RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 PROM2Q8N271 834 aa15.47■□□□□ 0.07
PTPN6-201ENST00000318974 SNX21Q969T3 373 aa15.47■□□□□ 0.07
PTPN6-201ENST00000318974 FAM177BA6PVY3 158 aa15.46■□□□□ 0.07
PTPN6-201ENST00000318974 PHF14O94880 888 aa15.46■□□□□ 0.07
PTPN6-201ENST00000318974 NTSR2O95665 410 aa15.46■□□□□ 0.07
PTPN6-201ENST00000318974 MX1P20591 662 aa15.46■□□□□ 0.07
PTPN6-201ENST00000318974 RFC4P35249 363 aa15.46■□□□□ 0.07
PTPN6-201ENST00000318974 CTSWP56202 376 aa15.46■□□□□ 0.07
PTPN6-201ENST00000318974 CCDC57Q2TAC2 916 aa15.46■□□□□ 0.07
PTPN6-201ENST00000318974 GSPT1P15170 499 aaKnown RBP15.45■□□□□ 0.06
PTPN6-201ENST00000318974 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
PTPN6-201ENST00000318974 SCN7AQ01118 1682 aa15.45■□□□□ 0.06
PTPN6-201ENST00000318974 USP42Q9H9J4 1324 aaKnown RBP15.45■□□□□ 0.06
PTPN6-201ENST00000318974 HSP90B1P14625 803 aaKnown RBP15.45■□□□□ 0.06
PTPN6-201ENST00000318974 TBC1D9BQ66K14 1250 aa15.45■□□□□ 0.06
PTPN6-201ENST00000318974 NUTM1Q86Y26 1132 aa15.45■□□□□ 0.06
PTPN6-201ENST00000318974 TTLL11Q8NHH1 800 aa15.45■□□□□ 0.06
PTPN6-201ENST00000318974 AOX1Q06278 1338 aa15.44■□□□□ 0.06
PTPN6-201ENST00000318974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
PTPN6-201ENST00000318974 SSFA2P28290 1259 aa15.44■□□□□ 0.06
PTPN6-201ENST00000318974 IFIT5Q13325 482 aaKnown RBP15.44■□□□□ 0.06
PTPN6-201ENST00000318974 BICDL1Q6ZP65 573 aa15.44■□□□□ 0.06
PTPN6-201ENST00000318974 CCDC85AQ96PX6 553 aaPredicted RBP15.43■□□□□ 0.06
PTPN6-201ENST00000318974 IFIT2P09913 472 aaKnown RBP15.43■□□□□ 0.06
PTPN6-201ENST00000318974 ZNF594Q96JF6 807 aaPredicted RBP15.43■□□□□ 0.06
PTPN6-201ENST00000318974 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
PTPN6-201ENST00000318974 CHMP5Q9NZZ3 219 aa15.43■□□□□ 0.06
PTPN6-201ENST00000318974 FBXO3Q9UK99 471 aa15.43■□□□□ 0.06
PTPN6-201ENST00000318974 EYA2O00167 538 aa15.42■□□□□ 0.06
PTPN6-201ENST00000318974 CIAO1O76071 339 aa15.42■□□□□ 0.06
PTPN6-201ENST00000318974 HCLS1P14317 486 aaPredicted RBP15.42■□□□□ 0.06
PTPN6-201ENST00000318974 IL15P40933 162 aaPredicted RBP15.42■□□□□ 0.06
PTPN6-201ENST00000318974 TAF7LQ5H9L4 462 aa15.42■□□□□ 0.06
PTPN6-201ENST00000318974 AACSQ86V21 672 aa15.42■□□□□ 0.06
PTPN6-201ENST00000318974 GREM2Q9H772 168 aa15.42■□□□□ 0.06
PTPN6-201ENST00000318974 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 ITGA6P23229 1130 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 TFCP2Q12800 502 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 TSHZ3Q63HK5 1081 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 NYXQ9GZU5 481 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
PTPN6-201ENST00000318974 ATG9AQ7Z3C6 839 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 EAF2Q96CJ1 260 aaPredicted RBP15.41■□□□□ 0.06
PTPN6-201ENST00000318974 KIF2CQ99661 725 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 TTC41PQ6P2S7 1318 aa15.41■□□□□ 0.06
PTPN6-201ENST00000318974 SDSP20132 328 aa15.4■□□□□ 0.06
PTPN6-201ENST00000318974 LRRC24Q50LG9 513 aa15.4■□□□□ 0.06
PTPN6-201ENST00000318974 GPATCH3Q96I76 525 aa15.4■□□□□ 0.06
PTPN6-201ENST00000318974 GTF2E1P29083 439 aaPredicted RBP15.4■□□□□ 0.06
PTPN6-201ENST00000318974 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
PTPN6-201ENST00000318974 C4AP0C0L4 1744 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 CCDC152Q4G0S7 254 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
PTPN6-201ENST00000318974 PI4K2BQ8TCG2 481 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 PUS3Q9BZE2 481 aaKnown RBP15.39■□□□□ 0.05
PTPN6-201ENST00000318974 CCDC8Q9H0W5 538 aaPredicted RBP15.39■□□□□ 0.05
PTPN6-201ENST00000318974 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 TNS1Q9HBL0 1735 aaKnown RBP15.39■□□□□ 0.05
PTPN6-201ENST00000318974 ERC2O15083 957 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 GPR108Q9NPR9 543 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 ECHDC1Q9NTX5 307 aa15.39■□□□□ 0.05
PTPN6-201ENST00000318974 ZNF827Q17R98 1081 aa15.38■□□□□ 0.05
PTPN6-201ENST00000318974 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
PTPN6-201ENST00000318974 CASC1Q6TDU7 716 aa15.38■□□□□ 0.05
PTPN6-201ENST00000318974 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
PTPN6-201ENST00000318974 SPRYD3Q8NCJ5 442 aa15.38■□□□□ 0.05
PTPN6-201ENST00000318974 TFCP2L1Q9NZI6 479 aa15.38■□□□□ 0.05
PTPN6-201ENST00000318974 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
PTPN6-201ENST00000318974 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
PTPN6-201ENST00000318974 GYS1P13807 737 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 LDHAL6AQ6ZMR3 332 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 CEP126Q9P2H0 1117 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 TRIM6-TRIM34B2RNG4 842 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 DDIT3P35638 169 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 NFIXQ14938 502 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 CARMIL3Q8ND23 1372 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 TUBGCP6Q96RT7 1819 aa15.37■□□□□ 0.05
PTPN6-201ENST00000318974 CNNM1Q9NRU3 951 aa15.36■□□□□ 0.05
PTPN6-201ENST00000318974 TLR7Q9NYK1 1049 aaKnown RBP15.36■□□□□ 0.05
PTPN6-201ENST00000318974 CIZ1Q9ULV3 898 aaPredicted RBP15.36■□□□□ 0.05
PTPN6-201ENST00000318974 COL24A1Q17RW2 1714 aa15.36■□□□□ 0.05
PTPN6-201ENST00000318974 SF3B3Q15393 1217 aaKnown RBP15.36■□□□□ 0.05
PTPN6-201ENST00000318974 RIPOR2Q9Y4F9 1068 aa15.36■□□□□ 0.05
PTPN6-201ENST00000318974 DDX60Q8IY21 1712 aaKnown RBP15.35■□□□□ 0.05
PTPN6-201ENST00000318974 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
PTPN6-201ENST00000318974 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 FLAD1Q8NFF5 587 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 RILPL2Q969X0 211 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 ABCC12Q96J65 1359 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 LAMB2P55268 1798 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 NPHP1O15259 732 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 MCM4P33991 863 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 CAMKK2Q96RR4 588 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 SEC31BQ9NQW1 1179 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 DBNLQ9UJU6 430 aaKnown RBP15.35■□□□□ 0.05
PTPN6-201ENST00000318974 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
PTPN6-201ENST00000318974 MYH3P11055 1940 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms