RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.2
FARP1-201ENST00000319562 CEP128Q6ZU80 1094 aa13.83□□□□□ -0.2
FARP1-201ENST00000319562 CLCN1P35523 988 aa13.83□□□□□ -0.2
FARP1-201ENST00000319562 ATP5DP30049 168 aa13.83□□□□□ -0.2
FARP1-201ENST00000319562 SUPT6HQ7KZ85 1726 aaKnown RBP13.83□□□□□ -0.2
FARP1-201ENST00000319562 VAV2P52735 878 aa13.83□□□□□ -0.2
FARP1-201ENST00000319562 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
FARP1-201ENST00000319562 TMEM67Q5HYA8 995 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 CFAP157Q5JU67 520 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 VCX3BQ9H321 246 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.82□□□□□ -0.23e-7■■□□□ 13.1
FARP1-201ENST00000319562 TMPOP42166 694 aaKnown RBP13.82□□□□□ -0.2
FARP1-201ENST00000319562 CHMP4BP1P59074 171 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 PDE4BQ07343 736 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 NAA25Q14CX7 972 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 BICD1Q96G01 975 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 TSGA10Q9BZW7 698 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 VPS18Q9P253 973 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 MTRF1LQ9UGC7 380 aaKnown RBP13.82□□□□□ -0.2
FARP1-201ENST00000319562 A6NNZ2 444 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 STAT6P42226 847 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 TUBB8Q3ZCM7 444 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 RASSF4Q9H2L5 321 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 TFIP11Q9UBB9 837 aaKnown RBP13.82□□□□□ -0.2
FARP1-201ENST00000319562 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
FARP1-201ENST00000319562 SNX16P57768 344 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 ERCC6LQ2NKX8 1250 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 CCDC94Q9BW85 323 aaPredicted RBP13.82□□□□□ -0.2
FARP1-201ENST00000319562 CCDC50Q8IVM0 306 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 FMNL3Q8IVF7 1028 aa13.82□□□□□ -0.2
FARP1-201ENST00000319562 FAM76AQ8TAV0 307 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 ZEB2O60315 1214 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 HDXQ7Z353 690 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 SAMM50Q9Y512 469 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 HMGB1P1B2RPK0 211 aaPredicted RBP13.81□□□□□ -0.2
FARP1-201ENST00000319562 CFAP70Q5T0N1 1121 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 ANO6Q4KMQ2 910 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 ISM2Q6H9L7 571 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
FARP1-201ENST00000319562 GBP1P32455 592 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 DUSP27Q5VZP5 1158 aa13.81□□□□□ -0.2
FARP1-201ENST00000319562 SEC62Q99442 399 aaKnown RBP13.8□□□□□ -0.2
FARP1-201ENST00000319562 RTEL1-TNFRSF6BF6WH68 1400 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 PSMA7O14818 248 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 KAT14Q9H8E8 782 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
FARP1-201ENST00000319562 USH1CQ9Y6N9 552 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 PTPRCP08575 1304 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 INTS8Q75QN2 995 aaKnown RBP13.8□□□□□ -0.2
FARP1-201ENST00000319562 SYT1P21579 422 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 FAM200AQ8TCP9 573 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 FAM184BQ9ULE4 1060 aa13.8□□□□□ -0.2
FARP1-201ENST00000319562 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
FARP1-201ENST00000319562 MFSD6Q6ZSS7 791 aa13.79□□□□□ -0.2
FARP1-201ENST00000319562 CASQ2O14958 399 aaPredicted RBP13.79□□□□□ -0.2
FARP1-201ENST00000319562 ORC3Q9UBD5 711 aaPredicted RBP13.79□□□□□ -0.2
FARP1-201ENST00000319562 ERICH3Q5RHP9 1530 aa13.79□□□□□ -0.2
FARP1-201ENST00000319562 ZPR1O75312 459 aa13.79□□□□□ -0.2
FARP1-201ENST00000319562 NCOA7Q8NI08 942 aa13.79□□□□□ -0.2
FARP1-201ENST00000319562 HS1BP3Q53T59 392 aa13.79□□□□□ -0.2
FARP1-201ENST00000319562 GBP7Q8N8V2 638 aaPredicted RBP13.79□□□□□ -0.2
FARP1-201ENST00000319562 ZNF354CQ86Y25 554 aa13.79□□□□□ -0.2
FARP1-201ENST00000319562 ZSCAN22P10073 491 aaPredicted RBP13.79□□□□□ -0.2
FARP1-201ENST00000319562 SARNPP82979 210 aaKnown RBP13.79□□□□□ -0.2
FARP1-201ENST00000319562 TRAF1Q13077 416 aa13.79□□□□□ -0.2
FARP1-201ENST00000319562 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
FARP1-201ENST00000319562 GIMAP6Q6P9H5 292 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 NEK1Q96PY6 1258 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 GAS8O95995 478 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 RRAGBQ5VZM2 374 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 IMPG2Q9BZV3 1241 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 BAG3O95817 575 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 OGFRQ9NZT2 677 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
FARP1-201ENST00000319562 PCK1P35558 622 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 MSANTD4Q8NCY6 345 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 EPSTI1Q96J88 318 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 PHACTR2O75167 634 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 MMRN2Q9H8L6 949 aa13.78□□□□□ -0.2
FARP1-201ENST00000319562 C10orf67Q8IYJ2 551 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 KCNK9Q9NPC2 374 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 TXNDC2Q86VQ3 553 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 SLC26A6Q9BXS9 759 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 NKIRAS1Q9NYS0 192 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 NCOA2Q15596 1464 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 MTUS1Q9ULD2 1270 aa13.77□□□□□ -0.2
FARP1-201ENST00000319562 BICDL2A1A5D9 508 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms