RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NCOA7Q8NI08 942 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 PCMTD1Q96MG8 357 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 C8orf37Q96NL8 207 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 UBAP1LF5GYI3 381 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 SYT1P21579 422 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 IBTKQ9P2D0 1353 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 PDIA4P13667 645 aaKnown RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 ATP2B2Q01814 1243 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 RANBP6O60518 1105 aaKnown RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 TTF1Q15361 905 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 CCDC47Q96A33 483 aaKnown RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 KLHL34Q8N239 644 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 SEC62Q99442 399 aaKnown RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 SLC12A7Q9Y666 1083 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 ARHGEF40Q8TER5 1519 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 ITGA6P23229 1130 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 IARSP41252 1262 aaKnown RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 HCLS1P14317 486 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 HSP90AA2PQ14568 343 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 RAD50Q92878 1312 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 STAP2Q9UGK3 403 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 SLC27A2O14975 620 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 PTH1RQ03431 593 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 TLR7Q9NYK1 1049 aaKnown RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 TPM3P06753 285 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 IKQ13123 557 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 CCDC152Q4G0S7 254 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 TMEM67Q5HYA8 995 aa7.25□□□□□ -1.25
PRKDC-201ENST00000314191 CCAR2Q8N163 923 aaKnown RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 ANO8Q9HCE9 1232 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-201ENST00000314191 CDC5LQ99459 802 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 MIGA1Q8NAN2 632 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 INTS4Q96HW7 963 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 LRSAM1Q6UWE0 723 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 RNF17Q9BXT8 1623 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 UBE2HP62256 183 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 ANKIB1Q9P2G1 1089 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 CPSF1Q10570 1443 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 CYP7A1P22680 504 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 XAGE2Q96GT9 111 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 TSR1Q2NL82 804 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 DDX19AQ9NUU7 478 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 ZNF219Q9P2Y4 722 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 TET3O43151 1660 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 PRC1O43663 620 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 ZAP70P43403 619 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 LRRC24Q50LG9 513 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 CEP57L1Q8IYX8 460 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 DACT1Q9NYF0 836 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 RBM10P98175 930 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 ANKRD18AQ8IVF6 992 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 UTP14AQ9BVJ6 771 aaKnown RBP7.24□□□□□ -1.25
PRKDC-201ENST00000314191 SERPINC1P01008 464 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 METAP2P50579 478 aaKnown RBP eCLIP7.24□□□□□ -1.253e-6■■■□□ 17.3
PRKDC-201ENST00000314191 PTPDC1A2A3K4 754 aa7.24□□□□□ -1.25
PRKDC-201ENST00000314191 TPM1P09493 284 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 PKP1Q13835 747 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ISM2Q6H9L7 571 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 RASEFQ8IZ41 740 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 CDK12Q9NYV4 1490 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-201ENST00000314191 CDC42BPAQ5VT25 1732 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 TAF5LO75529 589 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 SLC4A4Q9Y6R1 1079 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ALKQ9UM73 1620 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ASAP1Q9ULH1 1129 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 KDRP35968 1356 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ZFYP08048 801 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-201ENST00000314191 CCDC24Q8N4L8 307 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 FSIP1Q8NA03 581 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 PUS3Q9BZE2 481 aaKnown RBP7.23□□□□□ -1.25
PRKDC-201ENST00000314191 OSBPL3Q9H4L5 887 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 TOM1O60784 492 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 KBTBD3Q8NAB2 608 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ANKRD20A12PQ8NF67 263 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ABCA9Q8IUA7 1624 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 HSPA4P34932 840 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ATP5JP18859 108 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 MKNK2Q9HBH9 465 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 BIN1O00499 593 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 SSRP1Q08945 709 aaKnown RBP7.23□□□□□ -1.25
PRKDC-201ENST00000314191 IQCA1Q86XH1 822 aa7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ZNF335Q9H4Z2 1342 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-201ENST00000314191 RBM5P52756 815 aaKnown RBP eCLIP7.23□□□□□ -1.25
PRKDC-201ENST00000314191 ZSCAN29Q8IWY8 852 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-201ENST00000314191 PTPRMP28827 1452 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 DZIP1Q86YF9 867 aaKnown RBP7.22□□□□□ -1.25
PRKDC-201ENST00000314191 RXRAP19793 462 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 MCM5P33992 734 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 USP5P45974 858 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 NBPF5PQ86XG9 351 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-201ENST00000314191 HELLSQ9NRZ9 838 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 A0A0D9SFI3 127 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 CYP27B1O15528 508 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 WASF1Q92558 559 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 RNF41Q9H4P4 317 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-201ENST00000314191 SASH1O94885 1247 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 AK7Q96M32 723 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 SLC26A6Q9BXS9 759 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 AOX1Q06278 1338 aa7.22□□□□□ -1.25
PRKDC-201ENST00000314191 ERVV-2B6SEH9 535 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms