RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SPEF2Q9C093 1822 aa16.94■□□□□ 0.3
PRPF18-201ENST00000320054 ST5P78524 1137 aa16.94■□□□□ 0.3
PRPF18-201ENST00000320054 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
PRPF18-201ENST00000320054 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
PRPF18-201ENST00000320054 TAF1P21675 1872 aa16.93■□□□□ 0.3
PRPF18-201ENST00000320054 NPHP1O15259 732 aa16.93■□□□□ 0.3
PRPF18-201ENST00000320054 GCC1Q96CN9 775 aa16.93■□□□□ 0.3
PRPF18-201ENST00000320054 NLRP3Q96P20 1036 aa16.93■□□□□ 0.3
PRPF18-201ENST00000320054 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
PRPF18-201ENST00000320054 DCTPP1Q9H773 170 aa16.93■□□□□ 0.3
PRPF18-201ENST00000320054 RFX5P48382 616 aaPredicted RBP16.92■□□□□ 0.3
PRPF18-201ENST00000320054 CCDC152Q4G0S7 254 aa16.92■□□□□ 0.3
PRPF18-201ENST00000320054 SMC5Q8IY18 1101 aa16.92■□□□□ 0.3
PRPF18-201ENST00000320054 COL11A2P13942 1736 aaPredicted RBP16.91■□□□□ 0.3
PRPF18-201ENST00000320054 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
PRPF18-201ENST00000320054 COPRSQ9NQ92 184 aa16.91■□□□□ 0.3
PRPF18-201ENST00000320054 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
PRPF18-201ENST00000320054 DLEC1Q9Y238 1755 aa16.91■□□□□ 0.3
PRPF18-201ENST00000320054 LRP5O75197 1615 aa16.91■□□□□ 0.3
PRPF18-201ENST00000320054 KLRG2A4D1S0 409 aaPredicted RBP16.9■□□□□ 0.3
PRPF18-201ENST00000320054 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
PRPF18-201ENST00000320054 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
PRPF18-201ENST00000320054 CCDC57Q2TAC2 916 aa16.9■□□□□ 0.3
PRPF18-201ENST00000320054 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
PRPF18-201ENST00000320054 GREM2Q9H772 168 aa16.9■□□□□ 0.3
PRPF18-201ENST00000320054 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
PRPF18-201ENST00000320054 A0A1B0GUL6 1792 aa16.89■□□□□ 0.3
PRPF18-201ENST00000320054 ANKRD18BA2A2Z9 1011 aa16.89■□□□□ 0.29
PRPF18-201ENST00000320054 ZBTB7AO95365 584 aa16.89■□□□□ 0.29
PRPF18-201ENST00000320054 PTPN12Q05209 780 aaKnown RBP16.89■□□□□ 0.29
PRPF18-201ENST00000320054 CRY2Q49AN0 593 aa16.89■□□□□ 0.29
PRPF18-201ENST00000320054 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
PRPF18-201ENST00000320054 C3orf67Q6ZVT6 689 aa16.89■□□□□ 0.29
PRPF18-201ENST00000320054 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
PRPF18-201ENST00000320054 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
PRPF18-201ENST00000320054 C10orf71Q711Q0 1435 aa16.88■□□□□ 0.29
PRPF18-201ENST00000320054 SURF6O75683 361 aaKnown RBP16.88■□□□□ 0.29
PRPF18-201ENST00000320054 ITGA6P23229 1130 aa16.88■□□□□ 0.29
PRPF18-201ENST00000320054 CACNA1SQ13698 1873 aa16.87■□□□□ 0.29
PRPF18-201ENST00000320054 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
PRPF18-201ENST00000320054 POLD1P28340 1107 aa16.87■□□□□ 0.29
PRPF18-201ENST00000320054 PDE6BP35913 854 aa16.87■□□□□ 0.29
PRPF18-201ENST00000320054 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
PRPF18-201ENST00000320054 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
PRPF18-201ENST00000320054 CIAO1O76071 339 aa16.86■□□□□ 0.29
PRPF18-201ENST00000320054 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
PRPF18-201ENST00000320054 CDC5LQ99459 802 aaKnown RBP16.86■□□□□ 0.29
PRPF18-201ENST00000320054 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
PRPF18-201ENST00000320054 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
PRPF18-201ENST00000320054 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
PRPF18-201ENST00000320054 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
PRPF18-201ENST00000320054 KIAA1551Q9HCM1 1747 aa16.86■□□□□ 0.29
PRPF18-201ENST00000320054 COL4A1P02462 1669 aa16.85■□□□□ 0.29
PRPF18-201ENST00000320054 EYA2O00167 538 aa16.85■□□□□ 0.29
PRPF18-201ENST00000320054 SOCS7O14512 581 aa16.85■□□□□ 0.29
PRPF18-201ENST00000320054 HOXA10P31260 410 aaPredicted RBP16.85■□□□□ 0.29
PRPF18-201ENST00000320054 G3BP1Q13283 466 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRPF18-201ENST00000320054 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
PRPF18-201ENST00000320054 DDX46Q7L014 1031 aaKnown RBP16.85■□□□□ 0.29
PRPF18-201ENST00000320054 KLHDC4Q8TBB5 520 aa16.85■□□□□ 0.29
PRPF18-201ENST00000320054 SEC31BQ9NQW1 1179 aa16.85■□□□□ 0.29
PRPF18-201ENST00000320054 NUCB1Q02818 461 aa16.84■□□□□ 0.29
PRPF18-201ENST00000320054 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
PRPF18-201ENST00000320054 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
PRPF18-201ENST00000320054 LRRC37AA6NMS7 1700 aa16.84■□□□□ 0.29
PRPF18-201ENST00000320054 IL15P40933 162 aaPredicted RBP16.83■□□□□ 0.28
PRPF18-201ENST00000320054 OS9Q13438 667 aaPredicted RBP16.83■□□□□ 0.28
PRPF18-201ENST00000320054 ATG9AQ7Z3C6 839 aa16.83■□□□□ 0.28
PRPF18-201ENST00000320054 ANKRD18AQ8IVF6 992 aa16.83■□□□□ 0.28
PRPF18-201ENST00000320054 KIF1BPQ96EK5 621 aa16.83■□□□□ 0.28
PRPF18-201ENST00000320054 RBM17Q96I25 401 aaKnown RBP16.83■□□□□ 0.28
PRPF18-201ENST00000320054 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
PRPF18-201ENST00000320054 LRRCC1Q9C099 1032 aa16.83■□□□□ 0.28
PRPF18-201ENST00000320054 SIL1Q9H173 461 aa16.83■□□□□ 0.28
PRPF18-201ENST00000320054 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
PRPF18-201ENST00000320054 SRGNP10124 158 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 NPR1P16066 1061 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
PRPF18-201ENST00000320054 PTGER2P43116 358 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 GRAPQ13588 217 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 LDHAL6AQ6ZMR3 332 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
PRPF18-201ENST00000320054 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 RIPOR2Q9Y4F9 1068 aa16.82■□□□□ 0.28
PRPF18-201ENST00000320054 SASH1O94885 1247 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
PRPF18-201ENST00000320054 LRRC24Q50LG9 513 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 CHD1LQ86WJ1 897 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 MASTLQ96GX5 879 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 MPHOSPH8Q99549 860 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 PUS3Q9BZE2 481 aaKnown RBP16.81■□□□□ 0.28
PRPF18-201ENST00000320054 SPON1Q9HCB6 807 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 CNNM1Q9NRU3 951 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 BSDC1Q9NW68 430 aaPredicted RBP16.81■□□□□ 0.28
PRPF18-201ENST00000320054 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
PRPF18-201ENST00000320054 ARAP2Q8WZ64 1704 aa16.81■□□□□ 0.28
PRPF18-201ENST00000320054 MROH5Q6ZUA9 1318 aa16.8■□□□□ 0.28
PRPF18-201ENST00000320054 H0YIN7 160 aa16.8■□□□□ 0.28
PRPF18-201ENST00000320054 STYK1Q6J9G0 422 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms