RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 MEIS3Q99687 375 aa9.44□□□□□ -0.9
GFM1-202ENST00000312756 HYPKQ9NX55 129 aa9.44□□□□□ -0.9
GFM1-202ENST00000312756 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
GFM1-202ENST00000312756 INTS3Q68E01 1043 aaKnown RBP9.44□□□□□ -0.9
GFM1-202ENST00000312756 LINC00116Q8NCU8 138 aa9.44□□□□□ -0.9
GFM1-202ENST00000312756 ARFGEF2Q9Y6D5 1785 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 COL5A3P25940 1745 aaPredicted RBP9.43□□□□□ -0.9
GFM1-202ENST00000312756 IGHDP01880 384 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 CRKLP46109 303 aaKnown RBP9.43□□□□□ -0.9
GFM1-202ENST00000312756 INTS5Q6P9B9 1019 aaKnown RBP9.43□□□□□ -0.9
GFM1-202ENST00000312756 AMIGO3Q86WK7 504 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 DNAAF4Q8WXU2 420 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 LY75O60449 1722 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
GFM1-202ENST00000312756 LRRC4BQ9NT99 713 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 ZBTB40Q9NUA8 1239 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 DDX19BQ9UMR2 479 aa9.43□□□□□ -0.9
GFM1-202ENST00000312756 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
GFM1-202ENST00000312756 ATP5J2-PTCD1G3V325 749 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 STARD3NLO95772 234 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 MS4A1P11836 297 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 MCM6Q14566 821 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 KSR2Q6VAB6 950 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 ANKRD13DQ6ZTN6 518 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 RIC3Q7Z5B4 369 aa9.42□□□□□ -0.9
GFM1-202ENST00000312756 TAF1LQ8IZX4 1826 aa9.41□□□□□ -0.9
GFM1-202ENST00000312756 IGKV5-2P06315 115 aa9.41□□□□□ -0.9
GFM1-202ENST00000312756 NBPF9Q3BBW0 867 aa9.41□□□□□ -0.9
GFM1-202ENST00000312756 SMARCC1Q92922 1105 aaPredicted RBP9.41□□□□□ -0.9
GFM1-202ENST00000312756 MYD88Q99836 296 aa9.41□□□□□ -0.9
GFM1-202ENST00000312756 CCNL1Q9UK58 526 aaPredicted RBP9.41□□□□□ -0.9
GFM1-202ENST00000312756 TBC1D2BQ9UPU7 963 aa9.41□□□□□ -0.9
GFM1-202ENST00000312756 AFDNP55196 1824 aaKnown RBP9.41□□□□□ -0.9
GFM1-202ENST00000312756 HLFQ16534 295 aa9.41□□□□□ -0.9
GFM1-202ENST00000312756 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
GFM1-202ENST00000312756 TNS1Q9HBL0 1735 aaKnown RBP9.41□□□□□ -0.9
GFM1-202ENST00000312756 SPDYE2BA6NHP3 402 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 NBPF7P0C2Y1 421 aaPredicted RBP9.4□□□□□ -0.9
GFM1-202ENST00000312756 SPDYE6P0CI01 402 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 CCT4P50991 539 aaKnown RBP9.4□□□□□ -0.9
GFM1-202ENST00000312756 SPDYE2Q495Y8 402 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 CASC1Q6TDU7 716 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
GFM1-202ENST00000312756 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 USP44Q9H0E7 712 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 CCDC87Q9NVE4 849 aa9.4□□□□□ -0.9
GFM1-202ENST00000312756 ERBB4Q15303 1308 aa9.4□□□□□ -0.91
GFM1-202ENST00000312756 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.91
GFM1-202ENST00000312756 DDX58O95786 925 aaKnown RBP9.39□□□□□ -0.91
GFM1-202ENST00000312756 SIRT2Q8IXJ6 389 aa9.39□□□□□ -0.91
GFM1-202ENST00000312756 FAM177A1Q8N128 213 aaPredicted RBP9.39□□□□□ -0.91
GFM1-202ENST00000312756 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
GFM1-202ENST00000312756 RREB1Q92766 1687 aa9.39□□□□□ -0.91
GFM1-202ENST00000312756 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
GFM1-202ENST00000312756 APBA3O96018 575 aa9.39□□□□□ -0.91
GFM1-202ENST00000312756 ZSCAN20P17040 1043 aaPredicted RBP9.39□□□□□ -0.91
GFM1-202ENST00000312756 PLBD2Q8NHP8 589 aa9.39□□□□□ -0.91
GFM1-202ENST00000312756 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
GFM1-202ENST00000312756 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 ZNF831Q5JPB2 1677 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 NUP98P52948 1817 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 NEURL1BA8MQ27 555 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 EIF5P55010 431 aaKnown RBP9.38□□□□□ -0.91
GFM1-202ENST00000312756 SF3B2Q13435 895 aaKnown RBP9.38□□□□□ -0.91
GFM1-202ENST00000312756 DEFB132Q7Z7B7 95 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 TMTC2Q8N394 836 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
GFM1-202ENST00000312756 ATP10DQ9P241 1426 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 C4BP0C0L5 1744 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 GPTP24298 496 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 IL6STP40189 918 aaPredicted RBP9.38□□□□□ -0.91
GFM1-202ENST00000312756 L1TD1Q5T7N2 865 aaKnown RBP9.38□□□□□ -0.91
GFM1-202ENST00000312756 DZIP3Q86Y13 1208 aaKnown RBP9.38□□□□□ -0.91
GFM1-202ENST00000312756 OTUD6BQ8N6M0 293 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 RAI14Q9P0K7 980 aa9.38□□□□□ -0.91
GFM1-202ENST00000312756 GNPATO15228 680 aa9.37□□□□□ -0.91
GFM1-202ENST00000312756 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
GFM1-202ENST00000312756 SEMA3FQ13275 785 aa9.37□□□□□ -0.91
GFM1-202ENST00000312756 TXNRD1Q16881 649 aa9.37□□□□□ -0.91
GFM1-202ENST00000312756 SYNE4Q8N205 404 aa9.37□□□□□ -0.91
GFM1-202ENST00000312756 LINS1Q8NG48 757 aa9.37□□□□□ -0.91
GFM1-202ENST00000312756 MAP3K15Q6ZN16 1313 aa9.37□□□□□ -0.91
GFM1-202ENST00000312756 COL15A1P39059 1388 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 IRF6O14896 467 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 GCKRQ14397 625 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 CEP85Q6P2H3 762 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 KIF6Q6ZMV9 814 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 BSDC1Q9NW68 430 aaPredicted RBP9.36□□□□□ -0.91
GFM1-202ENST00000312756 SRP68Q9UHB9 627 aaKnown RBP9.36□□□□□ -0.91
GFM1-202ENST00000312756 PNMA6EA0A0J9YXQ4 647 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 FAM177BA6PVY3 158 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 UBTFL1P0CB47 393 aaPredicted RBP9.36□□□□□ -0.91
GFM1-202ENST00000312756 NEXNQ0ZGT2 675 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 EPHA10Q5JZY3 1008 aa9.36□□□□□ -0.91
GFM1-202ENST00000312756 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms