RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CDC37L1Q7L3B6 337 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 ZNF710Q8N1W2 664 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 CCDC82Q8N4S0 544 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 CAGE1Q8TC20 777 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 BRF1Q92994 677 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 ANO10Q9NW15 660 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 CFAP45Q9UL16 551 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 KARSQ15046 597 aaKnown RBP8.78□□□□□ -1
CDHR3-201ENST00000317716 LARP1Q6PKG0 1096 aaKnown RBP8.78□□□□□ -1
CDHR3-201ENST00000317716 KIAA1524Q8TCG1 905 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 ARHGAP45Q92619 1136 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 KIF1BPQ96EK5 621 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 CCDC85AQ96PX6 553 aaPredicted RBP8.78□□□□□ -1
CDHR3-201ENST00000317716 RBM8AQ9Y5S9 174 aaKnown RBP8.78□□□□□ -1
CDHR3-201ENST00000317716 IL16Q14005 1332 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 MAP3K19Q56UN5 1328 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 MYL6BP14649 208 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 ZNF75DP51815 510 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 ZSCAN25Q6NSZ9 544 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 IFNKQ9P0W0 207 aa8.78□□□□□ -1
CDHR3-201ENST00000317716 ANKRD65E5RJM6 399 aa8.77□□□□□ -1
CDHR3-201ENST00000317716 GLRX3O76003 335 aaKnown RBP8.77□□□□□ -1
CDHR3-201ENST00000317716 SETQ01105 290 aaPredicted RBP8.77□□□□□ -1
CDHR3-201ENST00000317716 AKAP17AQ02040 695 aaKnown RBP8.77□□□□□ -1
CDHR3-201ENST00000317716 MPRIPQ6WCQ1 1025 aa8.77□□□□□ -1
CDHR3-201ENST00000317716 ZNF396Q96N95 335 aaPredicted RBP8.77□□□□□ -1
CDHR3-201ENST00000317716 TPM1P09493 284 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 IRX3P78415 501 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 NCBP1Q09161 790 aaKnown RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 TRIM29Q14134 588 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 UTP14CQ5TAP6 766 aaKnown RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 RALYLQ86SE5 291 aaKnown RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 ANKRD24Q8TF21 1146 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 SNX14Q9Y5W7 946 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 NDUFB9Q9Y6M9 179 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 ANKRD36BQ8N2N9 1353 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 TRPM1Q7Z4N2 1603 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 GTF2A1P52655 376 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 NEXNQ0ZGT2 675 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 KIF4BQ2VIQ3 1234 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 ZNF530Q6P9A1 599 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 CACTINQ8WUQ7 758 aaKnown RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 INTS4Q96HW7 963 aaKnown RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 CARD6Q9BX69 1037 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 DEF6Q9H4E7 631 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 PUF60Q9UHX1 559 aaKnown RBP8.77□□□□□ -1.01
CDHR3-201ENST00000317716 IQGAP1P46940 1657 aa8.77□□□□□ -1.01
CDHR3-201ENST00000317716 TOP1P11387 765 aaKnown RBP8.76□□□□□ -1.01
CDHR3-201ENST00000317716 STX1AQ16623 288 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 TTC6Q86TZ1 520 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 RASEFQ8IZ41 740 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 SH2B1Q9NRF2 756 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-201ENST00000317716 PPLO60437 1756 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
CDHR3-201ENST00000317716 HAND2P61296 217 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 TSR1Q2NL82 804 aaKnown RBP8.76□□□□□ -1.01
CDHR3-201ENST00000317716 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-201ENST00000317716 ADGRL3Q9HAR2 1447 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 JAK2O60674 1132 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 CAPN2P17655 700 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 CASQ1P31415 396 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 GYS2P54840 703 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 VPS18Q9P253 973 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 CCDC171Q6TFL3 1326 aa8.76□□□□□ -1.01
CDHR3-201ENST00000317716 A0A1B0GVL5 298 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 PI4KAP2A4QPH2 592 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 NR1I2O75469 434 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 SEC31AO94979 1220 aaKnown RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 LARGE1O95461 756 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 MARCKSP29966 332 aaPredicted RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 PIP4K2AP48426 406 aaPredicted RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 DNA2P51530 1060 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 NAP1L1P55209 391 aaKnown RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 ANKRD1Q15327 319 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 RRP12Q5JTH9 1297 aaKnown RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 CCDC144CPQ8IYA2 1237 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 PI4KAP1Q8N8J0 262 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 PLEKHG3A1L390 1219 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 FAM98CQ17RN3 349 aaKnown RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 FKBP15Q5T1M5 1219 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 JAKMIP3Q5VZ66 844 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 UTP14AQ9BVJ6 771 aaKnown RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 SLC3A2P08195 630 aaKnown RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 GABPB1Q06547 395 aaPredicted RBP8.75□□□□□ -1.01
CDHR3-201ENST00000317716 GOLGA8FQ08AF8 430 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 GOLGA8DPQ0D2H9 430 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 KCNH5Q8NCM2 988 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 RUFY1Q96T51 708 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 RAI14Q9P0K7 980 aa8.75□□□□□ -1.01
CDHR3-201ENST00000317716 RHOXF2BP0C7M4 288 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 EVCP57679 992 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 ANAPC15P60006 121 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 FKBP4Q02790 459 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 CPLX2Q6PUV4 134 aaKnown RBP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 RUFY3Q7L099 469 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 RHOXF2Q9BQY4 288 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms