RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 LMNB1P20700 586 aa23.97■■□□□ 1.43
MRPL54-201ENST00000330133 CASP7P55210 303 aa23.97■■□□□ 1.43
MRPL54-201ENST00000330133 CTSWP56202 376 aa23.97■■□□□ 1.43
MRPL54-201ENST00000330133 GOLGB1Q14789 3259 aaKnown RBP23.97■■□□□ 1.43
MRPL54-201ENST00000330133 OLFM4Q6UX06 510 aa23.97■■□□□ 1.43
MRPL54-201ENST00000330133 ATP6V0A2Q9Y487 856 aa23.97■■□□□ 1.43
MRPL54-201ENST00000330133 GRM8O00222 908 aa23.96■■□□□ 1.43
MRPL54-201ENST00000330133 IPO8O15397 1037 aaKnown RBP23.96■■□□□ 1.43
MRPL54-201ENST00000330133 TMC4Q7Z404 712 aa23.96■■□□□ 1.43
MRPL54-201ENST00000330133 PLA2G12BQ9BX93 195 aa23.96■■□□□ 1.43
MRPL54-201ENST00000330133 CHD4Q14839 1912 aa23.96■■□□□ 1.43
MRPL54-201ENST00000330133 LTBP3Q9NS15 1303 aa23.95■■□□□ 1.42
MRPL54-201ENST00000330133 BCAR3O75815 825 aa23.95■■□□□ 1.42
MRPL54-201ENST00000330133 FKBP4Q02790 459 aaKnown RBP eCLIP23.95■■□□□ 1.42
MRPL54-201ENST00000330133 SP8Q8IXZ3 490 aa23.95■■□□□ 1.42
MRPL54-201ENST00000330133 ARHGAP45Q92619 1136 aa23.95■■□□□ 1.42
MRPL54-201ENST00000330133 CCDC85AQ96PX6 553 aaPredicted RBP23.95■■□□□ 1.42
MRPL54-201ENST00000330133 DDX60Q8IY21 1712 aaKnown RBP23.94■■□□□ 1.42
MRPL54-201ENST00000330133 RPS8P62241 208 aaKnown RBP23.94■■□□□ 1.42
MRPL54-201ENST00000330133 TTLL11Q8NHH1 800 aa23.94■■□□□ 1.42
MRPL54-201ENST00000330133 CELF1Q92879 486 aaKnown RBP23.94■■□□□ 1.42
MRPL54-201ENST00000330133 SEC31BQ9NQW1 1179 aa23.93■■□□□ 1.42
MRPL54-201ENST00000330133 CCT4P50991 539 aaKnown RBP23.92■■□□□ 1.42
MRPL54-201ENST00000330133 FRAT1Q92837 279 aaPredicted RBP23.92■■□□□ 1.42
MRPL54-201ENST00000330133 LAMB2P55268 1798 aa23.91■■□□□ 1.42
MRPL54-201ENST00000330133 PRELPP51888 382 aa23.91■■□□□ 1.42
MRPL54-201ENST00000330133 CDC5LQ99459 802 aaKnown RBP23.91■■□□□ 1.42
MRPL54-201ENST00000330133 PSMD1Q99460 953 aa23.91■■□□□ 1.42
MRPL54-201ENST00000330133 CACNA1SQ13698 1873 aa23.9■■□□□ 1.42
MRPL54-201ENST00000330133 ANKRD18AQ8IVF6 992 aa23.9■■□□□ 1.42
MRPL54-201ENST00000330133 ZNF784Q8NCA9 323 aaPredicted RBP23.9■■□□□ 1.42
MRPL54-201ENST00000330133 GREM2Q9H772 168 aa23.9■■□□□ 1.42
MRPL54-201ENST00000330133 UTRNP46939 3433 aa23.9■■□□□ 1.42
MRPL54-201ENST00000330133 CSF1RP07333 972 aa23.89■■□□□ 1.41
MRPL54-201ENST00000330133 MPNDQ8N594 471 aa23.89■■□□□ 1.41
MRPL54-201ENST00000330133 ZNF277Q9NRM2 450 aaPredicted RBP23.89■■□□□ 1.41
MRPL54-201ENST00000330133 UTYO14607 1347 aa23.88■■□□□ 1.41
MRPL54-201ENST00000330133 FOXO4P98177 505 aa23.88■■□□□ 1.41
MRPL54-201ENST00000330133 DPP8Q6V1X1 898 aaPredicted RBP23.88■■□□□ 1.41
MRPL54-201ENST00000330133 ATF7IPQ6VMQ6 1270 aa23.88■■□□□ 1.41
MRPL54-201ENST00000330133 SLC51AQ86UW1 340 aa23.88■■□□□ 1.41
MRPL54-201ENST00000330133 SUPT20HQ8NEM7 779 aa23.88■■□□□ 1.41
MRPL54-201ENST00000330133 RTL9Q8NET4 1388 aa23.88■■□□□ 1.41
MRPL54-201ENST00000330133 NBPF7P0C2Y1 421 aaPredicted RBP23.87■■□□□ 1.41
MRPL54-201ENST00000330133 ZKSCAN2Q63HK3 967 aa23.87■■□□□ 1.41
MRPL54-201ENST00000330133 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
MRPL54-201ENST00000330133 CHMP3Q9Y3E7 222 aa23.87■■□□□ 1.41
MRPL54-201ENST00000330133 ZC3H4Q9UPT8 1303 aaKnown RBP23.86■■□□□ 1.41
MRPL54-201ENST00000330133 ITGA6P23229 1130 aa23.86■■□□□ 1.41
MRPL54-201ENST00000330133 IARSP41252 1262 aaKnown RBP23.86■■□□□ 1.41
MRPL54-201ENST00000330133 LMBR1LQ6UX01 489 aa23.86■■□□□ 1.41
MRPL54-201ENST00000330133 SUCLG2Q96I99 432 aa23.86■■□□□ 1.41
MRPL54-201ENST00000330133 USP44Q9H0E7 712 aa23.86■■□□□ 1.41
MRPL54-201ENST00000330133 ANKRD18BA2A2Z9 1011 aa23.85■■□□□ 1.41
MRPL54-201ENST00000330133 TRIM27P14373 513 aa23.85■■□□□ 1.41
MRPL54-201ENST00000330133 IGHMBP2P38935 993 aaKnown RBP23.85■■□□□ 1.41
MRPL54-201ENST00000330133 FAM161AQ3B820 660 aa23.85■■□□□ 1.41
MRPL54-201ENST00000330133 ZNF526Q8TF50 670 aaPredicted RBP23.85■■□□□ 1.41
MRPL54-201ENST00000330133 FER1L6Q2WGJ9 1857 aa23.85■■□□□ 1.41
MRPL54-201ENST00000330133 SNED1Q8TER0 1413 aa23.84■■□□□ 1.41
MRPL54-201ENST00000330133 IFIT5Q13325 482 aaKnown RBP23.84■■□□□ 1.41
MRPL54-201ENST00000330133 EPHA10Q5JZY3 1008 aa23.84■■□□□ 1.41
MRPL54-201ENST00000330133 INTS3Q68E01 1043 aaKnown RBP23.84■■□□□ 1.41
MRPL54-201ENST00000330133 RTFDC1Q9BY42 306 aaPredicted RBP23.84■■□□□ 1.41
MRPL54-201ENST00000330133 NSFL1CQ9UNZ2 370 aaKnown RBP23.84■■□□□ 1.41
MRPL54-201ENST00000330133 VPS33BQ9H267 617 aa23.83■■□□□ 1.41
MRPL54-201ENST00000330133 GPBP1L1Q9HC44 474 aaPredicted RBP23.83■■□□□ 1.41
MRPL54-201ENST00000330133 BSDC1Q9NW68 430 aaPredicted RBP23.83■■□□□ 1.41
MRPL54-201ENST00000330133 GPSM2P81274 684 aa23.82■■□□□ 1.4
MRPL54-201ENST00000330133 CCDC57Q2TAC2 916 aa23.82■■□□□ 1.4
MRPL54-201ENST00000330133 JDP2Q8WYK2 163 aa23.82■■□□□ 1.4
MRPL54-201ENST00000330133 CLUAP1Q96AJ1 413 aa23.82■■□□□ 1.4
MRPL54-201ENST00000330133 MPHOSPH8Q99549 860 aa23.82■■□□□ 1.4
MRPL54-201ENST00000330133 HDAC5Q9UQL6 1122 aa23.82■■□□□ 1.4
MRPL54-201ENST00000330133 UBTFL1P0CB47 393 aaPredicted RBP23.81■■□□□ 1.4
MRPL54-201ENST00000330133 DPY19L2Q6NUT2 758 aa23.81■■□□□ 1.4
MRPL54-201ENST00000330133 LARGE2Q8N3Y3 721 aa23.81■■□□□ 1.4
MRPL54-201ENST00000330133 KAZALD1Q96I82 304 aa23.81■■□□□ 1.4
MRPL54-201ENST00000330133 ANKIB1Q9P2G1 1089 aa23.81■■□□□ 1.4
MRPL54-201ENST00000330133 RCAN3Q9UKA8 241 aa23.81■■□□□ 1.4
MRPL54-201ENST00000330133 TNNQ9UQP3 1299 aa23.81■■□□□ 1.4
MRPL54-201ENST00000330133 C6orf229H3BNL8 230 aa23.8■■□□□ 1.4
MRPL54-201ENST00000330133 PPIP5K2O43314 1243 aa23.8■■□□□ 1.4
MRPL54-201ENST00000330133 SBF1O95248 1867 aa23.8■■□□□ 1.4
MRPL54-201ENST00000330133 TAF7LQ5H9L4 462 aa23.8■■□□□ 1.4
MRPL54-201ENST00000330133 BICC1Q9H694 974 aaKnown RBP23.8■■□□□ 1.4
MRPL54-201ENST00000330133 KDM2BQ8NHM5 1336 aa23.8■■□□□ 1.4
MRPL54-201ENST00000330133 TAF1P21675 1872 aa23.79■■□□□ 1.4
MRPL54-201ENST00000330133 FTSJ3Q8IY81 847 aaKnown RBP23.79■■□□□ 1.4
MRPL54-201ENST00000330133 PODXL2Q9NZ53 605 aa23.79■■□□□ 1.4
MRPL54-201ENST00000330133 GLTPD2A6NH11 291 aa23.78■■□□□ 1.4
MRPL54-201ENST00000330133 AOC3Q16853 763 aa23.78■■□□□ 1.4
MRPL54-201ENST00000330133 EYA3Q99504 573 aa23.78■■□□□ 1.4
MRPL54-201ENST00000330133 GGA1Q9UJY5 639 aa23.78■■□□□ 1.4
MRPL54-201ENST00000330133 MINPP1Q9UNW1 487 aa23.78■■□□□ 1.4
MRPL54-201ENST00000330133 COL4A1P02462 1669 aa23.78■■□□□ 1.4
MRPL54-201ENST00000330133 GNAI3P08754 354 aa23.77■■□□□ 1.4
MRPL54-201ENST00000330133 RABL6Q3YEC7 729 aaPredicted RBP23.77■■□□□ 1.4
MRPL54-201ENST00000330133 NIM1KQ8IY84 436 aa23.77■■□□□ 1.4
MRPL54-201ENST00000330133 DZIP1LQ8IYY4 767 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms