RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 FAM227BQ96M60 508 aa23.68■■□□□ 1.38
SOX2-201ENST00000325404 NEURL1BA8MQ27 555 aa23.68■■□□□ 1.38
SOX2-201ENST00000325404 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
SOX2-201ENST00000325404 TPCN1Q9ULQ1 816 aa23.68■■□□□ 1.38
SOX2-201ENST00000325404 DNM1Q05193 864 aaKnown RBP23.67■■□□□ 1.38
SOX2-201ENST00000325404 COPRSQ9NQ92 184 aa23.67■■□□□ 1.38
SOX2-201ENST00000325404 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.67■■□□□ 1.38
SOX2-201ENST00000325404 GCKRQ14397 625 aa23.67■■□□□ 1.38
SOX2-201ENST00000325404 METTL22Q9BUU2 404 aaPredicted RBP23.67■■□□□ 1.38
SOX2-201ENST00000325404 BLOC1S2Q6QNY1 142 aa23.66■■□□□ 1.38
SOX2-201ENST00000325404 CCDC8Q9H0W5 538 aaPredicted RBP23.66■■□□□ 1.38
SOX2-201ENST00000325404 KDM4AO75164 1064 aa23.66■■□□□ 1.38
SOX2-201ENST00000325404 RPS6KB1P23443 525 aa23.66■■□□□ 1.38
SOX2-201ENST00000325404 CABP4P57796 275 aa23.66■■□□□ 1.38
SOX2-201ENST00000325404 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
SOX2-201ENST00000325404 TTC5Q8N0Z6 440 aa23.66■■□□□ 1.38
SOX2-201ENST00000325404 FSD1Q9BTV5 496 aa23.66■■□□□ 1.38
SOX2-201ENST00000325404 SASS6Q6UVJ0 657 aa23.65■■□□□ 1.38
SOX2-201ENST00000325404 KRT85P78386 507 aa23.65■■□□□ 1.38
SOX2-201ENST00000325404 KRT32Q14532 448 aa23.65■■□□□ 1.38
SOX2-201ENST00000325404 LARP1BQ659C4 914 aaKnown RBP23.65■■□□□ 1.38
SOX2-201ENST00000325404 MAP7D2Q96T17 732 aa23.65■■□□□ 1.38
SOX2-201ENST00000325404 A0A0D9SFI3 127 aa23.64■■□□□ 1.38
SOX2-201ENST00000325404 ATP5JP18859 108 aa23.64■■□□□ 1.38
SOX2-201ENST00000325404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.64■■□□□ 1.38
SOX2-201ENST00000325404 ADCY5O95622 1261 aa23.64■■□□□ 1.37
SOX2-201ENST00000325404 HCLS1P14317 486 aaPredicted RBP23.64■■□□□ 1.37
SOX2-201ENST00000325404 AIMP1Q12904 312 aaKnown RBP23.63■■□□□ 1.37
SOX2-201ENST00000325404 TICAM2Q86XR7 235 aa23.63■■□□□ 1.37
SOX2-201ENST00000325404 BTG4Q9NY30 223 aa23.63■■□□□ 1.37
SOX2-201ENST00000325404 USP25Q9UHP3 1055 aa23.63■■□□□ 1.37
SOX2-201ENST00000325404 PIBF1Q8WXW3 757 aa23.63■■□□□ 1.37
SOX2-201ENST00000325404 ZNF496Q96IT1 587 aaPredicted RBP23.63■■□□□ 1.37
SOX2-201ENST00000325404 BOLA2Q9H3K6 86 aa23.63■■□□□ 1.37
SOX2-201ENST00000325404 TLR7Q9NYK1 1049 aaKnown RBP23.63■■□□□ 1.37
SOX2-201ENST00000325404 VPS37CA5D8V6 355 aaPredicted RBP23.62■■□□□ 1.37
SOX2-201ENST00000325404 DYNC1I1O14576 645 aa23.62■■□□□ 1.37
SOX2-201ENST00000325404 C5P01031 1676 aa23.62■■□□□ 1.37
SOX2-201ENST00000325404 TPM3P06753 285 aa23.62■■□□□ 1.37
SOX2-201ENST00000325404 TAF5LO75529 589 aa23.61■■□□□ 1.37
SOX2-201ENST00000325404 RABL6Q3YEC7 729 aaPredicted RBP23.61■■□□□ 1.37
SOX2-201ENST00000325404 NECAB1Q8N987 351 aa23.61■■□□□ 1.37
SOX2-201ENST00000325404 XAGE3Q8WTP9 111 aa23.61■■□□□ 1.37
SOX2-201ENST00000325404 FMNL2Q96PY5 1086 aa23.61■■□□□ 1.37
SOX2-201ENST00000325404 SCAND2PQ9GZW5 306 aaPredicted RBP23.61■■□□□ 1.37
SOX2-201ENST00000325404 CCDC192P0DO97 292 aa23.6■■□□□ 1.37
SOX2-201ENST00000325404 RFX5P48382 616 aaPredicted RBP23.6■■□□□ 1.37
SOX2-201ENST00000325404 LRP10Q7Z4F1 713 aa23.6■■□□□ 1.37
SOX2-201ENST00000325404 COL22A1Q8NFW1 1626 aaPredicted RBP23.6■■□□□ 1.37
SOX2-201ENST00000325404 SNRPA1P09661 255 aaKnown RBP23.6■■□□□ 1.37
SOX2-201ENST00000325404 TOB2Q14106 344 aaPredicted RBP23.6■■□□□ 1.37
SOX2-201ENST00000325404 NKX1-1Q15270 411 aaPredicted RBP23.6■■□□□ 1.37
SOX2-201ENST00000325404 ERVV-2B6SEH9 535 aa23.59■■□□□ 1.37
SOX2-201ENST00000325404 GIMAP6Q6P9H5 292 aa23.59■■□□□ 1.37
SOX2-201ENST00000325404 ANKRD13DQ6ZTN6 518 aa23.59■■□□□ 1.37
SOX2-201ENST00000325404 COPS6Q7L5N1 327 aa23.59■■□□□ 1.37
SOX2-201ENST00000325404 COL14A1Q05707 1796 aaKnown RBP23.59■■□□□ 1.37
SOX2-201ENST00000325404 UQCRHLA0A096LP55 91 aa23.59■■□□□ 1.37
SOX2-201ENST00000325404 UQCRHP07919 91 aa23.59■■□□□ 1.37
SOX2-201ENST00000325404 DDX54Q8TDD1 881 aaKnown RBP23.59■■□□□ 1.37
SOX2-201ENST00000325404 MTERF4Q7Z6M4 381 aaKnown RBP23.58■■□□□ 1.37
SOX2-201ENST00000325404 TTC6Q86TZ1 520 aa23.58■■□□□ 1.37
SOX2-201ENST00000325404 MYD88Q99836 296 aa23.58■■□□□ 1.37
SOX2-201ENST00000325404 SIL1Q9H173 461 aa23.58■■□□□ 1.37
SOX2-201ENST00000325404 EPHA10Q5JZY3 1008 aa23.58■■□□□ 1.36
SOX2-201ENST00000325404 TNNI3KQ59H18 835 aa23.57■■□□□ 1.36
SOX2-201ENST00000325404 SPTLC3Q9NUV7 552 aa23.57■■□□□ 1.36
SOX2-201ENST00000325404 FPGT-TNNI3KV9GXZ4 949 aa23.57■■□□□ 1.36
SOX2-201ENST00000325404 PTPN12Q05209 780 aaKnown RBP23.57■■□□□ 1.36
SOX2-201ENST00000325404 CDC37L1Q7L3B6 337 aa23.57■■□□□ 1.36
SOX2-201ENST00000325404 U3KPZ7 1027 aaPredicted RBP23.57■■□□□ 1.36
SOX2-201ENST00000325404 ZNF589Q86UQ0 364 aaPredicted RBP23.56■■□□□ 1.36
SOX2-201ENST00000325404 PRIMPOLQ96LW4 560 aa23.56■■□□□ 1.36
SOX2-201ENST00000325404 DBNLQ9UJU6 430 aaKnown RBP23.56■■□□□ 1.36
SOX2-201ENST00000325404 NOLC1Q14978 699 aaKnown RBP eCLIP23.55■■□□□ 1.36
SOX2-201ENST00000325404 MAP3K11Q16584 847 aa23.55■■□□□ 1.36
SOX2-201ENST00000325404 MYL6BP14649 208 aa23.55■■□□□ 1.36
SOX2-201ENST00000325404 NUP62CLQ9H1M0 184 aa23.55■■□□□ 1.36
SOX2-201ENST00000325404 RBM43Q6ZSC3 357 aaKnown RBP23.54■■□□□ 1.36
SOX2-201ENST00000325404 FAM200AQ8TCP9 573 aa23.54■■□□□ 1.36
SOX2-201ENST00000325404 HAUS7Q99871 368 aa23.54■■□□□ 1.36
SOX2-201ENST00000325404 DDX19AQ9NUU7 478 aaKnown RBP23.54■■□□□ 1.36
SOX2-201ENST00000325404 KLHDC4Q8TBB5 520 aa23.54■■□□□ 1.36
SOX2-201ENST00000325404 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
SOX2-201ENST00000325404 SHANK3Q9BYB0 1731 aa23.54■■□□□ 1.36
SOX2-201ENST00000325404 HMGN5P82970 282 aaKnown RBP23.53■■□□□ 1.36
SOX2-201ENST00000325404 GTF3C6Q969F1 213 aa23.53■■□□□ 1.36
SOX2-201ENST00000325404 NEK1Q96PY6 1258 aa23.53■■□□□ 1.36
SOX2-201ENST00000325404 COL16A1Q07092 1604 aaPredicted RBP23.53■■□□□ 1.36
SOX2-201ENST00000325404 GOLGA6L6A8MZA4 724 aa23.52■■□□□ 1.35
SOX2-201ENST00000325404 TFCP2Q12800 502 aa23.52■■□□□ 1.35
SOX2-201ENST00000325404 MCMDC2Q4G0Z9 681 aa23.52■■□□□ 1.35
SOX2-201ENST00000325404 TAF6LQ9Y6J9 622 aa23.52■■□□□ 1.35
SOX2-201ENST00000325404 TOM1O60784 492 aa23.51■■□□□ 1.35
SOX2-201ENST00000325404 MYRIPQ8NFW9 859 aa23.51■■□□□ 1.35
SOX2-201ENST00000325404 LLPHQ9BRT6 129 aaKnown RBP23.51■■□□□ 1.35
SOX2-201ENST00000325404 PHLPP1O60346 1717 aa23.51■■□□□ 1.35
SOX2-201ENST00000325404 HMGB1P09429 215 aaKnown RBP23.51■■□□□ 1.35
SOX2-201ENST00000325404 CASP7P55210 303 aa23.51■■□□□ 1.35
SOX2-201ENST00000325404 COL9A3Q14050 684 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms