RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 LRP2BPQ9P2M1 347 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 KIF1BO60333 1816 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 ORC3Q9UBD5 711 aaPredicted RBP17.92■□□□□ 0.46
GCFC2-201ENST00000321027 NOL7Q9UMY1 257 aaKnown RBP17.92■□□□□ 0.46
GCFC2-201ENST00000321027 ZNF213O14771 459 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 PRIMPOLQ96LW4 560 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 TSPOAP1O95153 1857 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 H0YHG0 523 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 ODF2Q5BJF6 829 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 CTAGE5O15320 804 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 CBFA2T2O43439 604 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 Q6ZUG5 572 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 C17orf53Q8N3J3 647 aaPredicted RBP17.91■□□□□ 0.46
GCFC2-201ENST00000321027 UBAC1Q9BSL1 405 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 CLTCL1P53675 1640 aa17.91■□□□□ 0.46
GCFC2-201ENST00000321027 TYRO3Q06418 890 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 KLHL10Q6JEL2 608 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 LMBR1LQ6UX01 489 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 LDHAL6AQ6ZMR3 332 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 ROBO2Q9HCK4 1378 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 ERICH4A6NGS2 130 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 SLC3A2P08195 630 aaKnown RBP17.9■□□□□ 0.46
GCFC2-201ENST00000321027 CHST3Q7LGC8 479 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
GCFC2-201ENST00000321027 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 KLHDC4Q8TBB5 520 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 ERCC4Q92889 916 aaPredicted RBP17.9■□□□□ 0.46
GCFC2-201ENST00000321027 NGLY1Q96IV0 654 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 RAI14Q9P0K7 980 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 SNX14Q9Y5W7 946 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 URI1O94763 535 aaPredicted RBP17.9■□□□□ 0.46
GCFC2-201ENST00000321027 STX1AQ16623 288 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 HSP90AB3PQ58FF7 597 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 LUZP1Q86V48 1076 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 ZHX3Q9H4I2 956 aa17.9■□□□□ 0.46
GCFC2-201ENST00000321027 ZNHIT6Q9NWK9 470 aaKnown RBP17.9■□□□□ 0.46
GCFC2-201ENST00000321027 FSD2A1L4K1 749 aa17.89■□□□□ 0.45
GCFC2-201ENST00000321027 KRT18P05783 430 aaKnown RBP17.89■□□□□ 0.45
GCFC2-201ENST00000321027 TMC6Q7Z403 805 aa17.89■□□□□ 0.45
GCFC2-201ENST00000321027 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
GCFC2-201ENST00000321027 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
GCFC2-201ENST00000321027 UNC13BO14795 1591 aa17.89■□□□□ 0.45
GCFC2-201ENST00000321027 TTC41PQ6P2S7 1318 aa17.89■□□□□ 0.45
GCFC2-201ENST00000321027 SGSM2O43147 1006 aa17.89■□□□□ 0.45
GCFC2-201ENST00000321027 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
GCFC2-201ENST00000321027 PTGS1P23219 599 aa17.88■□□□□ 0.45
GCFC2-201ENST00000321027 CCDC66A2RUB6 948 aa17.88■□□□□ 0.45
GCFC2-201ENST00000321027 MICU3Q86XE3 530 aa17.88■□□□□ 0.45
GCFC2-201ENST00000321027 DCAF5Q96JK2 942 aa17.88■□□□□ 0.45
GCFC2-201ENST00000321027 ANKRD18BA2A2Z9 1011 aa17.88■□□□□ 0.45
GCFC2-201ENST00000321027 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
GCFC2-201ENST00000321027 TMX1Q9H3N1 280 aa17.88■□□□□ 0.45
GCFC2-201ENST00000321027 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 MINDY4BA8MYZ0 360 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 NOM1Q5C9Z4 860 aaKnown RBP17.87■□□□□ 0.45
GCFC2-201ENST00000321027 RUFY3Q7L099 469 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 NAPBQ9H115 298 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 DDX21Q9NR30 783 aaKnown RBP eCLIP17.87■□□□□ 0.45
GCFC2-201ENST00000321027 IL2RBP14784 551 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 ZSCAN16Q9H4T2 348 aaPredicted RBP17.87■□□□□ 0.45
GCFC2-201ENST00000321027 DACH1Q9UI36 760 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 CCDC171Q6TFL3 1326 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 FAM227BQ96M60 508 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 BICC1Q9H694 974 aaKnown RBP17.87■□□□□ 0.45
GCFC2-201ENST00000321027 ZNF652Q9Y2D9 606 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 CROCC2H7BZ55 1655 aa17.87■□□□□ 0.45
GCFC2-201ENST00000321027 BRD1O95696 1058 aa17.86■□□□□ 0.45
GCFC2-201ENST00000321027 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
GCFC2-201ENST00000321027 TOP1P11387 765 aaKnown RBP17.86■□□□□ 0.45
GCFC2-201ENST00000321027 DHX8Q14562 1220 aaKnown RBP17.86■□□□□ 0.45
GCFC2-201ENST00000321027 HSP90AA4PQ58FG1 418 aa17.86■□□□□ 0.45
GCFC2-201ENST00000321027 ZNF790Q6PG37 636 aa17.86■□□□□ 0.45
GCFC2-201ENST00000321027 SKILP12757 684 aa17.86■□□□□ 0.45
GCFC2-201ENST00000321027 MCMDC2Q4G0Z9 681 aa17.86■□□□□ 0.45
GCFC2-201ENST00000321027 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
GCFC2-201ENST00000321027 KLF18A0A0U1RQI7 1052 aa17.85■□□□□ 0.45
GCFC2-201ENST00000321027 DEF6Q9H4E7 631 aa17.85■□□□□ 0.45
GCFC2-201ENST00000321027 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.85■□□□□ 0.45
GCFC2-201ENST00000321027 V9GYY5 206 aaPredicted RBP17.85■□□□□ 0.45
GCFC2-201ENST00000321027 SSBP05455 408 aaKnown RBP eCLIP17.85■□□□□ 0.45
GCFC2-201ENST00000321027 CNNM3Q8NE01 707 aa17.85■□□□□ 0.45
GCFC2-201ENST00000321027 TSPYL1Q9H0U9 437 aa17.85■□□□□ 0.45
GCFC2-201ENST00000321027 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
GCFC2-201ENST00000321027 GPT2Q8TD30 523 aa17.85■□□□□ 0.45
GCFC2-201ENST00000321027 PLEKHG1Q9ULL1 1385 aa17.85■□□□□ 0.45
GCFC2-201ENST00000321027 CWC15Q9P013 229 aaKnown RBP17.84■□□□□ 0.45
GCFC2-201ENST00000321027 RAD50Q92878 1312 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 CEP135Q66GS9 1140 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 CPLX3Q8WVH0 158 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 NDUFB9Q9Y6M9 179 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 KIF2AO00139 706 aaPredicted RBP17.84■□□□□ 0.45
GCFC2-201ENST00000321027 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
GCFC2-201ENST00000321027 STIM1Q13586 685 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 TANGO6Q9C0B7 1094 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
GCFC2-201ENST00000321027 BABAM1Q9NWV8 329 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms