RNA–Protein interactions for RNA: ENST00000330854.15

SUGP2-201, Transcript of SURP and G-patch domain containing 2, humanhuman

TSL 1 (best)

Gene SUGP2, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP2-201ENST00000330854 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
SUGP2-201ENST00000330854 CCDC57Q2TAC2 916 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 FOXD4L6Q3SYB3 417 aaPredicted RBP11.68□□□□□ -0.54
SUGP2-201ENST00000330854 FOXD4L3Q6VB84 417 aaPredicted RBP11.68□□□□□ -0.54
SUGP2-201ENST00000330854 RPAP2Q8IXW5 612 aaPredicted RBP11.68□□□□□ -0.54
SUGP2-201ENST00000330854 LRRCC1Q9C099 1032 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 CNNM1Q9NRU3 951 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 NIP7Q9Y221 180 aaKnown RBP eCLIP11.68□□□□□ -0.54
SUGP2-201ENST00000330854 DLEC1Q9Y238 1755 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 HCLS1P14317 486 aaPredicted RBP11.68□□□□□ -0.54
SUGP2-201ENST00000330854 SMC5Q8IY18 1101 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 USP44Q9H0E7 712 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
SUGP2-201ENST00000330854 OFD1O75665 1012 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 AACSQ86V21 672 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 LINS1Q8NG48 757 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 DNAJC2Q99543 621 aaKnown RBP11.68□□□□□ -0.54
SUGP2-201ENST00000330854 KIF20BQ96Q89 1820 aa11.68□□□□□ -0.54
SUGP2-201ENST00000330854 CCDC173Q0VFZ6 552 aa11.67□□□□□ -0.54
SUGP2-201ENST00000330854 PKP1Q13835 747 aa11.67□□□□□ -0.54
SUGP2-201ENST00000330854 CWC25Q9NXE8 425 aaPredicted RBP11.67□□□□□ -0.54
SUGP2-201ENST00000330854 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
SUGP2-201ENST00000330854 EP400Q96L91 3159 aa11.67□□□□□ -0.54
SUGP2-201ENST00000330854 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
SUGP2-201ENST00000330854 SYNE4Q8N205 404 aa11.67□□□□□ -0.54
SUGP2-201ENST00000330854 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
SUGP2-201ENST00000330854 RFC4P35249 363 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 INTS3Q68E01 1043 aaKnown RBP11.66□□□□□ -0.54
SUGP2-201ENST00000330854 GCC1Q96CN9 775 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
SUGP2-201ENST00000330854 TEX13AQ9BXU3 409 aaPredicted RBP11.66□□□□□ -0.54
SUGP2-201ENST00000330854 IGSF3O75054 1194 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 ITGB4P16144 1822 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 DNTTIP2Q5QJE6 756 aaKnown RBP11.66□□□□□ -0.54
SUGP2-201ENST00000330854 VIRMAQ69YN4 1812 aaKnown RBP11.66□□□□□ -0.54
SUGP2-201ENST00000330854 HELBQ8NG08 1087 aaPredicted RBP11.66□□□□□ -0.54
SUGP2-201ENST00000330854 TFCP2L1Q9NZI6 479 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 NUCB1Q02818 461 aa11.66□□□□□ -0.54
SUGP2-201ENST00000330854 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.66□□□□□ -0.54
SUGP2-201ENST00000330854 RAB3GAP1Q15042 981 aa11.65□□□□□ -0.54
SUGP2-201ENST00000330854 SUCLG2Q96I99 432 aa11.65□□□□□ -0.54
SUGP2-201ENST00000330854 RBSNQ9H1K0 784 aa11.65□□□□□ -0.54
SUGP2-201ENST00000330854 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
SUGP2-201ENST00000330854 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.54
SUGP2-201ENST00000330854 SKOR2Q2VWA4 1001 aaPredicted RBP11.65□□□□□ -0.54
SUGP2-201ENST00000330854 AK9Q5TCS8 1911 aa11.65□□□□□ -0.55
SUGP2-201ENST00000330854 NBPF26B4DH59 902 aa11.65□□□□□ -0.55
SUGP2-201ENST00000330854 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.55
SUGP2-201ENST00000330854 NBPF10Q6P3W6 841 aaKnown RBP11.65□□□□□ -0.55
SUGP2-201ENST00000330854 NBPF15Q8N660 670 aa11.65□□□□□ -0.55
SUGP2-201ENST00000330854 ANKRD44Q8N8A2 993 aa11.65□□□□□ -0.55
SUGP2-201ENST00000330854 MPHOSPH8Q99549 860 aa11.65□□□□□ -0.55
SUGP2-201ENST00000330854 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
SUGP2-201ENST00000330854 GPATCH3Q96I76 525 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 ANO2Q9NQ90 1003 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 C4AP0C0L4 1744 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 BEND3Q5T5X7 828 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
SUGP2-201ENST00000330854 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 RTCBQ9Y3I0 505 aaKnown RBP11.64□□□□□ -0.55
SUGP2-201ENST00000330854 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 ABCC4O15439 1325 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 PTMSP20962 102 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 FSTL1Q12841 308 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
SUGP2-201ENST00000330854 PRPF40AO75400 957 aaKnown RBP11.63□□□□□ -0.55
SUGP2-201ENST00000330854 HOXB7P09629 217 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 HLFQ16534 295 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
SUGP2-201ENST00000330854 IQSEC3Q9UPP2 1182 aaPredicted RBP11.63□□□□□ -0.55
SUGP2-201ENST00000330854 BAG4O95429 457 aaKnown RBP11.63□□□□□ -0.55
SUGP2-201ENST00000330854 RBM25P49756 843 aaKnown RBP11.63□□□□□ -0.55
SUGP2-201ENST00000330854 CBX1P83916 185 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 GCKRQ14397 625 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 MSL1Q68DK7 614 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 SIRT2Q8IXJ6 389 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
SUGP2-201ENST00000330854 NDUFB9Q9Y6M9 179 aa11.63□□□□□ -0.55
SUGP2-201ENST00000330854 NEURL1BA8MQ27 555 aa11.62□□□□□ -0.55
SUGP2-201ENST00000330854 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
SUGP2-201ENST00000330854 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
SUGP2-201ENST00000330854 SNX21Q969T3 373 aa11.62□□□□□ -0.55
SUGP2-201ENST00000330854 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 SRP68Q9UHB9 627 aaKnown RBP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 HEG1Q9ULI3 1381 aa11.62□□□□□ -0.55
SUGP2-201ENST00000330854 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 BMP2KLQ5H9B9 411 aa11.62□□□□□ -0.55
SUGP2-201ENST00000330854 LDHAL6AQ6ZMR3 332 aa11.62□□□□□ -0.55
SUGP2-201ENST00000330854 NBPF5PQ86XG9 351 aaPredicted RBP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 ISY1Q9ULR0 285 aaKnown RBP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 PTMAP06454 111 aaKnown RBP11.62□□□□□ -0.55
SUGP2-201ENST00000330854 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms