RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 CREB3L3Q68CJ9 461 aa22.75■■□□□ 1.23
HCCS-201ENST00000321143 USP48Q86UV5 1035 aa22.75■■□□□ 1.23
HCCS-201ENST00000321143 ZSCAN31Q96LW9 406 aaPredicted RBP22.75■■□□□ 1.23
HCCS-201ENST00000321143 FSD1Q9BTV5 496 aa22.75■■□□□ 1.23
HCCS-201ENST00000321143 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
HCCS-201ENST00000321143 STX6O43752 255 aa22.74■■□□□ 1.23
HCCS-201ENST00000321143 PIGBQ92521 554 aa22.74■■□□□ 1.23
HCCS-201ENST00000321143 SYAP1Q96A49 352 aaPredicted RBP22.74■■□□□ 1.23
HCCS-201ENST00000321143 SYT1P21579 422 aa22.74■■□□□ 1.23
HCCS-201ENST00000321143 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
HCCS-201ENST00000321143 ASAP1Q9ULH1 1129 aa22.74■■□□□ 1.23
HCCS-201ENST00000321143 GADD45BO75293 160 aaPredicted RBP22.73■■□□□ 1.23
HCCS-201ENST00000321143 SH2B1Q9NRF2 756 aaPredicted RBP22.73■■□□□ 1.23
HCCS-201ENST00000321143 A0A0D9SFI3 127 aa22.73■■□□□ 1.23
HCCS-201ENST00000321143 RFX5P48382 616 aaPredicted RBP22.73■■□□□ 1.23
HCCS-201ENST00000321143 CCDC83Q8IWF9 413 aa22.73■■□□□ 1.23
HCCS-201ENST00000321143 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
HCCS-201ENST00000321143 GLI3P10071 1580 aa22.73■■□□□ 1.23
HCCS-201ENST00000321143 SPATA31A6Q5VVP1 1343 aa22.72■■□□□ 1.23
HCCS-201ENST00000321143 DDB1Q16531 1140 aa22.72■■□□□ 1.23
HCCS-201ENST00000321143 MARCH10Q8NA82 808 aaPredicted RBP22.72■■□□□ 1.23
HCCS-201ENST00000321143 TMEM87AQ8NBN3 555 aa22.72■■□□□ 1.23
HCCS-201ENST00000321143 USP21Q9UK80 565 aa22.72■■□□□ 1.23
HCCS-201ENST00000321143 PTPN12Q05209 780 aaKnown RBP22.71■■□□□ 1.23
HCCS-201ENST00000321143 UBE3BQ7Z3V4 1068 aa22.71■■□□□ 1.23
HCCS-201ENST00000321143 SYTL4Q96C24 671 aaPredicted RBP22.71■■□□□ 1.23
HCCS-201ENST00000321143 COL15A1P39059 1388 aa22.71■■□□□ 1.23
HCCS-201ENST00000321143 SLC27A2O14975 620 aa22.71■■□□□ 1.23
HCCS-201ENST00000321143 RABL6Q3YEC7 729 aaPredicted RBP22.71■■□□□ 1.23
HCCS-201ENST00000321143 TMOD3Q9NYL9 352 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 MED23Q9ULK4 1368 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 ATP5J2-PTCD1G3V325 749 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 F13A1P00488 732 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 PSMA5P28066 241 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 GJB2P29033 226 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 ACSBG1Q96GR2 724 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 THRAP3Q9Y2W1 955 aaKnown RBP22.7■■□□□ 1.22
HCCS-201ENST00000321143 TNS2Q63HR2 1409 aa22.7■■□□□ 1.22
HCCS-201ENST00000321143 A0A087WZG4 1122 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 TNNI3KQ59H18 835 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 PLBD2Q8NHP8 589 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 PDLIM2Q96JY6 352 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 CNPY2Q9Y2B0 182 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 FPGT-TNNI3KV9GXZ4 949 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 AFDNP55196 1824 aaKnown RBP22.69■■□□□ 1.22
HCCS-201ENST00000321143 A0A0G2JS52 829 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 TFCP2Q12800 502 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 MEX3CQ5U5Q3 659 aaKnown RBP22.69■■□□□ 1.22
HCCS-201ENST00000321143 RNF20Q5VTR2 975 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 DBNLQ9UJU6 430 aaKnown RBP22.69■■□□□ 1.22
HCCS-201ENST00000321143 ATP6V1DQ9Y5K8 247 aa22.69■■□□□ 1.22
HCCS-201ENST00000321143 ATP5JP18859 108 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 VPS72Q15906 364 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 ME3Q16798 604 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 ARFGEF2Q9Y6D5 1785 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 KCPQ6ZWJ8 1503 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 UBR2Q8IWV8 1755 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 PHF14O94880 888 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 ZSCAN30Q86W11 494 aa22.68■■□□□ 1.22
HCCS-201ENST00000321143 ST3GAL1Q11201 340 aa22.67■■□□□ 1.22
HCCS-201ENST00000321143 BARGINQ6ZT62 677 aa22.67■■□□□ 1.22
HCCS-201ENST00000321143 TSPY26PQ9H489 355 aa22.67■■□□□ 1.22
HCCS-201ENST00000321143 ATG3Q9NT62 314 aa22.67■■□□□ 1.22
HCCS-201ENST00000321143 TCHHQ07283 1943 aa22.67■■□□□ 1.22
HCCS-201ENST00000321143 CASP7P55210 303 aa22.66■■□□□ 1.22
HCCS-201ENST00000321143 FAM182BQ5T319 152 aa22.66■■□□□ 1.22
HCCS-201ENST00000321143 EDC3Q96F86 508 aaKnown RBP22.66■■□□□ 1.22
HCCS-201ENST00000321143 PAPPAQ13219 1627 aa22.66■■□□□ 1.22
HCCS-201ENST00000321143 HS1BP3Q53T59 392 aa22.66■■□□□ 1.22
HCCS-201ENST00000321143 ZNF589Q86UQ0 364 aaPredicted RBP22.66■■□□□ 1.22
HCCS-201ENST00000321143 TPCN1Q9ULQ1 816 aa22.66■■□□□ 1.22
HCCS-201ENST00000321143 LAMB4A4D0S4 1761 aa22.66■■□□□ 1.22
HCCS-201ENST00000321143 DOT1LQ8TEK3 1739 aa22.65■■□□□ 1.22
HCCS-201ENST00000321143 MTMR6Q9Y217 621 aa22.65■■□□□ 1.22
HCCS-201ENST00000321143 AFF2P51816 1311 aa22.65■■□□□ 1.22
HCCS-201ENST00000321143 BLOC1S2Q6QNY1 142 aa22.65■■□□□ 1.22
HCCS-201ENST00000321143 NECAB1Q8N987 351 aa22.65■■□□□ 1.22
HCCS-201ENST00000321143 A1BGP04217 495 aa22.64■■□□□ 1.22
HCCS-201ENST00000321143 RNF214Q8ND24 703 aa22.64■■□□□ 1.22
HCCS-201ENST00000321143 NAP1L5Q96NT1 182 aaPredicted RBP22.64■■□□□ 1.22
HCCS-201ENST00000321143 HMG20BQ9P0W2 317 aa22.64■■□□□ 1.22
HCCS-201ENST00000321143 UBE2HP62256 183 aa22.64■■□□□ 1.21
HCCS-201ENST00000321143 SLC4A9Q96Q91 983 aa22.64■■□□□ 1.21
HCCS-201ENST00000321143 NBPF26B4DH59 902 aa22.63■■□□□ 1.21
HCCS-201ENST00000321143 KCNQ2O43526 872 aa22.63■■□□□ 1.21
HCCS-201ENST00000321143 TAF5LO75529 589 aa22.63■■□□□ 1.21
HCCS-201ENST00000321143 ANKRD1Q15327 319 aa22.63■■□□□ 1.21
HCCS-201ENST00000321143 NBPF14Q5TI25 921 aa22.63■■□□□ 1.21
HCCS-201ENST00000321143 NBPF10Q6P3W6 841 aaKnown RBP22.63■■□□□ 1.21
HCCS-201ENST00000321143 NBPF15Q8N660 670 aa22.63■■□□□ 1.21
HCCS-201ENST00000321143 CDCA7Q9BWT1 371 aaPredicted RBP22.63■■□□□ 1.21
HCCS-201ENST00000321143 BCL9O00512 1426 aa22.63■■□□□ 1.21
HCCS-201ENST00000321143 DTNBO60941 627 aa22.62■■□□□ 1.21
HCCS-201ENST00000321143 RPS6KB1P23443 525 aa22.62■■□□□ 1.21
HCCS-201ENST00000321143 COL9A3Q14050 684 aaPredicted RBP22.62■■□□□ 1.21
HCCS-201ENST00000321143 LMBR1LQ6UX01 489 aa22.62■■□□□ 1.21
HCCS-201ENST00000321143 PTF1AQ7RTS3 328 aa22.62■■□□□ 1.21
HCCS-201ENST00000321143 DBNDD2Q9BQY9 259 aa22.62■■□□□ 1.21
HCCS-201ENST00000321143 FIBPO43427 364 aa22.62■■□□□ 1.21
HCCS-201ENST00000321143 TSGA10IPQ3SY00 556 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms