RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 DEKP35659 375 aaKnown RBP23.3■■□□□ 1.32
CHMP6-201ENST00000325167 BAG6P46379 1132 aa23.3■■□□□ 1.32
CHMP6-201ENST00000325167 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
CHMP6-201ENST00000325167 GBP4Q96PP9 640 aa23.3■■□□□ 1.32
CHMP6-201ENST00000325167 DDX11L8A8MPP1 907 aa23.29■■□□□ 1.32
CHMP6-201ENST00000325167 NUCB2P80303 420 aa23.29■■□□□ 1.32
CHMP6-201ENST00000325167 TNS1Q9HBL0 1735 aaKnown RBP23.29■■□□□ 1.32
CHMP6-201ENST00000325167 TLR7Q9NYK1 1049 aaKnown RBP23.29■■□□□ 1.32
CHMP6-201ENST00000325167 DBNLQ9UJU6 430 aaKnown RBP23.29■■□□□ 1.32
CHMP6-201ENST00000325167 MCM4P33991 863 aa23.28■■□□□ 1.32
CHMP6-201ENST00000325167 MARCH10Q8NA82 808 aaPredicted RBP23.28■■□□□ 1.32
CHMP6-201ENST00000325167 FSD1Q9BTV5 496 aa23.28■■□□□ 1.32
CHMP6-201ENST00000325167 BOLA2Q9H3K6 86 aa23.28■■□□□ 1.32
CHMP6-201ENST00000325167 ZBTB1Q9Y2K1 713 aa23.28■■□□□ 1.32
CHMP6-201ENST00000325167 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.28■■□□□ 1.32
CHMP6-201ENST00000325167 TRIM37O94972 964 aa23.28■■□□□ 1.32
CHMP6-201ENST00000325167 EN1Q05925 392 aaPredicted RBP23.28■■□□□ 1.32
CHMP6-201ENST00000325167 FAM196AQ6ZSG2 479 aa23.28■■□□□ 1.32
CHMP6-201ENST00000325167 ATG9AQ7Z3C6 839 aa23.28■■□□□ 1.32
CHMP6-201ENST00000325167 CSF1RP07333 972 aa23.27■■□□□ 1.32
CHMP6-201ENST00000325167 NLRP10Q86W26 655 aa23.27■■□□□ 1.32
CHMP6-201ENST00000325167 AK7Q96M32 723 aa23.27■■□□□ 1.32
CHMP6-201ENST00000325167 ANKRD36CQ5JPF3 1778 aa23.27■■□□□ 1.31
CHMP6-201ENST00000325167 DZIP3Q86Y13 1208 aaKnown RBP23.26■■□□□ 1.31
CHMP6-201ENST00000325167 ARXQ96QS3 562 aa23.26■■□□□ 1.31
CHMP6-201ENST00000325167 HAUS7Q99871 368 aa23.26■■□□□ 1.31
CHMP6-201ENST00000325167 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
CHMP6-201ENST00000325167 PALD1Q9ULE6 856 aa23.26■■□□□ 1.31
CHMP6-201ENST00000325167 AKAP2Q9Y2D5 859 aa23.26■■□□□ 1.31
CHMP6-201ENST00000325167 IL25Q9H293 177 aa23.25■■□□□ 1.31
CHMP6-201ENST00000325167 IFIT5Q13325 482 aaKnown RBP23.25■■□□□ 1.31
CHMP6-201ENST00000325167 GSE1Q14687 1217 aa23.25■■□□□ 1.31
CHMP6-201ENST00000325167 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.25■■□□□ 1.31
CHMP6-201ENST00000325167 KCNB2Q92953 911 aa23.25■■□□□ 1.31
CHMP6-201ENST00000325167 CEP126Q9P2H0 1117 aa23.25■■□□□ 1.31
CHMP6-201ENST00000325167 CCDC171Q6TFL3 1326 aa23.24■■□□□ 1.31
CHMP6-201ENST00000325167 LOC102724428A0A0B4J2F2 783 aa23.24■■□□□ 1.31
CHMP6-201ENST00000325167 HSP90B1P14625 803 aaKnown RBP23.24■■□□□ 1.31
CHMP6-201ENST00000325167 EIF5P55010 431 aaKnown RBP23.24■■□□□ 1.31
CHMP6-201ENST00000325167 SIK1P57059 783 aa23.24■■□□□ 1.31
CHMP6-201ENST00000325167 INTS4Q96HW7 963 aaKnown RBP23.24■■□□□ 1.31
CHMP6-201ENST00000325167 DBNDD2Q9BQY9 259 aa23.24■■□□□ 1.31
CHMP6-201ENST00000325167 ATP6V1AP38606 617 aa23.23■■□□□ 1.31
CHMP6-201ENST00000325167 TAF7LQ5H9L4 462 aa23.23■■□□□ 1.31
CHMP6-201ENST00000325167 TM6SF1Q9BZW5 370 aa23.23■■□□□ 1.31
CHMP6-201ENST00000325167 SNX14Q9Y5W7 946 aa23.23■■□□□ 1.31
CHMP6-201ENST00000325167 ZNF609O15014 1411 aa23.23■■□□□ 1.31
CHMP6-201ENST00000325167 RREB1Q92766 1687 aa23.23■■□□□ 1.31
CHMP6-201ENST00000325167 ZKSCAN1P17029 563 aaPredicted RBP23.22■■□□□ 1.31
CHMP6-201ENST00000325167 NMIQ13287 307 aaPredicted RBP23.22■■□□□ 1.31
CHMP6-201ENST00000325167 HLFQ16534 295 aa23.22■■□□□ 1.31
CHMP6-201ENST00000325167 CLEC17AQ6ZS10 378 aa23.22■■□□□ 1.31
CHMP6-201ENST00000325167 FAM89AQ96GI7 184 aa23.22■■□□□ 1.31
CHMP6-201ENST00000325167 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
CHMP6-201ENST00000325167 CUL4AQ13619 759 aa23.22■■□□□ 1.31
CHMP6-201ENST00000325167 RNF20Q5VTR2 975 aa23.22■■□□□ 1.31
CHMP6-201ENST00000325167 TNPO1Q92973 898 aaKnown RBP23.22■■□□□ 1.31
CHMP6-201ENST00000325167 TMX3Q96JJ7 454 aa23.22■■□□□ 1.31
CHMP6-201ENST00000325167 PALLDQ8WX93 1383 aa23.21■■□□□ 1.31
CHMP6-201ENST00000325167 LRRFIP1Q32MZ4 808 aaKnown RBP23.21■■□□□ 1.31
CHMP6-201ENST00000325167 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
CHMP6-201ENST00000325167 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
CHMP6-201ENST00000325167 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
CHMP6-201ENST00000325167 EZH2Q15910 746 aaKnown RBP23.2■■□□□ 1.3
CHMP6-201ENST00000325167 PARP10Q53GL7 1025 aa23.2■■□□□ 1.3
CHMP6-201ENST00000325167 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
CHMP6-201ENST00000325167 MAP4K1Q92918 833 aa23.2■■□□□ 1.3
CHMP6-201ENST00000325167 ACSBG1Q96GR2 724 aa23.2■■□□□ 1.3
CHMP6-201ENST00000325167 NEUROD6Q96NK8 337 aa23.2■■□□□ 1.3
CHMP6-201ENST00000325167 FOXD4L1Q9NU39 408 aa23.2■■□□□ 1.3
CHMP6-201ENST00000325167 GOLGA6L22H0YM25 854 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 PDE8AO60658 829 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 APBA3O96018 575 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 CRKLP46109 303 aaKnown RBP23.19■■□□□ 1.3
CHMP6-201ENST00000325167 CTSWP56202 376 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 TRMT112Q9UI30 125 aaKnown RBP23.19■■□□□ 1.3
CHMP6-201ENST00000325167 SPEF2Q9C093 1822 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 ANKRD18BA2A2Z9 1011 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 PSDA5PKW4 1024 aaPredicted RBP23.19■■□□□ 1.3
CHMP6-201ENST00000325167 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
CHMP6-201ENST00000325167 GPTP24298 496 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 LRRC24Q50LG9 513 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 KBTBD3Q8NAB2 608 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 HMG20BQ9P0W2 317 aa23.19■■□□□ 1.3
CHMP6-201ENST00000325167 ABCC12Q96J65 1359 aa23.18■■□□□ 1.3
CHMP6-201ENST00000325167 RGL2O15211 777 aa23.18■■□□□ 1.3
CHMP6-201ENST00000325167 PSMA5P28066 241 aa23.18■■□□□ 1.3
CHMP6-201ENST00000325167 KCNJ4P48050 445 aa23.18■■□□□ 1.3
CHMP6-201ENST00000325167 NECTIN1Q15223 517 aa23.18■■□□□ 1.3
CHMP6-201ENST00000325167 FAM227BQ96M60 508 aa23.18■■□□□ 1.3
CHMP6-201ENST00000325167 NUP98P52948 1817 aa23.18■■□□□ 1.3
CHMP6-201ENST00000325167 A0A1B0GUL7 405 aa23.17■■□□□ 1.3
CHMP6-201ENST00000325167 CCDC158Q5M9N0 1113 aa23.17■■□□□ 1.3
CHMP6-201ENST00000325167 TTLL11Q8NHH1 800 aa23.17■■□□□ 1.3
CHMP6-201ENST00000325167 ZNF594Q96JF6 807 aaPredicted RBP23.17■■□□□ 1.3
CHMP6-201ENST00000325167 TBC1D2BQ9UPU7 963 aa23.17■■□□□ 1.3
CHMP6-201ENST00000325167 PTH1RQ03431 593 aa23.16■■□□□ 1.3
CHMP6-201ENST00000325167 DNAJC2Q99543 621 aaKnown RBP23.16■■□□□ 1.3
CHMP6-201ENST00000325167 ZNF652Q9Y2D9 606 aa23.16■■□□□ 1.3
CHMP6-201ENST00000325167 RBM8AQ9Y5S9 174 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms