RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 HOXA10P31260 410 aaPredicted RBP29.78■■■□□ 2.36
TNFSF12-202ENST00000322272 RBM17Q96I25 401 aaKnown RBP29.78■■■□□ 2.36
TNFSF12-202ENST00000322272 NFKBIEO00221 500 aa29.78■■■□□ 2.36
TNFSF12-202ENST00000322272 CCDC191Q8NCU4 936 aa29.78■■■□□ 2.36
TNFSF12-202ENST00000322272 C7orf43Q8WVR3 580 aa29.78■■■□□ 2.36
TNFSF12-202ENST00000322272 SOGA3Q5TF21 947 aa29.77■■■□□ 2.36
TNFSF12-202ENST00000322272 RNF181Q9P0P0 153 aa29.77■■■□□ 2.36
TNFSF12-202ENST00000322272 CACNA1SQ13698 1873 aa29.77■■■□□ 2.36
TNFSF12-202ENST00000322272 NEXNQ0ZGT2 675 aa29.76■■■□□ 2.35
TNFSF12-202ENST00000322272 CWC25Q9NXE8 425 aaPredicted RBP29.76■■■□□ 2.35
TNFSF12-202ENST00000322272 ZBTB38Q8NAP3 1195 aaPredicted RBP29.75■■■□□ 2.35
TNFSF12-202ENST00000322272 F6X3S4 739 aa29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 CCT4P50991 539 aaKnown RBP29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 SLC4A10Q6U841 1118 aa29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 DNAAF4Q8WXU2 420 aa29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 CRAMP1Q96RY5 1269 aa29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 IGKV5-2P06315 115 aa29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 OLFM4Q6UX06 510 aa29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 ZBTB40Q9NUA8 1239 aa29.74■■■□□ 2.35
TNFSF12-202ENST00000322272 IRS4O14654 1257 aaPredicted RBP29.73■■■□□ 2.35
TNFSF12-202ENST00000322272 LMNB1P20700 586 aa29.73■■■□□ 2.35
TNFSF12-202ENST00000322272 CCDC93Q567U6 631 aa29.73■■■□□ 2.35
TNFSF12-202ENST00000322272 PRELPP51888 382 aa29.72■■■□□ 2.35
TNFSF12-202ENST00000322272 CENPQQ7L2Z9 268 aaPredicted RBP29.72■■■□□ 2.35
TNFSF12-202ENST00000322272 ZNF526Q8TF50 670 aaPredicted RBP29.72■■■□□ 2.35
TNFSF12-202ENST00000322272 TAOK3Q9H2K8 898 aa29.72■■■□□ 2.35
TNFSF12-202ENST00000322272 ZBTB7BO15156 539 aaPredicted RBP29.71■■■□□ 2.35
TNFSF12-202ENST00000322272 PCCAP05165 728 aaPredicted RBP29.71■■■□□ 2.35
TNFSF12-202ENST00000322272 CWF19L2Q2TBE0 894 aaKnown RBP29.71■■■□□ 2.35
TNFSF12-202ENST00000322272 KDM2BQ8NHM5 1336 aa29.71■■■□□ 2.35
TNFSF12-202ENST00000322272 JARID2Q92833 1246 aaPredicted RBP29.71■■■□□ 2.35
TNFSF12-202ENST00000322272 NEURL1BA8MQ27 555 aa29.69■■■□□ 2.34
TNFSF12-202ENST00000322272 PPEF1O14829 653 aaPredicted RBP29.69■■■□□ 2.34
TNFSF12-202ENST00000322272 DDX46Q7L014 1031 aaKnown RBP29.69■■■□□ 2.34
TNFSF12-202ENST00000322272 LTBP3Q9NS15 1303 aa29.69■■■□□ 2.34
TNFSF12-202ENST00000322272 RTKN2Q8IZC4 609 aa29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 GPBP1L1Q9HC44 474 aaPredicted RBP29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 PCDHB15Q9Y5E8 787 aa29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 FER1L6Q2WGJ9 1857 aa29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 DDX60Q8IY21 1712 aaKnown RBP29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 LAMB2P55268 1798 aa29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 HSP90B1P14625 803 aaKnown RBP29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 SF3B3Q15393 1217 aaKnown RBP29.67■■■□□ 2.34
TNFSF12-202ENST00000322272 SBF1O95248 1867 aa29.66■■■□□ 2.34
TNFSF12-202ENST00000322272 FKBP4Q02790 459 aaKnown RBP eCLIP29.65■■■□□ 2.34
TNFSF12-202ENST00000322272 SLC51AQ86UW1 340 aa29.65■■■□□ 2.34
TNFSF12-202ENST00000322272 LINS1Q8NG48 757 aa29.65■■■□□ 2.34
TNFSF12-202ENST00000322272 GRAPQ13588 217 aa29.64■■■□□ 2.34
TNFSF12-202ENST00000322272 CC2D2BQ6DHV5 1058 aa29.64■■■□□ 2.34
TNFSF12-202ENST00000322272 GRAPLQ8TC17 118 aaPredicted RBP29.64■■■□□ 2.34
TNFSF12-202ENST00000322272 SRCIN1Q9C0H9 1055 aa29.64■■■□□ 2.34
TNFSF12-202ENST00000322272 BBOX1O75936 387 aa29.63■■■□□ 2.33
TNFSF12-202ENST00000322272 GCKRQ14397 625 aa29.63■■■□□ 2.33
TNFSF12-202ENST00000322272 PDE8AO60658 829 aa29.63■■■□□ 2.33
TNFSF12-202ENST00000322272 TMX4Q9H1E5 349 aaPredicted RBP29.63■■■□□ 2.33
TNFSF12-202ENST00000322272 RWDD1Q9H446 243 aaPredicted RBP29.63■■■□□ 2.33
TNFSF12-202ENST00000322272 ATP6V0A2Q9Y487 856 aa29.63■■■□□ 2.33
TNFSF12-202ENST00000322272 CDHR2Q9BYE9 1310 aa29.63■■■□□ 2.33
TNFSF12-202ENST00000322272 BEND3Q5T5X7 828 aa29.62■■■□□ 2.33
TNFSF12-202ENST00000322272 UBE3BQ7Z3V4 1068 aa29.61■■■□□ 2.33
TNFSF12-202ENST00000322272 ZNF277Q9NRM2 450 aaPredicted RBP29.61■■■□□ 2.33
TNFSF12-202ENST00000322272 SNED1Q8TER0 1413 aa29.6■■■□□ 2.33
TNFSF12-202ENST00000322272 ZC3H4Q9UPT8 1303 aaKnown RBP29.6■■■□□ 2.33
TNFSF12-202ENST00000322272 ALDH1L1O75891 902 aa29.6■■■□□ 2.33
TNFSF12-202ENST00000322272 H7C1W4 665 aa29.6■■■□□ 2.33
TNFSF12-202ENST00000322272 CELF1Q92879 486 aaKnown RBP29.6■■■□□ 2.33
TNFSF12-202ENST00000322272 IGHDP01880 384 aa29.59■■■□□ 2.33
TNFSF12-202ENST00000322272 HDAC1Q13547 482 aaPredicted RBP29.59■■■□□ 2.33
TNFSF12-202ENST00000322272 GRIPAP1Q4V328 841 aa29.59■■■□□ 2.33
TNFSF12-202ENST00000322272 CCDC85AQ96PX6 553 aaPredicted RBP29.59■■■□□ 2.33
TNFSF12-202ENST00000322272 PSMD1Q99460 953 aa29.59■■■□□ 2.33
TNFSF12-202ENST00000322272 CCDC152Q4G0S7 254 aa29.58■■■□□ 2.33
TNFSF12-202ENST00000322272 SP8Q8IXZ3 490 aa29.57■■■□□ 2.32
TNFSF12-202ENST00000322272 MEIS3Q99687 375 aa29.57■■■□□ 2.32
TNFSF12-202ENST00000322272 SEC31BQ9NQW1 1179 aa29.56■■■□□ 2.32
TNFSF12-202ENST00000322272 CCDC88AQ3V6T2 1871 aa29.56■■■□□ 2.32
TNFSF12-202ENST00000322272 GNAI3P08754 354 aa29.56■■■□□ 2.32
TNFSF12-202ENST00000322272 CTSWP56202 376 aa29.56■■■□□ 2.32
TNFSF12-202ENST00000322272 C1orf115Q9H7X2 142 aa29.56■■■□□ 2.32
TNFSF12-202ENST00000322272 IARSP41252 1262 aaKnown RBP29.55■■■□□ 2.32
TNFSF12-202ENST00000322272 TMC4Q7Z404 712 aa29.55■■■□□ 2.32
TNFSF12-202ENST00000322272 TAF1P21675 1872 aa29.54■■■□□ 2.32
TNFSF12-202ENST00000322272 CASP7P55210 303 aa29.54■■■□□ 2.32
TNFSF12-202ENST00000322272 TIAM2Q8IVF5 1701 aa29.54■■■□□ 2.32
TNFSF12-202ENST00000322272 RPS8P62241 208 aaKnown RBP29.53■■■□□ 2.32
TNFSF12-202ENST00000322272 TTLL11Q8NHH1 800 aa29.53■■■□□ 2.32
TNFSF12-202ENST00000322272 C9orf78Q9NZ63 289 aaPredicted RBP29.53■■■□□ 2.32
TNFSF12-202ENST00000322272 GLTPD2A6NH11 291 aa29.53■■■□□ 2.32
TNFSF12-202ENST00000322272 NMRK2Q9NPI5 230 aa29.53■■■□□ 2.32
TNFSF12-202ENST00000322272 DPP8Q6V1X1 898 aaPredicted RBP29.52■■■□□ 2.32
TNFSF12-202ENST00000322272 MPNDQ8N594 471 aa29.52■■■□□ 2.32
TNFSF12-202ENST00000322272 COL4A1P02462 1669 aa29.52■■■□□ 2.32
TNFSF12-202ENST00000322272 DPY19L2Q6NUT2 758 aa29.5■■■□□ 2.31
TNFSF12-202ENST00000322272 PLA2G12BQ9BX93 195 aa29.5■■■□□ 2.31
TNFSF12-202ENST00000322272 GNAI2P04899 355 aa29.49■■■□□ 2.31
TNFSF12-202ENST00000322272 RPAP2Q8IXW5 612 aaPredicted RBP29.49■■■□□ 2.31
TNFSF12-202ENST00000322272 GREM2Q9H772 168 aa29.49■■■□□ 2.31
TNFSF12-202ENST00000322272 DICER1Q9UPY3 1922 aaKnown RBP29.49■■■□□ 2.31
TNFSF12-202ENST00000322272 GRM8O00222 908 aa29.49■■■□□ 2.31
TNFSF12-202ENST00000322272 KIF3CO14782 793 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms