RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ZNF335Q9H4Z2 1342 aaPredicted RBP22.66■■□□□ 1.22
RFTN1-201ENST00000334133 COL15A1P39059 1388 aa22.66■■□□□ 1.22
RFTN1-201ENST00000334133 FOXO4P98177 505 aa22.65■■□□□ 1.22
RFTN1-201ENST00000334133 SLAIN2Q9P270 581 aa22.65■■□□□ 1.22
RFTN1-201ENST00000334133 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
RFTN1-201ENST00000334133 F13A1P00488 732 aa22.65■■□□□ 1.22
RFTN1-201ENST00000334133 LRRC24Q50LG9 513 aa22.65■■□□□ 1.22
RFTN1-201ENST00000334133 FAM173BQ6P4H8 233 aa22.65■■□□□ 1.22
RFTN1-201ENST00000334133 BLOC1S2Q6QNY1 142 aa22.65■■□□□ 1.22
RFTN1-201ENST00000334133 CPDO75976 1380 aa22.64■■□□□ 1.22
RFTN1-201ENST00000334133 ATP5JP18859 108 aa22.64■■□□□ 1.22
RFTN1-201ENST00000334133 DNM1Q05193 864 aaKnown RBP22.64■■□□□ 1.22
RFTN1-201ENST00000334133 TAF5LO75529 589 aa22.64■■□□□ 1.21
RFTN1-201ENST00000334133 CWC25Q9NXE8 425 aaPredicted RBP22.64■■□□□ 1.21
RFTN1-201ENST00000334133 IL2RBP14784 551 aa22.63■■□□□ 1.21
RFTN1-201ENST00000334133 CLCN1P35523 988 aa22.63■■□□□ 1.21
RFTN1-201ENST00000334133 KCNB2Q92953 911 aa22.63■■□□□ 1.21
RFTN1-201ENST00000334133 TM6SF1Q9BZW5 370 aa22.63■■□□□ 1.21
RFTN1-201ENST00000334133 MRC1P22897 1456 aa22.63■■□□□ 1.21
RFTN1-201ENST00000334133 LRRC2Q9BYS8 371 aa22.63■■□□□ 1.21
RFTN1-201ENST00000334133 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
RFTN1-201ENST00000334133 GOLIM4O00461 696 aa22.62■■□□□ 1.21
RFTN1-201ENST00000334133 PPP1R9BQ96SB3 815 aa22.62■■□□□ 1.21
RFTN1-201ENST00000334133 PUS3Q9BZE2 481 aaKnown RBP22.62■■□□□ 1.21
RFTN1-201ENST00000334133 MED23Q9ULK4 1368 aa22.62■■□□□ 1.21
RFTN1-201ENST00000334133 ARFGEF2Q9Y6D5 1785 aa22.62■■□□□ 1.21
RFTN1-201ENST00000334133 MTMR6Q9Y217 621 aa22.62■■□□□ 1.21
RFTN1-201ENST00000334133 H7C1W4 665 aa22.62■■□□□ 1.21
RFTN1-201ENST00000334133 ATG9AQ7Z3C6 839 aa22.61■■□□□ 1.21
RFTN1-201ENST00000334133 RNF20Q5VTR2 975 aa22.61■■□□□ 1.21
RFTN1-201ENST00000334133 NAP1L5Q96NT1 182 aaPredicted RBP22.61■■□□□ 1.21
RFTN1-201ENST00000334133 ZNF609O15014 1411 aa22.6■■□□□ 1.21
RFTN1-201ENST00000334133 PSMA5P28066 241 aa22.6■■□□□ 1.21
RFTN1-201ENST00000334133 MPNDQ8N594 471 aa22.6■■□□□ 1.21
RFTN1-201ENST00000334133 PKD1L3Q7Z443 1732 aa22.6■■□□□ 1.21
RFTN1-201ENST00000334133 LARP1BQ659C4 914 aaKnown RBP22.59■■□□□ 1.21
RFTN1-201ENST00000334133 ZSCAN31Q96LW9 406 aaPredicted RBP22.59■■□□□ 1.21
RFTN1-201ENST00000334133 ASAP1Q9ULH1 1129 aa22.59■■□□□ 1.21
RFTN1-201ENST00000334133 PPFIA3O75145 1194 aa22.59■■□□□ 1.21
RFTN1-201ENST00000334133 RPS6KB1P23443 525 aa22.59■■□□□ 1.21
RFTN1-201ENST00000334133 TOB2Q14106 344 aaPredicted RBP22.59■■□□□ 1.21
RFTN1-201ENST00000334133 SH2B1Q9NRF2 756 aaPredicted RBP22.59■■□□□ 1.21
RFTN1-201ENST00000334133 A0A0G2JLW4 131 aa22.59■■□□□ 1.21
RFTN1-201ENST00000334133 ERVV-2B6SEH9 535 aa22.58■■□□□ 1.21
RFTN1-201ENST00000334133 CDC37L1Q7L3B6 337 aa22.58■■□□□ 1.21
RFTN1-201ENST00000334133 SYNE4Q8N205 404 aa22.58■■□□□ 1.21
RFTN1-201ENST00000334133 COL5A2P05997 1499 aaPredicted RBP22.58■■□□□ 1.21
RFTN1-201ENST00000334133 HAUS7Q99871 368 aa22.58■■□□□ 1.2
RFTN1-201ENST00000334133 GLI3P10071 1580 aa22.58■■□□□ 1.2
RFTN1-201ENST00000334133 TSPY26PQ9H489 355 aa22.57■■□□□ 1.2
RFTN1-201ENST00000334133 SNRKQ9NRH2 765 aa22.57■■□□□ 1.2
RFTN1-201ENST00000334133 FAM89AQ96GI7 184 aa22.57■■□□□ 1.2
RFTN1-201ENST00000334133 CYP21A2P08686 494 aa22.56■■□□□ 1.2
RFTN1-201ENST00000334133 DNAJC10Q8IXB1 793 aa22.56■■□□□ 1.2
RFTN1-201ENST00000334133 SYAP1Q96A49 352 aaPredicted RBP22.56■■□□□ 1.2
RFTN1-201ENST00000334133 CARD10Q9BWT7 1032 aa22.56■■□□□ 1.2
RFTN1-201ENST00000334133 TMOD3Q9NYL9 352 aa22.56■■□□□ 1.2
RFTN1-201ENST00000334133 SOS2Q07890 1332 aaPredicted RBP22.55■■□□□ 1.2
RFTN1-201ENST00000334133 JAK2O60674 1132 aa22.55■■□□□ 1.2
RFTN1-201ENST00000334133 FOSBP53539 338 aa22.55■■□□□ 1.2
RFTN1-201ENST00000334133 XIRP1Q702N8 1843 aaKnown RBP22.55■■□□□ 1.2
RFTN1-201ENST00000334133 MCMDC2Q4G0Z9 681 aa22.55■■□□□ 1.2
RFTN1-201ENST00000334133 HSP90B1P14625 803 aaKnown RBP22.54■■□□□ 1.2
RFTN1-201ENST00000334133 GPTP24298 496 aa22.54■■□□□ 1.2
RFTN1-201ENST00000334133 PAG1Q9NWQ8 432 aa22.54■■□□□ 1.2
RFTN1-201ENST00000334133 A0A1B0GUL7 405 aa22.54■■□□□ 1.2
RFTN1-201ENST00000334133 DDX11Q96FC9 970 aa22.54■■□□□ 1.2
RFTN1-201ENST00000334133 NEK1Q96PY6 1258 aa22.54■■□□□ 1.2
RFTN1-201ENST00000334133 FKBP4Q02790 459 aaKnown RBP eCLIP22.53■■□□□ 1.2
RFTN1-201ENST00000334133 Q6ZUG5 572 aa22.53■■□□□ 1.2
RFTN1-201ENST00000334133 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
RFTN1-201ENST00000334133 HSP90AB3PQ58FF7 597 aa22.53■■□□□ 1.2
RFTN1-201ENST00000334133 TFIP11Q9UBB9 837 aaKnown RBP22.53■■□□□ 1.2
RFTN1-201ENST00000334133 EYA2O00167 538 aa22.53■■□□□ 1.2
RFTN1-201ENST00000334133 FGD1P98174 961 aa22.53■■□□□ 1.2
RFTN1-201ENST00000334133 GIMAP6Q6P9H5 292 aa22.53■■□□□ 1.2
RFTN1-201ENST00000334133 CCDC191Q8NCU4 936 aa22.53■■□□□ 1.2
RFTN1-201ENST00000334133 SYTL4Q96C24 671 aaPredicted RBP22.53■■□□□ 1.2
RFTN1-201ENST00000334133 UBE2HP62256 183 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 STOX1Q6ZVD7 989 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 CHST3Q7LGC8 479 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 PIGBQ92521 554 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 ATP6V1DQ9Y5K8 247 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 A0A0G2JS52 829 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 ADORA1P30542 326 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 BTG4Q9NY30 223 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
RFTN1-201ENST00000334133 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
RFTN1-201ENST00000334133 IFIT1P09914 478 aaKnown RBP22.51■■□□□ 1.19
RFTN1-201ENST00000334133 ZSCAN30Q86W11 494 aa22.51■■□□□ 1.19
RFTN1-201ENST00000334133 BRF1Q92994 677 aa22.51■■□□□ 1.19
RFTN1-201ENST00000334133 IL15P40933 162 aaPredicted RBP22.51■■□□□ 1.19
RFTN1-201ENST00000334133 NKX1-1Q15270 411 aaPredicted RBP22.51■■□□□ 1.19
RFTN1-201ENST00000334133 TMEM87AQ8NBN3 555 aa22.51■■□□□ 1.19
RFTN1-201ENST00000334133 HCLS1P14317 486 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-201ENST00000334133 USPL1Q5W0Q7 1092 aa22.5■■□□□ 1.19
RFTN1-201ENST00000334133 HMG20BQ9P0W2 317 aa22.5■■□□□ 1.19
RFTN1-201ENST00000334133 CCDC57Q2TAC2 916 aa22.5■■□□□ 1.19
RFTN1-201ENST00000334133 MSNP26038 577 aaKnown RBP22.5■■□□□ 1.19
RFTN1-201ENST00000334133 CCDC183Q5T5S1 534 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms