RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PDCL3Q9H2J4 239 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 UQCRHLA0A096LP55 91 aa18.29■□□□□ 0.52
BRCC3-201ENST00000330045 KDM4AO75164 1064 aa18.29■□□□□ 0.52
BRCC3-201ENST00000330045 UQCRHP07919 91 aa18.29■□□□□ 0.52
BRCC3-201ENST00000330045 GCKRQ14397 625 aa18.29■□□□□ 0.52
BRCC3-201ENST00000330045 COL9A3Q14050 684 aaPredicted RBP18.29■□□□□ 0.52
BRCC3-201ENST00000330045 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
BRCC3-201ENST00000330045 PDCP20941 246 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 SLC52A2Q9HAB3 445 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 RPS6KB1P23443 525 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 KRT85P78386 507 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 COPS6Q7L5N1 327 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 MPNDQ8N594 471 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 MYD88Q99836 296 aa18.28■□□□□ 0.52
BRCC3-201ENST00000330045 ALDH8A1Q9H2A2 487 aaPredicted RBP18.28■□□□□ 0.52
BRCC3-201ENST00000330045 EPHA10Q5JZY3 1008 aa18.27■□□□□ 0.52
BRCC3-201ENST00000330045 SASS6Q6UVJ0 657 aa18.27■□□□□ 0.52
BRCC3-201ENST00000330045 TCEANC2Q96MN5 208 aa18.27■□□□□ 0.52
BRCC3-201ENST00000330045 METTL22Q9BUU2 404 aaPredicted RBP18.27■□□□□ 0.52
BRCC3-201ENST00000330045 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.52
BRCC3-201ENST00000330045 LTBP4Q8N2S1 1624 aa18.27■□□□□ 0.52
BRCC3-201ENST00000330045 CDC37L1Q7L3B6 337 aa18.27■□□□□ 0.51
BRCC3-201ENST00000330045 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.51
BRCC3-201ENST00000330045 ZNF830Q96NB3 372 aaPredicted RBP18.27■□□□□ 0.51
BRCC3-201ENST00000330045 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
BRCC3-201ENST00000330045 IFNL2Q8IZJ0 200 aa18.26■□□□□ 0.51
BRCC3-201ENST00000330045 TAF6LQ9Y6J9 622 aa18.26■□□□□ 0.51
BRCC3-201ENST00000330045 JCADQ9P266 1359 aa18.26■□□□□ 0.51
BRCC3-201ENST00000330045 RBM10P98175 930 aaKnown RBP18.26■□□□□ 0.51
BRCC3-201ENST00000330045 TOB2Q14106 344 aaPredicted RBP18.26■□□□□ 0.51
BRCC3-201ENST00000330045 TTC6Q86TZ1 520 aa18.26■□□□□ 0.51
BRCC3-201ENST00000330045 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
BRCC3-201ENST00000330045 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
BRCC3-201ENST00000330045 ELP1O95163 1332 aa18.25■□□□□ 0.51
BRCC3-201ENST00000330045 TAF5LO75529 589 aa18.25■□□□□ 0.51
BRCC3-201ENST00000330045 CCDC192P0DO97 292 aa18.25■□□□□ 0.51
BRCC3-201ENST00000330045 PLCB2Q00722 1185 aa18.25■□□□□ 0.51
BRCC3-201ENST00000330045 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
BRCC3-201ENST00000330045 EDC3Q96F86 508 aaKnown RBP18.25■□□□□ 0.51
BRCC3-201ENST00000330045 COPRSQ9NQ92 184 aa18.25■□□□□ 0.51
BRCC3-201ENST00000330045 ABCC6O95255 1503 aa18.24■□□□□ 0.51
BRCC3-201ENST00000330045 TTC12Q9H892 705 aaPredicted RBP18.24■□□□□ 0.51
BRCC3-201ENST00000330045 BTG4Q9NY30 223 aa18.24■□□□□ 0.51
BRCC3-201ENST00000330045 ATP5JP18859 108 aa18.24■□□□□ 0.51
BRCC3-201ENST00000330045 EVA1CP58658 441 aa18.24■□□□□ 0.51
BRCC3-201ENST00000330045 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
BRCC3-201ENST00000330045 DYNC1I1O14576 645 aa18.23■□□□□ 0.51
BRCC3-201ENST00000330045 PIP4K2AP48426 406 aaPredicted RBP18.23■□□□□ 0.51
BRCC3-201ENST00000330045 DNTTIP2Q5QJE6 756 aaKnown RBP18.23■□□□□ 0.51
BRCC3-201ENST00000330045 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
BRCC3-201ENST00000330045 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
BRCC3-201ENST00000330045 FAM13BQ9NYF5 915 aa18.23■□□□□ 0.51
BRCC3-201ENST00000330045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.23■□□□□ 0.51
BRCC3-201ENST00000330045 DBNLQ9UJU6 430 aaKnown RBP18.23■□□□□ 0.51
BRCC3-201ENST00000330045 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
BRCC3-201ENST00000330045 KRT32Q14532 448 aa18.23■□□□□ 0.51
BRCC3-201ENST00000330045 NOLC1Q14978 699 aaKnown RBP eCLIP18.23■□□□□ 0.51
BRCC3-201ENST00000330045 TNNI3KQ59H18 835 aa18.23■□□□□ 0.51
BRCC3-201ENST00000330045 LRP10Q7Z4F1 713 aa18.23■□□□□ 0.51
BRCC3-201ENST00000330045 FPGT-TNNI3KV9GXZ4 949 aa18.23■□□□□ 0.51
BRCC3-201ENST00000330045 RFX5P48382 616 aaPredicted RBP18.22■□□□□ 0.51
BRCC3-201ENST00000330045 STK3Q13188 491 aa18.22■□□□□ 0.51
BRCC3-201ENST00000330045 JARID2Q92833 1246 aaPredicted RBP18.22■□□□□ 0.51
BRCC3-201ENST00000330045 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
BRCC3-201ENST00000330045 TFCP2Q12800 502 aa18.22■□□□□ 0.51
BRCC3-201ENST00000330045 PKD1L3Q7Z443 1732 aa18.22■□□□□ 0.51
BRCC3-201ENST00000330045 SCAND2PQ9GZW5 306 aaPredicted RBP18.22■□□□□ 0.51
BRCC3-201ENST00000330045 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
BRCC3-201ENST00000330045 USP16Q9Y5T5 823 aa18.22■□□□□ 0.51
BRCC3-201ENST00000330045 AP5Z1O43299 807 aa18.21■□□□□ 0.51
BRCC3-201ENST00000330045 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
BRCC3-201ENST00000330045 LIG1P18858 919 aa18.21■□□□□ 0.51
BRCC3-201ENST00000330045 MAP3K11Q16584 847 aa18.21■□□□□ 0.51
BRCC3-201ENST00000330045 NUP62CLQ9H1M0 184 aa18.21■□□□□ 0.51
BRCC3-201ENST00000330045 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.5
BRCC3-201ENST00000330045 DCAF5Q96JK2 942 aa18.21■□□□□ 0.5
BRCC3-201ENST00000330045 COL15A1P39059 1388 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 TTC5Q8N0Z6 440 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 SPATA32Q96LK8 384 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 NEK1Q96PY6 1258 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 GOLGA6L4A6NEF3 574 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 RABL6Q3YEC7 729 aaPredicted RBP18.2■□□□□ 0.5
BRCC3-201ENST00000330045 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
BRCC3-201ENST00000330045 TFIP11Q9UBB9 837 aaKnown RBP18.2■□□□□ 0.5
BRCC3-201ENST00000330045 IL2RBP14784 551 aa18.19■□□□□ 0.5
BRCC3-201ENST00000330045 CAMK4Q16566 473 aa18.19■□□□□ 0.5
BRCC3-201ENST00000330045 NDUFB9Q9Y6M9 179 aa18.19■□□□□ 0.5
BRCC3-201ENST00000330045 AFDNP55196 1824 aaKnown RBP18.19■□□□□ 0.5
BRCC3-201ENST00000330045 RFX7Q2KHR2 1363 aa18.19■□□□□ 0.5
BRCC3-201ENST00000330045 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
BRCC3-201ENST00000330045 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
BRCC3-201ENST00000330045 DNAJC2Q99543 621 aaKnown RBP18.18■□□□□ 0.5
BRCC3-201ENST00000330045 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
BRCC3-201ENST00000330045 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
BRCC3-201ENST00000330045 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms