RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 IL13P35225 146 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 IL15P40933 162 aaPredicted RBP15.91■□□□□ 0.14
SPAST-201ENST00000315285 OTUD7AQ8TE49 926 aaPredicted RBP15.91■□□□□ 0.14
SPAST-201ENST00000315285 NUP88Q99567 741 aaPredicted RBP15.91■□□□□ 0.14
SPAST-201ENST00000315285 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
SPAST-201ENST00000315285 UQCRFS1P1P0C7P4 283 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 G2E3Q7L622 706 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 PRDM10Q9NQV6 1147 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 GCC2Q8IWJ2 1684 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 SYKP43405 635 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 TMEM132AQ24JP5 1023 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 CCDC150Q8NCX0 1101 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 KCNG4Q8TDN1 519 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 SEPT11Q9NVA2 429 aaKnown RBP15.91■□□□□ 0.14
SPAST-201ENST00000315285 CRACR2AQ9BSW2 395 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 KIAA0754O94854 1291 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 CREB3L3Q68CJ9 461 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 CCDC186Q7Z3E2 898 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
SPAST-201ENST00000315285 MAGI3Q5TCQ9 1506 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 ABCC2Q92887 1545 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 ATP2B3Q16720 1220 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 CDC5LQ99459 802 aaKnown RBP15.9■□□□□ 0.14
SPAST-201ENST00000315285 PTPRTO14522 1441 aa15.9■□□□□ 0.14
SPAST-201ENST00000315285 CEP135Q66GS9 1140 aa15.89■□□□□ 0.14
SPAST-201ENST00000315285 KANK3Q6NY19 840 aa15.89■□□□□ 0.14
SPAST-201ENST00000315285 RAB34Q9BZG1 259 aa15.89■□□□□ 0.14
SPAST-201ENST00000315285 MPHOSPH10O00566 681 aaKnown RBP15.89■□□□□ 0.13
SPAST-201ENST00000315285 YEATS4O95619 227 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 PAXBP1Q9Y5B6 917 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 ZBTB43O43298 467 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 JAKMIP3Q5VZ66 844 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 CCDC191Q8NCU4 936 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 ALG1Q9BT22 464 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 DNAJC25Q9H1X3 360 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
SPAST-201ENST00000315285 GOLGA6L9A6NEM1 432 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 CACNA2D4Q7Z3S7 1137 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
SPAST-201ENST00000315285 HS1BP3Q53T59 392 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 PAG1Q9NWQ8 432 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 TSG101Q99816 390 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 CCDC171Q6TFL3 1326 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 KIF5BP33176 963 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 PPP4R3BQ5MIZ7 849 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 ABCA5Q8WWZ7 1642 aa15.88■□□□□ 0.13
SPAST-201ENST00000315285 HOXC9P31274 260 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 TYRO3Q06418 890 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 ZCRB1Q8TBF4 217 aaKnown RBP15.87■□□□□ 0.13
SPAST-201ENST00000315285 TMX1Q9H3N1 280 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 CHL1O00533 1208 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 SKILP12757 684 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 WTAPQ15007 396 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 RAD50Q92878 1312 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 EDC4Q6P2E9 1401 aaKnown RBP15.87■□□□□ 0.13
SPAST-201ENST00000315285 SYT1P21579 422 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 MAP9Q49MG5 647 aa15.87■□□□□ 0.13
SPAST-201ENST00000315285 PPP1R12BO60237 982 aaPredicted RBP15.86■□□□□ 0.13
SPAST-201ENST00000315285 FGFR1OPO95684 399 aaKnown RBP15.86■□□□□ 0.13
SPAST-201ENST00000315285 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 TSPY2A6NKD2 308 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 ADAMTS2O95450 1211 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 UBASH3AP57075 661 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 PIP4K2BP78356 416 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 ATP7AQ04656 1500 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 CRACR2BQ8N4Y2 399 aaPredicted RBP15.86■□□□□ 0.13
SPAST-201ENST00000315285 PYM1Q9BRP8 204 aaKnown RBP15.86■□□□□ 0.13
SPAST-201ENST00000315285 KRT23Q9C075 422 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 TRPM2O94759 1503 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 PDE4BQ07343 736 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 TCP11L1Q9NUJ3 509 aa15.86■□□□□ 0.13
SPAST-201ENST00000315285 UBA7P41226 1012 aa15.85■□□□□ 0.13
SPAST-201ENST00000315285 PRC1O43663 620 aa15.85■□□□□ 0.13
SPAST-201ENST00000315285 PRKCSHP14314 528 aaPredicted RBP15.85■□□□□ 0.13
SPAST-201ENST00000315285 SLC9C2Q5TAH2 1124 aa15.85■□□□□ 0.13
SPAST-201ENST00000315285 AOPEPQ8N6M6 819 aa15.85■□□□□ 0.13
SPAST-201ENST00000315285 USO1O60763 962 aaKnown RBP15.85■□□□□ 0.13
SPAST-201ENST00000315285 MTIF2P46199 727 aaKnown RBP15.85■□□□□ 0.13
SPAST-201ENST00000315285 GNG11P61952 73 aa15.85■□□□□ 0.13
SPAST-201ENST00000315285 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
SPAST-201ENST00000315285 MCM3P25205 808 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 BICC1Q9H694 974 aaKnown RBP15.84■□□□□ 0.13
SPAST-201ENST00000315285 CNNM2Q9H8M5 875 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 CPA1P15085 419 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 MARCKSP29966 332 aaPredicted RBP15.84■□□□□ 0.13
SPAST-201ENST00000315285 TFCP2Q12800 502 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 CCDC96Q2M329 555 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 TMTC2Q8N394 836 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 CCDC12Q8WUD4 166 aaPredicted RBP15.84■□□□□ 0.13
SPAST-201ENST00000315285 KAT14Q9H8E8 782 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 TMOD2Q9NZR1 351 aa15.84■□□□□ 0.13
SPAST-201ENST00000315285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.84■□□□□ 0.136e-6■■■■■ 48.1
SPAST-201ENST00000315285 RTN1Q16799 776 aa15.83■□□□□ 0.13
SPAST-201ENST00000315285 DHX32Q7L7V1 743 aaKnown RBP15.83■□□□□ 0.13
SPAST-201ENST00000315285 SPTLC2O15270 562 aa15.83■□□□□ 0.13
SPAST-201ENST00000315285 POLR3GO15318 223 aaPredicted RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms