RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 PROSER3Q2NL68 480 aa12.1□□□□□ -0.47
PRAMEF1-201ENST00000332296 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
PRAMEF1-201ENST00000332296 RUFY3Q7L099 469 aa12.1□□□□□ -0.47
PRAMEF1-201ENST00000332296 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
PRAMEF1-201ENST00000332296 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
PRAMEF1-201ENST00000332296 UBE2Q2Q8WVN8 375 aa12.1□□□□□ -0.47
PRAMEF1-201ENST00000332296 WDR33Q9C0J8 1336 aaKnown RBP12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 OFD1O75665 1012 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 SLC52A2Q9HAB3 445 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 CABP4P57796 275 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
PRAMEF1-201ENST00000332296 PTH1RQ03431 593 aa12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 TSPY26PQ9H489 355 aa12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 ITGB4P16144 1822 aa12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 OS9Q13438 667 aaPredicted RBP12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 MAP3K2Q9Y2U5 619 aa12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.08□□□□□ -0.48
PRAMEF1-201ENST00000332296 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 TTC41PQ6P2S7 1318 aa12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 TPM2P07951 284 aa12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 CASTP20810 708 aaKnown RBP12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 MTX1Q13505 466 aa12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 ZKSCAN5Q9Y2L8 839 aa12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 MRC1P22897 1456 aa12.07□□□□□ -0.48
PRAMEF1-201ENST00000332296 ERVV-2B6SEH9 535 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 ZNF500O60304 480 aaPredicted RBP12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 GLRX3O76003 335 aaKnown RBP12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 ZSCAN22P10073 491 aaPredicted RBP12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 PDE4DQ08499 809 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 SLC39A6Q13433 755 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 TMEM87AQ8NBN3 555 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 SYT1P21579 422 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 COL9A3Q14050 684 aaPredicted RBP12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 SYAP1Q96A49 352 aaPredicted RBP12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 DIAPH3Q9NSV4 1193 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 DBF4Q9UBU7 674 aaPredicted RBP12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 LIMCH1Q9UPQ0 1083 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 C5P01031 1676 aa12.06□□□□□ -0.48
PRAMEF1-201ENST00000332296 TRIM66O15016 1216 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 STX6O43752 255 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 HSP90AA2PQ14568 343 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 SYTL4Q96C24 671 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 ABCB7O75027 752 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 F13A1P00488 732 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
PRAMEF1-201ENST00000332296 FIBPO43427 364 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 RRP9O43818 475 aaKnown RBP12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 ZNF790Q6PG37 636 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 ACSBG1Q96GR2 724 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 KAZALD1Q96I82 304 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 R3HCC1Q9Y3T6 440 aaKnown RBP12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
PRAMEF1-201ENST00000332296 KSR2Q6VAB6 950 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 AACSQ86V21 672 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 TLR7Q9NYK1 1049 aaKnown RBP12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 CAPN15O75808 1086 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 GJB2P29033 226 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 KRI1Q8N9T8 703 aaKnown RBP12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 PIGBQ92521 554 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 FAM227BQ96M60 508 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 RGS17Q9UGC6 210 aaPredicted RBP12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 CCDC171Q6TFL3 1326 aa12.03□□□□□ -0.48
PRAMEF1-201ENST00000332296 PHF14O94880 888 aa12.02□□□□□ -0.48
PRAMEF1-201ENST00000332296 SASH1O94885 1247 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms