RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 MBD3O95983 291 aa8.5□□□□□ -1.05
CCDC93-201ENST00000319432 CCDC47Q96A33 483 aaKnown RBP8.5□□□□□ -1.05
CCDC93-201ENST00000319432 VEZTQ9HBM0 779 aa8.5□□□□□ -1.05
CCDC93-201ENST00000319432 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC93-201ENST00000319432 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
CCDC93-201ENST00000319432 BCCIPQ9P287 314 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC93-201ENST00000319432 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
CCDC93-201ENST00000319432 FSD1Q9BTV5 496 aa8.5□□□□□ -1.05
CCDC93-201ENST00000319432 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
CCDC93-201ENST00000319432 NYXQ9GZU5 481 aa8.5□□□□□ -1.05
CCDC93-201ENST00000319432 DDX21Q9NR30 783 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC93-201ENST00000319432 USP8P40818 1118 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 LMAN1P49257 510 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 SMARCE1Q969G3 411 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 SPATA31A1Q5TZJ5 1347 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 LMOD1P29536 600 aaPredicted RBP8.49□□□□□ -1.05
CCDC93-201ENST00000319432 CCDC8Q9H0W5 538 aaPredicted RBP8.49□□□□□ -1.05
CCDC93-201ENST00000319432 RNF20Q5VTR2 975 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 DPY19L2Q6NUT2 758 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 AACSQ86V21 672 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 SERPINB2P05120 415 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 LRRFIP1Q32MZ4 808 aaKnown RBP8.49□□□□□ -1.05
CCDC93-201ENST00000319432 TMEM57Q8N5G2 664 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 CCP110O43303 1012 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 ATP2C2O75185 946 aa8.49□□□□□ -1.05
CCDC93-201ENST00000319432 DZIP1Q86YF9 867 aaKnown RBP8.48□□□□□ -1.05
CCDC93-201ENST00000319432 PANK2Q9BZ23 570 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 CFAP45Q9UL16 551 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 CCDC113Q9H0I3 377 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 CASQ1P31415 396 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 SEPT7Q16181 437 aaKnown RBP8.48□□□□□ -1.05
CCDC93-201ENST00000319432 UBXN4Q92575 508 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 TIGD1Q96MW7 591 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 TCEAL9Q9UHQ7 104 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 ERLIN1O75477 346 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 DPP8Q6V1X1 898 aaPredicted RBP8.48□□□□□ -1.05
CCDC93-201ENST00000319432 RNF17Q9BXT8 1623 aaKnown RBP8.48□□□□□ -1.05
CCDC93-201ENST00000319432 KSR2Q6VAB6 950 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 G2E3Q7L622 706 aa8.48□□□□□ -1.05
CCDC93-201ENST00000319432 PPIP5K2O43314 1243 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 DNA2P51530 1060 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 ADGRB3O60242 1522 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 GOLGA6L7A0A1B0GV03 622 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 URI1O94763 535 aaPredicted RBP8.47□□□□□ -1.05
CCDC93-201ENST00000319432 ME1P48163 572 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 TRDNQ13061 729 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 CPLX2Q6PUV4 134 aaKnown RBP8.47□□□□□ -1.05
CCDC93-201ENST00000319432 PPFIBP1Q86W92 1011 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 USP25Q9UHP3 1055 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 CEP152O94986 1710 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 SHTN1A0MZ66 631 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 PTPN14Q15678 1187 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 SPATA31A5Q5VU36 1347 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 SPATA31A7Q8IWB4 1347 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 ADGBQ8N7X0 1667 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 SLFN5Q08AF3 891 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 FILIP1LQ4L180 1135 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 CRACR2BQ8N4Y2 399 aaPredicted RBP8.47□□□□□ -1.05
CCDC93-201ENST00000319432 LARP6Q9BRS8 491 aaKnown RBP8.47□□□□□ -1.05
CCDC93-201ENST00000319432 MAGEC2Q9UBF1 373 aaPredicted RBP8.47□□□□□ -1.05
CCDC93-201ENST00000319432 ALKQ9UM73 1620 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 UFL1O94874 794 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 MNAT1P51948 309 aa8.47□□□□□ -1.05
CCDC93-201ENST00000319432 EIF6P56537 245 aaKnown RBP8.47□□□□□ -1.05
CCDC93-201ENST00000319432 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.059e-7■■□□□ 14.2
CCDC93-201ENST00000319432 ZRSR2Q15696 482 aaKnown RBP8.46□□□□□ -1.05
CCDC93-201ENST00000319432 ERICH2A1L162 156 aa8.46□□□□□ -1.05
CCDC93-201ENST00000319432 SBNO2Q9Y2G9 1366 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 WDHD1O75717 1129 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-201ENST00000319432 BOLA2Q9H3K6 86 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCDC93-201ENST00000319432 V9GYY5 206 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-201ENST00000319432 SSFA2P28290 1259 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 SAFBQ15424 915 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCDC93-201ENST00000319432 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 C21orf2O43822 256 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 ZSWIM4Q9H7M6 989 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 MYO6Q9UM54 1294 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 ANKARQ7Z5J8 1434 aa8.46□□□□□ -1.06
CCDC93-201ENST00000319432 ERC2O15083 957 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-201ENST00000319432 FAM107BQ9H098 131 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 A0A0G2JLW4 131 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 LINS1Q8NG48 757 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 GDPD2Q9HCC8 539 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 GRM8O00222 908 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 MAP2K1Q02750 393 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-201ENST00000319432 STK38Q15208 465 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 INCENPQ9NQS7 918 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 FER1L4A9Z1Z3 1794 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 ARHGEF1Q92888 912 aaKnown RBP8.45□□□□□ -1.06
CCDC93-201ENST00000319432 PLXNC1O60486 1568 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 LIG1P18858 919 aa8.45□□□□□ -1.06
CCDC93-201ENST00000319432 TANGO6Q9C0B7 1094 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms