RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 KIF5CO60282 957 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 ARL1P40616 181 aaPredicted RBP10.18□□□□□ -0.78
SSBP2-201ENST00000320672 TSG101Q99816 390 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 ECHDC1Q9NTX5 307 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 MFSD6Q6ZSS7 791 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 KRT32Q14532 448 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 NBPF6Q5VWK0 638 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 NBPF5PQ86XG9 351 aaPredicted RBP10.17□□□□□ -0.78
SSBP2-201ENST00000320672 NBPF4Q96M43 638 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 ALG1Q9BT22 464 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 TRIM47Q96LD4 638 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 NIP7Q9Y221 180 aaKnown RBP eCLIP10.17□□□□□ -0.78
SSBP2-201ENST00000320672 MRVI1Q9Y6F6 885 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 ZNF165P49910 485 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 PTPN21Q16825 1174 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 MTHFSDQ2M296 383 aaKnown RBP10.17□□□□□ -0.78
SSBP2-201ENST00000320672 CCP110O43303 1012 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 PRDM1O75626 825 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 SLC9C2Q5TAH2 1124 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 STAMQ92783 540 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 CUL5Q93034 780 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 CWC25Q9NXE8 425 aaPredicted RBP10.17□□□□□ -0.78
SSBP2-201ENST00000320672 DACT1Q9NYF0 836 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 TIMM10P62072 90 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 DNAI1Q9UI46 699 aa10.17□□□□□ -0.78
SSBP2-201ENST00000320672 TFCP2Q12800 502 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 SMC1AQ14683 1233 aaKnown RBP10.16□□□□□ -0.78
SSBP2-201ENST00000320672 RAD51AP2Q09MP3 1159 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 TMEM87AQ8NBN3 555 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 MCM7P33993 719 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 TTC22Q5TAA0 569 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 CEP131Q9UPN4 1083 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 CUX1P39880 1505 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 LZTFL1Q9NQ48 299 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 ARHGEF11O15085 1522 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 MCM6Q14566 821 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 NSFL1CQ9UNZ2 370 aaKnown RBP10.16□□□□□ -0.78
SSBP2-201ENST00000320672 N4BP3O15049 544 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 TSPY3P0CV98 308 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 TSPY8P0CW00 308 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 HMGN5P82970 282 aaKnown RBP10.16□□□□□ -0.78
SSBP2-201ENST00000320672 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
SSBP2-201ENST00000320672 DDX39AO00148 427 aaKnown RBP10.16□□□□□ -0.78
SSBP2-201ENST00000320672 CHMP2AO43633 222 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 COBLO75128 1261 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 WASF1Q92558 559 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 DBF4Q9UBU7 674 aaPredicted RBP10.16□□□□□ -0.78
SSBP2-201ENST00000320672 GJA3Q9Y6H8 435 aa10.16□□□□□ -0.78
SSBP2-201ENST00000320672 HFM1A2PYH4 1435 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 RHOXF2BP0C7M4 288 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 RHOXF2Q9BQY4 288 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 NCOA5Q9HCD5 579 aaKnown RBP10.15□□□□□ -0.78
SSBP2-201ENST00000320672 TFCP2L1Q9NZI6 479 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 TAF5LO75529 589 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 EIF3JO75822 258 aaKnown RBP10.15□□□□□ -0.78
SSBP2-201ENST00000320672 FERMT2Q96AC1 680 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 UBA7P41226 1012 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 MAGEB6Q8N7X4 407 aa10.15□□□□□ -0.78
SSBP2-201ENST00000320672 PRIM1P49642 420 aaKnown RBP10.15□□□□□ -0.79
SSBP2-201ENST00000320672 PHACTR3Q96KR7 559 aa10.15□□□□□ -0.79
SSBP2-201ENST00000320672 GINS2Q9Y248 185 aa10.15□□□□□ -0.79
SSBP2-201ENST00000320672 SNW1Q13573 536 aaKnown RBP10.14□□□□□ -0.79
SSBP2-201ENST00000320672 EDC3Q96F86 508 aaKnown RBP10.14□□□□□ -0.79
SSBP2-201ENST00000320672 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 ZNF174Q15697 407 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 NF2P35240 595 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 TNNI2P48788 182 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 CEP135Q66GS9 1140 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 TSC1Q92574 1164 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 UBASH3AP57075 661 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 WTAPQ15007 396 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 IFIT1BQ5T764 474 aaKnown RBP10.14□□□□□ -0.79
SSBP2-201ENST00000320672 EVI5LQ96CN4 794 aa10.14□□□□□ -0.79
SSBP2-201ENST00000320672 FAM182BQ5T319 152 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
SSBP2-201ENST00000320672 TNIP1Q15025 636 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 KIF18AQ8NI77 898 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 PSMB7Q99436 277 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 TBC1D7Q9P0N9 293 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 FAM89AQ96GI7 184 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 TLDC2A0PJX2 215 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 TMEM266Q2M3C6 531 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 NOS1P29475 1434 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 YEATS4O95619 227 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 PPP1R9BQ96SB3 815 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 KCNH5Q8NCM2 988 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 SIRT1Q96EB6 747 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 SYKP43405 635 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 CTR9Q6PD62 1173 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 NCOA7Q8NI08 942 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 TCHPQ9BT92 498 aa10.13□□□□□ -0.79
SSBP2-201ENST00000320672 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.13□□□□□ -0.793e-6■■□□□ 12.3
SSBP2-201ENST00000320672 CCT6AP40227 531 aaKnown RBP10.12□□□□□ -0.79
SSBP2-201ENST00000320672 CCDC25Q86WR0 208 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 CALML4Q96GE6 196 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 DAPK1P53355 1430 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 A0A1B0GVL5 298 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms