566 473 aa21.14■□□□□ 0.97
IFFO1-201ENST00000336604 DBNDD2Q9BQY9 259 aa21.14■□□□□ 0.97
IFFO1-201ENST00000336604 TFIP11Q9UBB9 837 aaKnown RBP21.14■□□□□ 0.97
IFFO1-201ENST00000336604 A0A087WZG4 1122 aa21.13■□□□□ 0.97
IFFO1-201ENST00000336604 TSGA10IPQ3SY00 556 aa21.13■□□□□ 0.97
IFFO1-201ENST00000336604 ZHX1Q9UKY1 873 aaPredicted RBP21.13■□□□□ 0.97
IFFO1-201ENST00000336604 CHRNA2Q15822 529 aa21.13■□□□□ 0.97
IFFO1-201ENST00000336604 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
IFFO1-201ENST00000336604 C17orf53Q8N3J3 647 aaPredicted RBP21.13■□□□□ 0.97
IFFO1-201ENST00000336604 TSC1Q92574 1164 aa21.13■□□□□ 0.97
IFFO1-201ENST00000336604 JAK2O60674 1132 aa21.12■□□□□ 0.97
IFFO1-201ENST00000336604 RABL6Q3YEC7 729 aaPredicted RBP21.12■□□□□ 0.97
IFFO1-201ENST00000336604 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
IFFO1-201ENST00000336604 ALDH8A1Q9H2A2 487 aaPredicted RBP21.12■□□□□ 0.97
IFFO1-201ENST00000336604 ZNF609O15014 1411 aa21.12■□□□□ 0.97
IFFO1-201ENST00000336604 SCN11AQ9UI33 1791 aa21.12■□□□□ 0.97
IFFO1-201ENST00000336604 C19orf44Q9H6X5 657 aa21.12■□□□□ 0.97
IFFO1-201ENST00000336604 CCDC192P0DO97 292 aa21.11■□□□□ 0.97
IFFO1-201ENST00000336604 DCAF5Q96JK2 942 aa21.11■□□□□ 0.97
IFFO1-201ENST00000336604 FMNL2Q96PY5 1086 aa21.11■□□□□ 0.97
IFFO1-201ENST00000336604 PODXL2Q9NZ53 605 aa21.11■□□□□ 0.97
IFFO1-201ENST00000336604 ELP1O95163 1332 aa21.11■□□□□ 0.97
IFFO1-201ENST00000336604 NEK1Q96PY6 1258 aa21.11■□□□□ 0.97
IFFO1-201ENST00000336604 PIBF1Q8WXW3 757 aa21.1■□□□□ 0.97
IFFO1-201ENST00000336604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.972e-7■■■■■ 28.3
IFFO1-201ENST00000336604 CYP21A2P08686 494 aa21.1■□□□□ 0.97
IFFO1-201ENST00000336604 PDIA4P13667 645 aaKnown RBP21.1■□□□□ 0.97
IFFO1-201ENST00000336604 MTERF4Q7Z6M4 381 aaKnown RBP21.1■□□□□ 0.97
IFFO1-201ENST00000336604 SPATA32Q96LK8 384 aa21.1■□□□□ 0.97
IFFO1-201ENST00000336604 LRRC2Q9BYS8 371 aa21.1■□□□□ 0.97
IFFO1-201ENST00000336604 NUP62CLQ9H1M0 184 aa21.1■□□□□ 0.97
IFFO1-201ENST00000336604 DACT1Q9NYF0 836 aa21.1■□□□□ 0.97
IFFO1-201ENST00000336604 KRT32Q14532 448 aa21.09■□□□□ 0.97
IFFO1-201ENST00000336604 SLFNL1Q499Z3 407 aa21.09■□□□□ 0.97
IFFO1-201ENST00000336604 LMBR1LQ6UX01 489 aa21.09■□□□□ 0.97
IFFO1-201ENST00000336604 SMAP1Q8IYB5 467 aaPredicted RBP21.09■□□□□ 0.97
IFFO1-201ENST00000336604 GTF3C6Q969F1 213 aa21.09■□□□□ 0.97
IFFO1-201ENST00000336604 MAP3K11Q16584 847 aa21.09■□□□□ 0.97
IFFO1-201ENST00000336604 CKAP2LQ8IYA6 745 aa21.09■□□□□ 0.97
IFFO1-201ENST00000336604 NOLC1Q14978 699 aaKnown RBP eCLIP21.08■□□□□ 0.97
IFFO1-201ENST00000336604 Q6ZUG5 572 aa21.08■□□□□ 0.97
IFFO1-201ENST00000336604 DDX11Q96FC9 970 aa21.08■□□□□ 0.97
IFFO1-201ENST00000336604 HAUS7Q99871 368 aa21.08■□□□□ 0.97
IFFO1-201ENST00000336604 SCAND2PQ9GZW5 306 aaPredicted RBP21.08■□□□□ 0.97
IFFO1-201ENST00000336604 GOLGA6L4A6NEF3 574 aa21.08■□□□□ 0.96
IFFO1-201ENST00000336604 CASP7P55210 303 aa21.08■□□□□ 0.96
IFFO1-201ENST00000336604 MCMDC2Q4G0Z9 681 aa21.08■□□□□ 0.96
IFFO1-201ENST00000336604 LEO1Q8WVC0 666 aaPredicted RBP21.08■□□□□ 0.96
IFFO1-201ENST00000336604 HSP90B1P14625 803 aaKnown RBP21.07■□□□□ 0.96
IFFO1-201ENST00000336604 CABP4P57796 275 aa21.07■□□□□ 0.96
IFFO1-201ENST00000336604 TYRO3Q06418 890 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 SPC24Q8NBT2 197 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 BRF1Q92994 677 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 MRVI1Q9Y6F6 885 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 U3KPZ7 1027 aaPredicted RBP21.06■□□□□ 0.96
IFFO1-201ENST00000336604 MST1RQ04912 1400 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 FAM177BA6PVY3 158 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 KLHL34Q8N239 644 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms