RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 ZSCAN31Q96LW9 406 aaPredicted RBP24.76■■□□□ 1.55
CPNE7-202ENST00000319518 CCDC8Q9H0W5 538 aaPredicted RBP24.76■■□□□ 1.55
CPNE7-202ENST00000319518 TAF6LQ9Y6J9 622 aa24.76■■□□□ 1.55
CPNE7-202ENST00000319518 UTYO14607 1347 aa24.76■■□□□ 1.55
CPNE7-202ENST00000319518 NEURL1BA8MQ27 555 aa24.75■■□□□ 1.55
CPNE7-202ENST00000319518 AP5Z1O43299 807 aa24.75■■□□□ 1.55
CPNE7-202ENST00000319518 PCDH11XQ9BZA7 1347 aa24.75■■□□□ 1.55
CPNE7-202ENST00000319518 PCDH11YQ9BZA8 1340 aa24.75■■□□□ 1.55
CPNE7-202ENST00000319518 A0A0D9SFI3 127 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 ANKRD13DQ6ZTN6 518 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 FAM13BQ9NYF5 915 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 ABCA3Q99758 1704 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 SLC27A2O14975 620 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 EVA1CP58658 441 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 KLHDC4Q8TBB5 520 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 TTC12Q9H892 705 aaPredicted RBP24.74■■□□□ 1.55
CPNE7-202ENST00000319518 SNRKQ9NRH2 765 aa24.74■■□□□ 1.55
CPNE7-202ENST00000319518 VPS37CA5D8V6 355 aaPredicted RBP24.73■■□□□ 1.55
CPNE7-202ENST00000319518 EPHA10Q5JZY3 1008 aa24.73■■□□□ 1.55
CPNE7-202ENST00000319518 SASS6Q6UVJ0 657 aa24.73■■□□□ 1.55
CPNE7-202ENST00000319518 KDM4AO75164 1064 aa24.73■■□□□ 1.55
CPNE7-202ENST00000319518 IL2RBP14784 551 aa24.73■■□□□ 1.55
CPNE7-202ENST00000319518 NEXNQ0ZGT2 675 aa24.73■■□□□ 1.55
CPNE7-202ENST00000319518 METTL22Q9BUU2 404 aaPredicted RBP24.73■■□□□ 1.55
CPNE7-202ENST00000319518 ATP5J2-PTCD1G3V325 749 aa24.72■■□□□ 1.55
CPNE7-202ENST00000319518 PTCD1O75127 700 aaKnown RBP24.72■■□□□ 1.55
CPNE7-202ENST00000319518 GCKRQ14397 625 aa24.72■■□□□ 1.55
CPNE7-202ENST00000319518 ZKSCAN1P17029 563 aaPredicted RBP24.72■■□□□ 1.55
CPNE7-202ENST00000319518 TCEANC2Q96MN5 208 aa24.72■■□□□ 1.55
CPNE7-202ENST00000319518 CARD10Q9BWT7 1032 aa24.72■■□□□ 1.55
CPNE7-202ENST00000319518 SIL1Q9H173 461 aa24.72■■□□□ 1.55
CPNE7-202ENST00000319518 GLI3P10071 1580 aa24.72■■□□□ 1.55
CPNE7-202ENST00000319518 PARP4Q9UKK3 1724 aaKnown RBP24.71■■□□□ 1.55
CPNE7-202ENST00000319518 CDC37L1Q7L3B6 337 aa24.71■■□□□ 1.55
CPNE7-202ENST00000319518 VSIG10Q8N0Z9 540 aa24.71■■□□□ 1.55
CPNE7-202ENST00000319518 C17orf53Q8N3J3 647 aaPredicted RBP24.71■■□□□ 1.55
CPNE7-202ENST00000319518 PIBF1Q8WXW3 757 aa24.71■■□□□ 1.55
CPNE7-202ENST00000319518 BOLA2Q9H3K6 86 aa24.71■■□□□ 1.55
CPNE7-202ENST00000319518 FAM173BQ6P4H8 233 aa24.7■■□□□ 1.54
CPNE7-202ENST00000319518 TTC6Q86TZ1 520 aa24.7■■□□□ 1.54
CPNE7-202ENST00000319518 NBPF26B4DH59 902 aa24.7■■□□□ 1.54
CPNE7-202ENST00000319518 G3BP1Q13283 466 aaKnown RBP eCLIP24.7■■□□□ 1.54
CPNE7-202ENST00000319518 NBPF14Q5TI25 921 aa24.7■■□□□ 1.54
CPNE7-202ENST00000319518 NBPF10Q6P3W6 841 aaKnown RBP24.7■■□□□ 1.54
CPNE7-202ENST00000319518 NBPF15Q8N660 670 aa24.7■■□□□ 1.54
CPNE7-202ENST00000319518 MED23Q9ULK4 1368 aa24.69■■□□□ 1.54
CPNE7-202ENST00000319518 ZNF589Q86UQ0 364 aaPredicted RBP24.69■■□□□ 1.54
CPNE7-202ENST00000319518 PLEKHG2Q9H7P9 1386 aa24.69■■□□□ 1.54
CPNE7-202ENST00000319518 DYNC1I1O14576 645 aa24.69■■□□□ 1.54
CPNE7-202ENST00000319518 KCNJ4P48050 445 aa24.69■■□□□ 1.54
CPNE7-202ENST00000319518 LARP1BQ659C4 914 aaKnown RBP24.69■■□□□ 1.54
CPNE7-202ENST00000319518 FERMT3Q86UX7 667 aa24.69■■□□□ 1.54
CPNE7-202ENST00000319518 A1BGP04217 495 aa24.67■■□□□ 1.54
CPNE7-202ENST00000319518 HDAC5Q9UQL6 1122 aa24.67■■□□□ 1.54
CPNE7-202ENST00000319518 HIP1O00291 1037 aa24.67■■□□□ 1.54
CPNE7-202ENST00000319518 TOB2Q14106 344 aaPredicted RBP24.67■■□□□ 1.54
CPNE7-202ENST00000319518 NOLC1Q14978 699 aaKnown RBP eCLIP24.67■■□□□ 1.546e-6■□□□□ 9.7
CPNE7-202ENST00000319518 EDC3Q96F86 508 aaKnown RBP24.67■■□□□ 1.54
CPNE7-202ENST00000319518 FSD1Q9BTV5 496 aa24.66■■□□□ 1.54
CPNE7-202ENST00000319518 JCADQ9P266 1359 aa24.66■■□□□ 1.54
CPNE7-202ENST00000319518 UBE3BQ7Z3V4 1068 aa24.66■■□□□ 1.54
CPNE7-202ENST00000319518 TTLL7Q6ZT98 887 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 BTG4Q9NY30 223 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 SHANK3Q9BYB0 1731 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 COL15A1P39059 1388 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 NHSL1Q5SYE7 1610 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 ERVV-2B6SEH9 535 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 LIG1P18858 919 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 RPS6KB1P23443 525 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 PSMA5P28066 241 aa24.65■■□□□ 1.54
CPNE7-202ENST00000319518 KLHL34Q8N239 644 aa24.64■■□□□ 1.54
CPNE7-202ENST00000319518 NKX1-1Q15270 411 aaPredicted RBP24.64■■□□□ 1.53
CPNE7-202ENST00000319518 BLOC1S2Q6QNY1 142 aa24.64■■□□□ 1.53
CPNE7-202ENST00000319518 PLCB2Q00722 1185 aa24.63■■□□□ 1.53
CPNE7-202ENST00000319518 KCNF1Q9H3M0 494 aa24.63■■□□□ 1.53
CPNE7-202ENST00000319518 KRT85P78386 507 aa24.63■■□□□ 1.53
CPNE7-202ENST00000319518 SPTLC3Q9NUV7 552 aa24.63■■□□□ 1.53
CPNE7-202ENST00000319518 CHMP3Q9Y3E7 222 aa24.63■■□□□ 1.53
CPNE7-202ENST00000319518 ARFGEF2Q9Y6D5 1785 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 ELP1O95163 1332 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 A0A087WZG4 1122 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 TAF5LO75529 589 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 CHGBP05060 677 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 MYRIPQ8NFW9 859 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 PLBD2Q8NHP8 589 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 ALDH8A1Q9H2A2 487 aaPredicted RBP24.62■■□□□ 1.53
CPNE7-202ENST00000319518 KCPQ6ZWJ8 1503 aa24.62■■□□□ 1.53
CPNE7-202ENST00000319518 AFDNP55196 1824 aaKnown RBP24.61■■□□□ 1.53
CPNE7-202ENST00000319518 LAMB4A4D0S4 1761 aa24.61■■□□□ 1.53
CPNE7-202ENST00000319518 CAMK4Q16566 473 aa24.61■■□□□ 1.53
CPNE7-202ENST00000319518 ZMYND15Q9H091 742 aa24.61■■□□□ 1.53
CPNE7-202ENST00000319518 CCDC192P0DO97 292 aa24.6■■□□□ 1.53
CPNE7-202ENST00000319518 TSGA10IPQ3SY00 556 aa24.6■■□□□ 1.53
CPNE7-202ENST00000319518 DNTTIP2Q5QJE6 756 aaKnown RBP24.6■■□□□ 1.53
CPNE7-202ENST00000319518 ZBTB3Q9H5J0 574 aa24.6■■□□□ 1.53
CPNE7-202ENST00000319518 NDUFB9Q9Y6M9 179 aa24.6■■□□□ 1.53
CPNE7-202ENST00000319518 STK3Q13188 491 aa24.6■■□□□ 1.53
CPNE7-202ENST00000319518 RNF20Q5VTR2 975 aa24.6■■□□□ 1.53
CPNE7-202ENST00000319518 DBNLQ9UJU6 430 aaKnown RBP24.6■■□□□ 1.53
CPNE7-202ENST00000319518 MRVI1Q9Y6F6 885 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms