RNA–Protein interactions for RNA: ENST00000325558.10

PGA3-201, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGA3, Length 1,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-201ENST00000325558 SSFA2P28290 1259 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 NUCB2P80303 420 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 TSGA10IPQ3SY00 556 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.67□□□□□ -0.22
PGA3-201ENST00000325558 PUS3Q9BZE2 481 aaKnown RBP13.67□□□□□ -0.22
PGA3-201ENST00000325558 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 SPEF2Q9C093 1822 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
PGA3-201ENST00000325558 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 KIAA1211Q6ZU35 1233 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 FAM89AQ96GI7 184 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 ZNF594Q96JF6 807 aaPredicted RBP13.67□□□□□ -0.22
PGA3-201ENST00000325558 ZSWIM6Q9HCJ5 1215 aa13.67□□□□□ -0.22
PGA3-201ENST00000325558 DDX11L8A8MPP1 907 aa13.66□□□□□ -0.22
PGA3-201ENST00000325558 HSP90AA1P07900 732 aaKnown RBP13.66□□□□□ -0.22
PGA3-201ENST00000325558 FNBP4Q8N3X1 1017 aaPredicted RBP13.66□□□□□ -0.22
PGA3-201ENST00000325558 TTLL11Q8NHH1 800 aa13.66□□□□□ -0.22
PGA3-201ENST00000325558 EDC3Q96F86 508 aaKnown RBP13.66□□□□□ -0.22
PGA3-201ENST00000325558 UPF3BQ9BZI7 483 aaKnown RBP13.66□□□□□ -0.22
PGA3-201ENST00000325558 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
PGA3-201ENST00000325558 PALLDQ8WX93 1383 aa13.65□□□□□ -0.22
PGA3-201ENST00000325558 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
PGA3-201ENST00000325558 TAF5LO75529 589 aa13.65□□□□□ -0.22
PGA3-201ENST00000325558 TIMM10P62072 90 aa13.65□□□□□ -0.22
PGA3-201ENST00000325558 ITPK1Q13572 414 aa13.65□□□□□ -0.22
PGA3-201ENST00000325558 VPS72Q15906 364 aa13.65□□□□□ -0.22
PGA3-201ENST00000325558 SYNE4Q8N205 404 aa13.65□□□□□ -0.22
PGA3-201ENST00000325558 TRAK2O60296 914 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 PKP1Q13835 747 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 KBTBD3Q8NAB2 608 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 GBP4Q96PP9 640 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 ALDH8A1Q9H2A2 487 aaPredicted RBP13.64□□□□□ -0.23
PGA3-201ENST00000325558 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
PGA3-201ENST00000325558 SIK1P57059 783 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 ADCK5Q3MIX3 580 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
PGA3-201ENST00000325558 AK7Q96M32 723 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 FSD1Q9BTV5 496 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 CCDC87Q9NVE4 849 aa13.64□□□□□ -0.23
PGA3-201ENST00000325558 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
PGA3-201ENST00000325558 LRP5O75197 1615 aa13.63□□□□□ -0.23
PGA3-201ENST00000325558 RIC1Q4ADV7 1423 aa13.63□□□□□ -0.23
PGA3-201ENST00000325558 A0A1B0GUL7 405 aa13.63□□□□□ -0.23
PGA3-201ENST00000325558 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
PGA3-201ENST00000325558 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
PGA3-201ENST00000325558 VPS53Q5VIR6 699 aa13.63□□□□□ -0.23
PGA3-201ENST00000325558 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
PGA3-201ENST00000325558 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
PGA3-201ENST00000325558 SYTL4Q96C24 671 aaPredicted RBP13.63□□□□□ -0.23
PGA3-201ENST00000325558 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
PGA3-201ENST00000325558 AKAP11Q9UKA4 1901 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 SLC27A2O14975 620 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 BRD1O95696 1058 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 AK2P54819 239 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
PGA3-201ENST00000325558 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 CEP126Q9P2H0 1117 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 TBC1D2BQ9UPU7 963 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
PGA3-201ENST00000325558 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 PDE8AO60658 829 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 CTSWP56202 376 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 SMARCC1Q92922 1105 aaPredicted RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 NDUFB9Q9Y6M9 179 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 THSD7AQ9UPZ6 1657 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 DDX60Q8IY21 1712 aaKnown RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 BCORQ6W2J9 1755 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 CHGBP05060 677 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 PTMSP20962 102 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 GPTP24298 496 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 COL9A3Q14050 684 aaPredicted RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 ACSBG1Q96GR2 724 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 ZNF512BQ96KM6 892 aaPredicted RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 GREM2Q9H772 168 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 LIMCH1Q9UPQ0 1083 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
PGA3-201ENST00000325558 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
PGA3-201ENST00000325558 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
PGA3-201ENST00000325558 RGL2O15211 777 aa13.6□□□□□ -0.23
PGA3-201ENST00000325558 KCNQ2O43526 872 aa13.6□□□□□ -0.23
PGA3-201ENST00000325558 HELLSQ9NRZ9 838 aa13.6□□□□□ -0.23
PGA3-201ENST00000325558 HMG20BQ9P0W2 317 aa13.6□□□□□ -0.23
PGA3-201ENST00000325558 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
PGA3-201ENST00000325558 LAMB2P55268 1798 aa13.6□□□□□ -0.23
PGA3-201ENST00000325558 ITGA6P23229 1130 aa13.59□□□□□ -0.23
PGA3-201ENST00000325558 SKOR2Q2VWA4 1001 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms