RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
TUBB2A-201ENST00000333628 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
TUBB2A-201ENST00000333628 SBF1O95248 1867 aa16.83■□□□□ 0.29
TUBB2A-201ENST00000333628 CCDC88AQ3V6T2 1871 aa16.83■□□□□ 0.29
TUBB2A-201ENST00000333628 H7C1W4 665 aa16.83■□□□□ 0.28
TUBB2A-201ENST00000333628 ALDH1L1O75891 902 aa16.83■□□□□ 0.28
TUBB2A-201ENST00000333628 TRIM27P14373 513 aa16.83■□□□□ 0.28
TUBB2A-201ENST00000333628 C1QTNF8P60827 252 aa16.83■□□□□ 0.28
TUBB2A-201ENST00000333628 MASTLQ96GX5 879 aa16.83■□□□□ 0.28
TUBB2A-201ENST00000333628 TNNQ9UQP3 1299 aa16.83■□□□□ 0.28
TUBB2A-201ENST00000333628 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
TUBB2A-201ENST00000333628 IRS4O14654 1257 aaPredicted RBP16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 STYK1Q6J9G0 422 aa16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 C3orf67Q6ZVT6 689 aa16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 NLRP3Q96P20 1036 aa16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 CCT4P50991 539 aaKnown RBP16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 UBE3BQ7Z3V4 1068 aa16.81■□□□□ 0.28
TUBB2A-201ENST00000333628 RIC1Q4ADV7 1423 aa16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 TAF1P21675 1872 aa16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 C21orf2O43822 256 aa16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 NPR1P16066 1061 aa16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 INTS3Q68E01 1043 aaKnown RBP16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 PRPF40BQ6NWY9 871 aaKnown RBP16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
TUBB2A-201ENST00000333628 ABCC4O15439 1325 aa16.79■□□□□ 0.28
TUBB2A-201ENST00000333628 GRM8O00222 908 aa16.79■□□□□ 0.28
TUBB2A-201ENST00000333628 CASP7P55210 303 aa16.79■□□□□ 0.28
TUBB2A-201ENST00000333628 CRY2Q49AN0 593 aa16.79■□□□□ 0.28
TUBB2A-201ENST00000333628 C9orf78Q9NZ63 289 aaPredicted RBP16.79■□□□□ 0.28
TUBB2A-201ENST00000333628 CDHR2Q9BYE9 1310 aa16.79■□□□□ 0.28
TUBB2A-201ENST00000333628 PDE8AO60658 829 aa16.78■□□□□ 0.28
TUBB2A-201ENST00000333628 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
TUBB2A-201ENST00000333628 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
TUBB2A-201ENST00000333628 NBPF7P0C2Y1 421 aaPredicted RBP16.77■□□□□ 0.28
TUBB2A-201ENST00000333628 RASSF7Q02833 373 aa16.77■□□□□ 0.28
TUBB2A-201ENST00000333628 DZIP1LQ8IYY4 767 aaKnown RBP16.77■□□□□ 0.28
TUBB2A-201ENST00000333628 CEP350Q5VT06 3117 aa16.77■□□□□ 0.27
TUBB2A-201ENST00000333628 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.27
TUBB2A-201ENST00000333628 OLFM4Q6UX06 510 aa16.77■□□□□ 0.27
TUBB2A-201ENST00000333628 UTYO14607 1347 aa16.76■□□□□ 0.27
TUBB2A-201ENST00000333628 RLBP1P12271 317 aa16.76■□□□□ 0.27
TUBB2A-201ENST00000333628 HOXA10P31260 410 aaPredicted RBP16.76■□□□□ 0.27
TUBB2A-201ENST00000333628 PRELPP51888 382 aa16.76■□□□□ 0.27
TUBB2A-201ENST00000333628 FTSJ3Q8IY81 847 aaKnown RBP16.76■□□□□ 0.27
TUBB2A-201ENST00000333628 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
TUBB2A-201ENST00000333628 RPGRQ92834 1020 aaKnown RBP16.76■□□□□ 0.27
TUBB2A-201ENST00000333628 NFKBIEO00221 500 aa16.75■□□□□ 0.27
TUBB2A-201ENST00000333628 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
TUBB2A-201ENST00000333628 C7orf43Q8WVR3 580 aa16.75■□□□□ 0.27
TUBB2A-201ENST00000333628 RBM17Q96I25 401 aaKnown RBP16.75■□□□□ 0.27
TUBB2A-201ENST00000333628 ALDH1B1P30837 517 aa16.74■□□□□ 0.27
TUBB2A-201ENST00000333628 FOXO4P98177 505 aa16.74■□□□□ 0.27
TUBB2A-201ENST00000333628 C9orf131Q5VYM1 1079 aa16.74■□□□□ 0.27
TUBB2A-201ENST00000333628 SLC51AQ86UW1 340 aa16.74■□□□□ 0.27
TUBB2A-201ENST00000333628 TTLL11Q8NHH1 800 aa16.74■□□□□ 0.27
TUBB2A-201ENST00000333628 CRAMP1Q96RY5 1269 aa16.74■□□□□ 0.27
TUBB2A-201ENST00000333628 PLA2G12BQ9BX93 195 aa16.74■□□□□ 0.27
TUBB2A-201ENST00000333628 DICER1Q9UPY3 1922 aaKnown RBP16.73■□□□□ 0.27
TUBB2A-201ENST00000333628 CTSWP56202 376 aa16.73■□□□□ 0.27
TUBB2A-201ENST00000333628 CSF1RP07333 972 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 CCDC152Q4G0S7 254 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 DDX46Q7L014 1031 aaKnown RBP16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 CCDC85AQ96PX6 553 aaPredicted RBP16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 RNF181Q9P0P0 153 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 MYH3P11055 1940 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 COL4A1P02462 1669 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 MEIS3Q99687 375 aa16.72■□□□□ 0.27
TUBB2A-201ENST00000333628 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.27
TUBB2A-201ENST00000333628 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
TUBB2A-201ENST00000333628 C8orf34Q49A92 452 aa16.71■□□□□ 0.27
TUBB2A-201ENST00000333628 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
TUBB2A-201ENST00000333628 ZNF526Q8TF50 670 aaPredicted RBP16.71■□□□□ 0.27
TUBB2A-201ENST00000333628 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
TUBB2A-201ENST00000333628 CCDC93Q567U6 631 aa16.7■□□□□ 0.26
TUBB2A-201ENST00000333628 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
TUBB2A-201ENST00000333628 GREM2Q9H772 168 aa16.7■□□□□ 0.26
TUBB2A-201ENST00000333628 PPEF1O14829 653 aaPredicted RBP16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 BBOX1O75936 387 aa16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 GNAI3P08754 354 aa16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 LMNB1P20700 586 aa16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 SNED1Q8TER0 1413 aa16.69■□□□□ 0.26
TUBB2A-201ENST00000333628 GRAPQ13588 217 aa16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 GRAPLQ8TC17 118 aaPredicted RBP16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 CELF1Q92879 486 aaKnown RBP16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 BICC1Q9H694 974 aaKnown RBP16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 COG6Q9Y2V7 657 aa16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 RPS8P62241 208 aaKnown RBP16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 ANKRD44Q8N8A2 993 aa16.68■□□□□ 0.26
TUBB2A-201ENST00000333628 LTBP3Q9NS15 1303 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms