RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
USP15-202ENST00000312635 PRR5LQ6MZQ0 368 aa11.24□□□□□ -0.61
USP15-202ENST00000312635 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
USP15-202ENST00000312635 SYNE4Q8N205 404 aa11.24□□□□□ -0.61
USP15-202ENST00000312635 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
USP15-202ENST00000312635 ANKRD18BA2A2Z9 1011 aa11.23□□□□□ -0.61
USP15-202ENST00000312635 HCLS1P14317 486 aaPredicted RBP11.23□□□□□ -0.61
USP15-202ENST00000312635 CHMP3Q9Y3E7 222 aa11.23□□□□□ -0.61
USP15-202ENST00000312635 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
USP15-202ENST00000312635 MMP10P09238 476 aa11.23□□□□□ -0.61
USP15-202ENST00000312635 G3BP1Q13283 466 aaKnown RBP eCLIP11.23□□□□□ -0.61
USP15-202ENST00000312635 ABCC12Q96J65 1359 aa11.22□□□□□ -0.61
USP15-202ENST00000312635 CIAO1O76071 339 aa11.22□□□□□ -0.61
USP15-202ENST00000312635 NUCB1Q02818 461 aa11.22□□□□□ -0.61
USP15-202ENST00000312635 PTPN12Q05209 780 aaKnown RBP11.22□□□□□ -0.61
USP15-202ENST00000312635 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
USP15-202ENST00000312635 NRXN2Q9P2S2 1712 aa11.22□□□□□ -0.61
USP15-202ENST00000312635 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
USP15-202ENST00000312635 ITGA6P23229 1130 aa11.21□□□□□ -0.61
USP15-202ENST00000312635 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.61
USP15-202ENST00000312635 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
USP15-202ENST00000312635 KLRG2A4D1S0 409 aaPredicted RBP11.21□□□□□ -0.62
USP15-202ENST00000312635 FAM161AQ3B820 660 aa11.21□□□□□ -0.62
USP15-202ENST00000312635 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.62
USP15-202ENST00000312635 CDC5LQ99459 802 aaKnown RBP11.21□□□□□ -0.62
USP15-202ENST00000312635 LRRCC1Q9C099 1032 aa11.21□□□□□ -0.62
USP15-202ENST00000312635 MTFR1LQ9H019 292 aa11.21□□□□□ -0.62
USP15-202ENST00000312635 GREM2Q9H772 168 aa11.21□□□□□ -0.62
USP15-202ENST00000312635 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
USP15-202ENST00000312635 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
USP15-202ENST00000312635 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
USP15-202ENST00000312635 CHD1LQ86WJ1 897 aa11.2□□□□□ -0.62
USP15-202ENST00000312635 EYA2O00167 538 aa11.2□□□□□ -0.62
USP15-202ENST00000312635 PDE6BP35913 854 aa11.2□□□□□ -0.62
USP15-202ENST00000312635 IL15P40933 162 aaPredicted RBP11.2□□□□□ -0.62
USP15-202ENST00000312635 EXOC6BQ9Y2D4 811 aa11.2□□□□□ -0.62
USP15-202ENST00000312635 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
USP15-202ENST00000312635 POLD1P28340 1107 aa11.19□□□□□ -0.62
USP15-202ENST00000312635 IGHMBP2P38935 993 aaKnown RBP11.19□□□□□ -0.62
USP15-202ENST00000312635 R3HDM1Q15032 1099 aaKnown RBP11.19□□□□□ -0.62
USP15-202ENST00000312635 CRY2Q49AN0 593 aa11.19□□□□□ -0.62
USP15-202ENST00000312635 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
USP15-202ENST00000312635 PA2G4Q9UQ80 394 aaKnown RBP11.19□□□□□ -0.62
USP15-202ENST00000312635 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
USP15-202ENST00000312635 RBM17Q96I25 401 aaKnown RBP11.19□□□□□ -0.62
USP15-202ENST00000312635 MYH3P11055 1940 aa11.19□□□□□ -0.62
USP15-202ENST00000312635 ANKRD18AQ8IVF6 992 aa11.18□□□□□ -0.62
USP15-202ENST00000312635 RPGRQ92834 1020 aaKnown RBP11.18□□□□□ -0.62
USP15-202ENST00000312635 GPR108Q9NPR9 543 aa11.18□□□□□ -0.62
USP15-202ENST00000312635 LRP5O75197 1615 aa11.18□□□□□ -0.62
USP15-202ENST00000312635 HOXA10P31260 410 aaPredicted RBP11.17□□□□□ -0.62
USP15-202ENST00000312635 LDHAL6AQ6ZMR3 332 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 C3orf67Q6ZVT6 689 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
USP15-202ENST00000312635 CRAMP1Q96RY5 1269 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 MROH5Q6ZUA9 1318 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 ATG9AQ7Z3C6 839 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 TMC4Q7Z404 712 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 CLASRPQ8N2M8 674 aaKnown RBP11.17□□□□□ -0.62
USP15-202ENST00000312635 KLHDC4Q8TBB5 520 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 PDGFDQ9GZP0 370 aaPredicted RBP11.17□□□□□ -0.62
USP15-202ENST00000312635 SIL1Q9H173 461 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 CNNM1Q9NRU3 951 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 BSDC1Q9NW68 430 aaPredicted RBP11.17□□□□□ -0.62
USP15-202ENST00000312635 RIPOR2Q9Y4F9 1068 aa11.17□□□□□ -0.62
USP15-202ENST00000312635 SASH1O94885 1247 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 NPR1P16066 1061 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 RPS8P62241 208 aaKnown RBP11.16□□□□□ -0.62
USP15-202ENST00000312635 GRAPQ13588 217 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 CCDC24Q8N4L8 307 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 GRAPLQ8TC17 118 aaPredicted RBP11.16□□□□□ -0.62
USP15-202ENST00000312635 ZNF594Q96JF6 807 aaPredicted RBP11.16□□□□□ -0.62
USP15-202ENST00000312635 SEC31BQ9NQW1 1179 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 AKAP2Q9Y2D5 859 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 C10orf71Q711Q0 1435 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 TNRC6CQ9HCJ0 1690 aaKnown RBP11.16□□□□□ -0.62
USP15-202ENST00000312635 LNPKQ9C0E8 428 aa11.16□□□□□ -0.62
USP15-202ENST00000312635 EP400Q96L91 3159 aa11.15□□□□□ -0.62
USP15-202ENST00000312635 APBB1O00213 710 aa11.15□□□□□ -0.62
USP15-202ENST00000312635 BBOX1O75936 387 aa11.15□□□□□ -0.62
USP15-202ENST00000312635 ALDH1B1P30837 517 aa11.15□□□□□ -0.62
USP15-202ENST00000312635 LRRC24Q50LG9 513 aa11.15□□□□□ -0.62
USP15-202ENST00000312635 STYK1Q6J9G0 422 aa11.15□□□□□ -0.62
USP15-202ENST00000312635 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
USP15-202ENST00000312635 MASTLQ96GX5 879 aa11.15□□□□□ -0.62
USP15-202ENST00000312635 ZBTB7AO95365 584 aa11.15□□□□□ -0.63
USP15-202ENST00000312635 SRGNP10124 158 aa11.15□□□□□ -0.63
USP15-202ENST00000312635 PUS3Q9BZE2 481 aaKnown RBP11.15□□□□□ -0.63
USP15-202ENST00000312635 H0YIN7 160 aa11.14□□□□□ -0.63
USP15-202ENST00000312635 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
USP15-202ENST00000312635 TFCP2Q12800 502 aa11.14□□□□□ -0.63
USP15-202ENST00000312635 METTL24Q5JXM2 366 aa11.14□□□□□ -0.63
USP15-202ENST00000312635 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
USP15-202ENST00000312635 AOX1Q06278 1338 aa11.14□□□□□ -0.63
USP15-202ENST00000312635 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
USP15-202ENST00000312635 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
USP15-202ENST00000312635 PDE4AP27815 886 aa11.13□□□□□ -0.63
USP15-202ENST00000312635 TNNI3KQ59H18 835 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms