RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 COL11A2P13942 1736 aaPredicted RBP20.68■□□□□ 0.9
SHOX-201ENST00000334060 RABL6Q3YEC7 729 aaPredicted RBP20.68■□□□□ 0.9
SHOX-201ENST00000334060 IBTKQ9P2D0 1353 aaPredicted RBP20.68■□□□□ 0.9
SHOX-201ENST00000334060 SLC16A10Q8TF71 515 aa20.67■□□□□ 0.9
SHOX-201ENST00000334060 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
SHOX-201ENST00000334060 PDE8AO60658 829 aa20.66■□□□□ 0.9
SHOX-201ENST00000334060 CHRNA5P30532 468 aa20.66■□□□□ 0.9
SHOX-201ENST00000334060 RFX5P48382 616 aaPredicted RBP20.66■□□□□ 0.9
SHOX-201ENST00000334060 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
SHOX-201ENST00000334060 PLA2G12BQ9BX93 195 aa20.66■□□□□ 0.9
SHOX-201ENST00000334060 NYXQ9GZU5 481 aa20.66■□□□□ 0.9
SHOX-201ENST00000334060 MYH3P11055 1940 aa20.65■□□□□ 0.9
SHOX-201ENST00000334060 CSF1RP07333 972 aa20.65■□□□□ 0.9
SHOX-201ENST00000334060 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
SHOX-201ENST00000334060 PUS3Q9BZE2 481 aaKnown RBP20.65■□□□□ 0.9
SHOX-201ENST00000334060 BCL11AQ9H165 835 aa20.65■□□□□ 0.9
SHOX-201ENST00000334060 SIL1Q9H173 461 aa20.65■□□□□ 0.9
SHOX-201ENST00000334060 KLHL34Q8N239 644 aa20.64■□□□□ 0.89
SHOX-201ENST00000334060 EXOC6BQ9Y2D4 811 aa20.64■□□□□ 0.89
SHOX-201ENST00000334060 APBB1O00213 710 aa20.63■□□□□ 0.89
SHOX-201ENST00000334060 POLA2Q14181 598 aa20.63■□□□□ 0.89
SHOX-201ENST00000334060 CELF1Q92879 486 aaKnown RBP20.63■□□□□ 0.89
SHOX-201ENST00000334060 PPP1R1BQ9UD71 204 aaPredicted RBP20.63■□□□□ 0.89
SHOX-201ENST00000334060 C10orf71Q711Q0 1435 aa20.63■□□□□ 0.89
SHOX-201ENST00000334060 ITGA6P23229 1130 aa20.63■□□□□ 0.89
SHOX-201ENST00000334060 ST5P78524 1137 aa20.63■□□□□ 0.89
SHOX-201ENST00000334060 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
SHOX-201ENST00000334060 WTIPA6NIX2 430 aaPredicted RBP20.62■□□□□ 0.89
SHOX-201ENST00000334060 PTPN12Q05209 780 aaKnown RBP20.62■□□□□ 0.89
SHOX-201ENST00000334060 MTX1Q13505 466 aa20.62■□□□□ 0.89
SHOX-201ENST00000334060 OLFM4Q6UX06 510 aa20.62■□□□□ 0.89
SHOX-201ENST00000334060 SSH3Q8TE77 659 aa20.62■□□□□ 0.89
SHOX-201ENST00000334060 LRRC24Q50LG9 513 aa20.61■□□□□ 0.89
SHOX-201ENST00000334060 NLRP3Q96P20 1036 aa20.61■□□□□ 0.89
SHOX-201ENST00000334060 SF3B3Q15393 1217 aaKnown RBP20.6■□□□□ 0.89
SHOX-201ENST00000334060 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
SHOX-201ENST00000334060 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 CRY2Q49AN0 593 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 RPAP2Q8IXW5 612 aaPredicted RBP20.59■□□□□ 0.89
SHOX-201ENST00000334060 NLGN2Q8NFZ4 835 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 BRIP1Q9BX63 1249 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 SNAP23O00161 211 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 CCDC136Q96JN2 1154 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
SHOX-201ENST00000334060 SMARCA5O60264 1052 aaPredicted RBP20.58■□□□□ 0.89
SHOX-201ENST00000334060 KLRG2A4D1S0 409 aaPredicted RBP20.57■□□□□ 0.88
SHOX-201ENST00000334060 SRGNP10124 158 aa20.57■□□□□ 0.88
SHOX-201ENST00000334060 POLD1P28340 1107 aa20.57■□□□□ 0.88
SHOX-201ENST00000334060 SPON1Q9HCB6 807 aa20.57■□□□□ 0.88
SHOX-201ENST00000334060 KCNA3P22001 575 aa20.57■□□□□ 0.88
SHOX-201ENST00000334060 C2CD5Q86YS7 1000 aa20.57■□□□□ 0.88
SHOX-201ENST00000334060 CACNA1SQ13698 1873 aa20.57■□□□□ 0.88
SHOX-201ENST00000334060 SURF6O75683 361 aaKnown RBP20.56■□□□□ 0.88
SHOX-201ENST00000334060 DPEP1P16444 411 aa20.56■□□□□ 0.88
SHOX-201ENST00000334060 IFIT5Q13325 482 aaKnown RBP20.56■□□□□ 0.88
SHOX-201ENST00000334060 HDAC1Q13547 482 aaPredicted RBP20.56■□□□□ 0.88
SHOX-201ENST00000334060 CCDC152Q4G0S7 254 aa20.56■□□□□ 0.88
SHOX-201ENST00000334060 ATG9AQ7Z3C6 839 aa20.56■□□□□ 0.88
SHOX-201ENST00000334060 RIC1Q4ADV7 1423 aa20.56■□□□□ 0.88
SHOX-201ENST00000334060 CCDC57Q2TAC2 916 aa20.55■□□□□ 0.88
SHOX-201ENST00000334060 HELBQ8NG08 1087 aaPredicted RBP20.55■□□□□ 0.88
SHOX-201ENST00000334060 LRP5O75197 1615 aa20.55■□□□□ 0.88
SHOX-201ENST00000334060 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
SHOX-201ENST00000334060 ZNF219Q9P2Y4 722 aaPredicted RBP20.55■□□□□ 0.88
SHOX-201ENST00000334060 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
SHOX-201ENST00000334060 SASH1O94885 1247 aa20.54■□□□□ 0.88
SHOX-201ENST00000334060 ANKRD18BA2A2Z9 1011 aa20.54■□□□□ 0.88
SHOX-201ENST00000334060 ZNF622Q969S3 477 aaKnown RBP eCLIP20.54■□□□□ 0.88
SHOX-201ENST00000334060 DCTPP1Q9H773 170 aa20.54■□□□□ 0.88
SHOX-201ENST00000334060 IL1RAPL2Q9NP60 686 aa20.54■□□□□ 0.88
SHOX-201ENST00000334060 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
SHOX-201ENST00000334060 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
SHOX-201ENST00000334060 FHDC1Q9C0D6 1143 aaPredicted RBP20.53■□□□□ 0.88
SHOX-201ENST00000334060 COPRSQ9NQ92 184 aa20.53■□□□□ 0.88
SHOX-201ENST00000334060 OTUD7AQ8TE49 926 aaPredicted RBP20.52■□□□□ 0.88
SHOX-201ENST00000334060 SLX4Q8IY92 1834 aa20.52■□□□□ 0.88
SHOX-201ENST00000334060 TAF5LO75529 589 aa20.52■□□□□ 0.87
SHOX-201ENST00000334060 C16orf71Q8IYS4 520 aaPredicted RBP20.52■□□□□ 0.87
SHOX-201ENST00000334060 RTL9Q8NET4 1388 aa20.51■□□□□ 0.87
SHOX-201ENST00000334060 PDE6BP35913 854 aa20.51■□□□□ 0.87
SHOX-201ENST00000334060 ERICH6BQ5W0A0 696 aa20.51■□□□□ 0.87
SHOX-201ENST00000334060 LDHAL6AQ6ZMR3 332 aa20.51■□□□□ 0.87
SHOX-201ENST00000334060 DDX46Q7L014 1031 aaKnown RBP20.51■□□□□ 0.87
SHOX-201ENST00000334060 RWDD1Q9H446 243 aaPredicted RBP20.51■□□□□ 0.87
SHOX-201ENST00000334060 TFCP2Q12800 502 aa20.5■□□□□ 0.87
SHOX-201ENST00000334060 AAMPQ13685 434 aa20.5■□□□□ 0.87
SHOX-201ENST00000334060 TAF7LQ5H9L4 462 aa20.5■□□□□ 0.87
SHOX-201ENST00000334060 GPR101Q96P66 508 aaPredicted RBP20.5■□□□□ 0.87
SHOX-201ENST00000334060 RIPOR2Q9Y4F9 1068 aa20.5■□□□□ 0.87
SHOX-201ENST00000334060 HOXA10P31260 410 aaPredicted RBP20.5■□□□□ 0.87
SHOX-201ENST00000334060 GRAPQ13588 217 aa20.5■□□□□ 0.87
SHOX-201ENST00000334060 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
SHOX-201ENST00000334060 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
SHOX-201ENST00000334060 NOP58Q9Y2X3 529 aaKnown RBP20.5■□□□□ 0.87
SHOX-201ENST00000334060 H0YIN7 160 aa20.49■□□□□ 0.87
SHOX-201ENST00000334060 EYA2O00167 538 aa20.49■□□□□ 0.87
SHOX-201ENST00000334060 RPS8P62241 208 aaKnown RBP20.49■□□□□ 0.87
SHOX-201ENST00000334060 HMMRO75330 724 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 ANKRD18AQ8IVF6 992 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms