RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 TLR7Q9NYK1 1049 aaKnown RBP13.09□□□□□ -0.31
CCDC87-201ENST00000333861 DIP2AQ14689 1571 aa13.08□□□□□ -0.31
CCDC87-201ENST00000333861 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
CCDC87-201ENST00000333861 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
CCDC87-201ENST00000333861 PLA2G4DQ86XP0 818 aa13.08□□□□□ -0.32
CCDC87-201ENST00000333861 ATP7BP35670 1465 aa13.08□□□□□ -0.32
CCDC87-201ENST00000333861 CCDC69A6NI79 296 aa13.08□□□□□ -0.32
CCDC87-201ENST00000333861 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
CCDC87-201ENST00000333861 FHOD1Q9Y613 1164 aa13.08□□□□□ -0.32
CCDC87-201ENST00000333861 ANKRD65E5RJM6 399 aa13.07□□□□□ -0.32
CCDC87-201ENST00000333861 ARHGAP29Q52LW3 1261 aa13.07□□□□□ -0.32
CCDC87-201ENST00000333861 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
CCDC87-201ENST00000333861 SMARCE1Q969G3 411 aa13.07□□□□□ -0.32
CCDC87-201ENST00000333861 SLU7O95391 586 aaKnown RBP13.07□□□□□ -0.32
CCDC87-201ENST00000333861 SYCP1Q15431 976 aa13.07□□□□□ -0.32
CCDC87-201ENST00000333861 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
CCDC87-201ENST00000333861 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.07□□□□□ -0.32
CCDC87-201ENST00000333861 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
CCDC87-201ENST00000333861 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
CCDC87-201ENST00000333861 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
CCDC87-201ENST00000333861 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 PNMA6AP0CW24 399 aaPredicted RBP13.06□□□□□ -0.32
CCDC87-201ENST00000333861 ANAPC15P60006 121 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 KRT85P78386 507 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 KIF1BPQ96EK5 621 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
CCDC87-201ENST00000333861 CCT2P78371 535 aaKnown RBP13.06□□□□□ -0.32
CCDC87-201ENST00000333861 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
CCDC87-201ENST00000333861 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
CCDC87-201ENST00000333861 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
CCDC87-201ENST00000333861 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
CCDC87-201ENST00000333861 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
CCDC87-201ENST00000333861 ZSWIM4Q9H7M6 989 aa13.05□□□□□ -0.32
CCDC87-201ENST00000333861 PTPRCP08575 1304 aa13.05□□□□□ -0.32
CCDC87-201ENST00000333861 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
CCDC87-201ENST00000333861 GJB4Q9NTQ9 266 aa13.05□□□□□ -0.32
CCDC87-201ENST00000333861 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
CCDC87-201ENST00000333861 A0A0D9SFI3 127 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 GOLGA6L19H0YKK7 550 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
CCDC87-201ENST00000333861 CNTROBQ8N137 903 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 AOPEPQ8N6M6 819 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 FAM53CQ9NYF3 392 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 PI4KAP2A4QPH2 592 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 HDGFL1Q5TGJ6 251 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 ZNF589Q86UQ0 364 aaPredicted RBP13.04□□□□□ -0.32
CCDC87-201ENST00000333861 PI4KAP1Q8N8J0 262 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
CCDC87-201ENST00000333861 NCOA5Q9HCD5 579 aaKnown RBP13.04□□□□□ -0.32
CCDC87-201ENST00000333861 LOC102724159A0A0B4J2E5 919 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 BECN2A8MW95 431 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 PWP2Q15269 919 aaKnown RBP13.03□□□□□ -0.32
CCDC87-201ENST00000333861 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 AACSQ86V21 672 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 CCAR2Q8N163 923 aaKnown RBP13.03□□□□□ -0.32
CCDC87-201ENST00000333861 BRF1Q92994 677 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
CCDC87-201ENST00000333861 CPSF1Q10570 1443 aaKnown RBP13.03□□□□□ -0.32
CCDC87-201ENST00000333861 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
CCDC87-201ENST00000333861 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
CCDC87-201ENST00000333861 CHD2O14647 1828 aaKnown RBP13.02□□□□□ -0.32
CCDC87-201ENST00000333861 SMC2O95347 1197 aa13.02□□□□□ -0.32
CCDC87-201ENST00000333861 GNAI3P08754 354 aa13.02□□□□□ -0.32
CCDC87-201ENST00000333861 CCZ1BP86790 482 aa13.02□□□□□ -0.32
CCDC87-201ENST00000333861 CCZ1P86791 482 aaPredicted RBP13.02□□□□□ -0.32
CCDC87-201ENST00000333861 RGS22Q8NE09 1264 aa13.02□□□□□ -0.32
CCDC87-201ENST00000333861 TMEM94Q12767 1356 aa13.02□□□□□ -0.32
CCDC87-201ENST00000333861 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.33
CCDC87-201ENST00000333861 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
CCDC87-201ENST00000333861 SLC20A2Q08357 652 aa13.02□□□□□ -0.33
CCDC87-201ENST00000333861 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
CCDC87-201ENST00000333861 HOMER1Q86YM7 354 aa13.02□□□□□ -0.33
CCDC87-201ENST00000333861 EYA1Q99502 592 aa13.02□□□□□ -0.33
CCDC87-201ENST00000333861 EDC4Q6P2E9 1401 aaKnown RBP13.01□□□□□ -0.33
CCDC87-201ENST00000333861 H3BQV1 296 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 MYO1CO00159 1063 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 AMPHP49418 695 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 A0A1B0GVL5 298 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 SASH3O75995 380 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 ATF3P18847 181 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 PSME1Q06323 249 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 TDRD7Q8NHU6 1098 aaKnown RBP13.01□□□□□ -0.33
CCDC87-201ENST00000333861 RASSF4Q9H2L5 321 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
CCDC87-201ENST00000333861 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
CCDC87-201ENST00000333861 OAS2P29728 719 aaKnown RBP13□□□□□ -0.33
CCDC87-201ENST00000333861 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
CCDC87-201ENST00000333861 IL17REQ8NFR9 667 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms