RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 XAGE3Q8WTP9 111 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 KRT23Q9C075 422 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 CFAP45Q9UL16 551 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 H7C1D1 291 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
EPHA3-201ENST00000336596 JAKMIP3Q5VZ66 844 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 LDHAL6AQ6ZMR3 332 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 C8orf58Q8NAV2 365 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 PRR36Q9H6K5 1346 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 PABPN1LA6NDY0 278 aaKnown RBP8.54□□□□□ -1.04
EPHA3-201ENST00000336596 EPB41L2O43491 1005 aaKnown RBP8.54□□□□□ -1.04
EPHA3-201ENST00000336596 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
EPHA3-201ENST00000336596 COPS6Q7L5N1 327 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 CCDC117Q8IWD4 279 aaPredicted RBP8.54□□□□□ -1.04
EPHA3-201ENST00000336596 ZHX3Q9H4I2 956 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 SPC25Q9HBM1 224 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 DDX49Q9Y6V7 483 aaKnown RBP8.54□□□□□ -1.04
EPHA3-201ENST00000336596 PPRC1Q5VV67 1664 aaKnown RBP8.54□□□□□ -1.04
EPHA3-201ENST00000336596 MBD3O95983 291 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 IVNS1ABPQ9Y6Y0 642 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 GNPATO15228 680 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 IPO9Q96P70 1041 aaKnown RBP8.54□□□□□ -1.04
EPHA3-201ENST00000336596 USP6P35125 1406 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 BMP15O95972 392 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 UBE3BQ7Z3V4 1068 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 GLT8D2Q9H1C3 349 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 ALKQ9UM73 1620 aa8.54□□□□□ -1.04
EPHA3-201ENST00000336596 ANKRD62A6NC57 917 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 ZBTB24O43167 697 aaPredicted RBP8.53□□□□□ -1.04
EPHA3-201ENST00000336596 CALM1P0DP23 149 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 CALM2P0DP24 149 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 CALM3P0DP25 149 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 C20orf194Q5TEA3 1177 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 PPM1FP49593 454 aaPredicted RBP8.53□□□□□ -1.04
EPHA3-201ENST00000336596 IQCEQ6IPM2 695 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 TTC6Q86TZ1 520 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 VPS36Q86VN1 386 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 TSHZ2Q9NRE2 1034 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 NOP2P46087 812 aaKnown RBP8.53□□□□□ -1.04
EPHA3-201ENST00000336596 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 ZNF213O14771 459 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 THRAP3Q9Y2W1 955 aaKnown RBP8.53□□□□□ -1.04
EPHA3-201ENST00000336596 SLC12A7Q9Y666 1083 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 CCDC194A0A1B0GVG4 234 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 LRSAM1Q6UWE0 723 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 DENND2AQ9ULE3 1009 aa8.53□□□□□ -1.04
EPHA3-201ENST00000336596 ELMSAN1Q6PJG2 1045 aa8.52□□□□□ -1.04
EPHA3-201ENST00000336596 TANGO6Q9C0B7 1094 aa8.52□□□□□ -1.04
EPHA3-201ENST00000336596 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.04
EPHA3-201ENST00000336596 SPINK5Q9NQ38 1064 aaPredicted RBP8.52□□□□□ -1.04
EPHA3-201ENST00000336596 KIAA0232Q92628 1395 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 MAP4K4O95819 1239 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-201ENST00000336596 SSRP1Q08945 709 aaKnown RBP8.52□□□□□ -1.05
EPHA3-201ENST00000336596 DCAF15Q66K64 600 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 ZNF397Q8NF99 534 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-201ENST00000336596 PIBF1Q8WXW3 757 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 CALML4Q96GE6 196 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 GRM1Q13255 1194 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-201ENST00000336596 CCDC82Q8N4S0 544 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-201ENST00000336596 RTL9Q8NET4 1388 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 ANKARQ7Z5J8 1434 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 IL15P40933 162 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-201ENST00000336596 BRINP3Q76B58 766 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 ARHGAP45Q92619 1136 aa8.52□□□□□ -1.05
EPHA3-201ENST00000336596 GPHNQ9NQX3 736 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-201ENST00000336596 MINDY4BA8MYZ0 360 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 EVI5LQ96CN4 794 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 PDRG1Q9NUG6 133 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 INSRP06213 1382 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 HMGN5P82970 282 aaKnown RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 NLGN1Q8N2Q7 840 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 TBC1D22AQ8WUA7 517 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 ARGLU1Q9NWB6 273 aaPredicted RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 GGA1Q9UJY5 639 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 ZC3H13Q5T200 1668 aaKnown RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 PTPRMP28827 1452 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 KSR2Q6VAB6 950 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 HOMER2Q9NSB8 354 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 HMG20BQ9P0W2 317 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 ADGRL3Q9HAR2 1447 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 WDR33Q9C0J8 1336 aaKnown RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 SSBP05455 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 CCDC172P0C7W6 258 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 LARGE2Q8N3Y3 721 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 QTRT2Q9H974 415 aaKnown RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 GJA3Q9Y6H8 435 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 TSPY2A6NKD2 308 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 RANBP6O60518 1105 aaKnown RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 TSPY3P0CV98 308 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 TSPY8P0CW00 308 aa8.51□□□□□ -1.05
EPHA3-201ENST00000336596 CASTP20810 708 aaKnown RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
EPHA3-201ENST00000336596 CC2D2BQ6DHV5 1058 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms