RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 A0A087WZG4 1122 aa27.89■■■□□ 2.06
NDEL1-201ENST00000334527 ZNF500O60304 480 aaPredicted RBP27.89■■■□□ 2.06
NDEL1-201ENST00000334527 HMG20BQ9P0W2 317 aa27.89■■■□□ 2.06
NDEL1-201ENST00000334527 TAF5LO75529 589 aa27.88■■■□□ 2.05
NDEL1-201ENST00000334527 LARP1BQ659C4 914 aaKnown RBP27.88■■■□□ 2.05
NDEL1-201ENST00000334527 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.88■■■□□ 2.05
NDEL1-201ENST00000334527 COL15A1P39059 1388 aa27.88■■■□□ 2.05
NDEL1-201ENST00000334527 PLEKHG2Q9H7P9 1386 aa27.88■■■□□ 2.05
NDEL1-201ENST00000334527 TNS3Q68CZ2 1445 aa27.87■■■□□ 2.05
NDEL1-201ENST00000334527 MCM5P33992 734 aa27.87■■■□□ 2.05
NDEL1-201ENST00000334527 NDUFB9Q9Y6M9 179 aa27.87■■■□□ 2.05
NDEL1-201ENST00000334527 PLBD2Q8NHP8 589 aa27.86■■■□□ 2.05
NDEL1-201ENST00000334527 ALDH8A1Q9H2A2 487 aaPredicted RBP27.86■■■□□ 2.05
NDEL1-201ENST00000334527 TOB2Q14106 344 aaPredicted RBP27.86■■■□□ 2.05
NDEL1-201ENST00000334527 UVSSAQ2YD98 709 aa27.86■■■□□ 2.05
NDEL1-201ENST00000334527 TSGA10IPQ3SY00 556 aa27.86■■■□□ 2.05
NDEL1-201ENST00000334527 DNAJC2Q99543 621 aaKnown RBP27.85■■■□□ 2.05
NDEL1-201ENST00000334527 DBNDD2Q9BQY9 259 aa27.85■■■□□ 2.05
NDEL1-201ENST00000334527 PTMAP06454 111 aaKnown RBP27.85■■■□□ 2.05
NDEL1-201ENST00000334527 DCCP43146 1447 aa27.84■■■□□ 2.05
NDEL1-201ENST00000334527 LAMB4A4D0S4 1761 aa27.84■■■□□ 2.05
NDEL1-201ENST00000334527 CASP7P55210 303 aa27.84■■■□□ 2.05
NDEL1-201ENST00000334527 USPL1Q5W0Q7 1092 aa27.84■■■□□ 2.05
NDEL1-201ENST00000334527 GLI3P10071 1580 aa27.84■■■□□ 2.05
NDEL1-201ENST00000334527 PDIA4P13667 645 aaKnown RBP27.84■■■□□ 2.05
NDEL1-201ENST00000334527 PDCP20941 246 aa27.84■■■□□ 2.05
NDEL1-201ENST00000334527 CDC37L1Q7L3B6 337 aa27.84■■■□□ 2.05
NDEL1-201ENST00000334527 TPM2P07951 284 aa27.83■■■□□ 2.05
NDEL1-201ENST00000334527 HCLS1P14317 486 aaPredicted RBP27.83■■■□□ 2.05
NDEL1-201ENST00000334527 LMBR1LQ6UX01 489 aa27.82■■■□□ 2.04
NDEL1-201ENST00000334527 ZNF609O15014 1411 aa27.82■■■□□ 2.04
NDEL1-201ENST00000334527 KRT32Q14532 448 aa27.82■■■□□ 2.04
NDEL1-201ENST00000334527 FERMT3Q86UX7 667 aa27.82■■■□□ 2.04
NDEL1-201ENST00000334527 RFX7Q2KHR2 1363 aa27.82■■■□□ 2.04
NDEL1-201ENST00000334527 STK3Q13188 491 aa27.81■■■□□ 2.04
NDEL1-201ENST00000334527 HAUS7Q99871 368 aa27.81■■■□□ 2.04
NDEL1-201ENST00000334527 STRCP1A6NGW2 1772 aa27.81■■■□□ 2.04
NDEL1-201ENST00000334527 CHGBP05060 677 aa27.81■■■□□ 2.04
NDEL1-201ENST00000334527 GIMAP6Q6P9H5 292 aa27.81■■■□□ 2.04
NDEL1-201ENST00000334527 CCDC129Q6ZRS4 1044 aa27.81■■■□□ 2.04
NDEL1-201ENST00000334527 USP25Q9UHP3 1055 aa27.81■■■□□ 2.04
NDEL1-201ENST00000334527 KRT85P78386 507 aa27.8■■■□□ 2.04
NDEL1-201ENST00000334527 CHMP3Q9Y3E7 222 aa27.8■■■□□ 2.04
NDEL1-201ENST00000334527 SEC62Q99442 399 aaKnown RBP27.8■■■□□ 2.04
NDEL1-201ENST00000334527 DDX46Q7L014 1031 aaKnown RBP27.79■■■□□ 2.04
NDEL1-201ENST00000334527 CADPS2Q86UW7 1296 aa27.79■■■□□ 2.04
NDEL1-201ENST00000334527 SPATA31A3Q5VYP0 1347 aa27.79■■■□□ 2.04
NDEL1-201ENST00000334527 PARP4Q9UKK3 1724 aaKnown RBP27.79■■■□□ 2.04
NDEL1-201ENST00000334527 NBPF26B4DH59 902 aa27.79■■■□□ 2.04
NDEL1-201ENST00000334527 NBPF14Q5TI25 921 aa27.79■■■□□ 2.04
NDEL1-201ENST00000334527 NBPF10Q6P3W6 841 aaKnown RBP27.79■■■□□ 2.04
NDEL1-201ENST00000334527 NBPF15Q8N660 670 aa27.79■■■□□ 2.04
NDEL1-201ENST00000334527 CCDC9Q9Y3X0 531 aaKnown RBP27.79■■■□□ 2.04
NDEL1-201ENST00000334527 U3KPZ7 1027 aaPredicted RBP27.79■■■□□ 2.04
NDEL1-201ENST00000334527 CPDO75976 1380 aa27.78■■■□□ 2.04
NDEL1-201ENST00000334527 FOXO4P98177 505 aa27.78■■■□□ 2.04
NDEL1-201ENST00000334527 MCMDC2Q4G0Z9 681 aa27.78■■■□□ 2.04
NDEL1-201ENST00000334527 TTC6Q86TZ1 520 aa27.78■■■□□ 2.04
NDEL1-201ENST00000334527 NEK1Q96PY6 1258 aa27.78■■■□□ 2.04
NDEL1-201ENST00000334527 FUCA2Q9BTY2 467 aa27.78■■■□□ 2.04
NDEL1-201ENST00000334527 FAM173BQ6P4H8 233 aa27.78■■■□□ 2.04
NDEL1-201ENST00000334527 H7C1W4 665 aa27.77■■■□□ 2.04
NDEL1-201ENST00000334527 KLHL34Q8N239 644 aa27.77■■■□□ 2.04
NDEL1-201ENST00000334527 TTLL7Q6ZT98 887 aa27.75■■■□□ 2.03
NDEL1-201ENST00000334527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.75■■■□□ 2.03
NDEL1-201ENST00000334527 ADCY5O95622 1261 aa27.75■■■□□ 2.03
NDEL1-201ENST00000334527 KBTBD3Q8NAB2 608 aa27.75■■■□□ 2.03
NDEL1-201ENST00000334527 ELP1O95163 1332 aa27.75■■■□□ 2.03
NDEL1-201ENST00000334527 CYP21A2P08686 494 aa27.74■■■□□ 2.03
NDEL1-201ENST00000334527 NEUROD6Q96NK8 337 aa27.74■■■□□ 2.03
NDEL1-201ENST00000334527 CWC25Q9NXE8 425 aaPredicted RBP27.74■■■□□ 2.03
NDEL1-201ENST00000334527 R3HCC1Q9Y3T6 440 aaKnown RBP27.74■■■□□ 2.03
NDEL1-201ENST00000334527 ATG9AQ7Z3C6 839 aa27.74■■■□□ 2.03
NDEL1-201ENST00000334527 GTF3C6Q969F1 213 aa27.74■■■□□ 2.03
NDEL1-201ENST00000334527 Q6ZUG5 572 aa27.73■■■□□ 2.03
NDEL1-201ENST00000334527 PCDH11XQ9BZA7 1347 aa27.73■■■□□ 2.03
NDEL1-201ENST00000334527 PCDH11YQ9BZA8 1340 aa27.73■■■□□ 2.03
NDEL1-201ENST00000334527 NUP188Q5SRE5 1749 aa27.72■■■□□ 2.03
NDEL1-201ENST00000334527 SH3TC1Q8TE82 1336 aa27.72■■■□□ 2.03
NDEL1-201ENST00000334527 KDM4AO75164 1064 aa27.72■■■□□ 2.03
NDEL1-201ENST00000334527 HSP90B1P14625 803 aaKnown RBP27.72■■■□□ 2.03
NDEL1-201ENST00000334527 TERF1P54274 439 aa27.72■■■□□ 2.03
NDEL1-201ENST00000334527 ZCRB1Q8TBF4 217 aaKnown RBP27.72■■■□□ 2.03
NDEL1-201ENST00000334527 GOLIM4O00461 696 aa27.71■■■□□ 2.03
NDEL1-201ENST00000334527 JAK2O60674 1132 aa27.71■■■□□ 2.03
NDEL1-201ENST00000334527 MPNDQ8N594 471 aa27.71■■■□□ 2.03
NDEL1-201ENST00000334527 A1BGP04217 495 aa27.71■■■□□ 2.03
NDEL1-201ENST00000334527 SCAND2PQ9GZW5 306 aaPredicted RBP27.71■■■□□ 2.03
NDEL1-201ENST00000334527 PAG1Q9NWQ8 432 aa27.71■■■□□ 2.03
NDEL1-201ENST00000334527 PALLDQ8WX93 1383 aa27.7■■■□□ 2.03
NDEL1-201ENST00000334527 TIMM10P62072 90 aa27.7■■■□□ 2.03
NDEL1-201ENST00000334527 TJP1Q07157 1748 aa27.7■■■□□ 2.02
NDEL1-201ENST00000334527 LIG1P18858 919 aa27.7■■■□□ 2.02
NDEL1-201ENST00000334527 KIAA2012Q0VF49 1180 aa27.7■■■□□ 2.02
NDEL1-201ENST00000334527 TOM1L2Q6ZVM7 507 aa27.7■■■□□ 2.02
NDEL1-201ENST00000334527 SPATA32Q96LK8 384 aa27.7■■■□□ 2.02
NDEL1-201ENST00000334527 ZBTB3Q9H5J0 574 aa27.7■■■□□ 2.02
NDEL1-201ENST00000334527 TFIP11Q9UBB9 837 aaKnown RBP27.7■■■□□ 2.02
NDEL1-201ENST00000334527 UBR2Q8IWV8 1755 aa27.69■■■□□ 2.02
NDEL1-201ENST00000334527 CCDC192P0DO97 292 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms