RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PPFIA3O75145 1194 aa15.63■□□□□ 0.09
CLCN6-201ENST00000312413 BMP15O95972 392 aa15.63■□□□□ 0.09
CLCN6-201ENST00000312413 STMN4Q9H169 189 aaPredicted RBP15.63■□□□□ 0.09
CLCN6-201ENST00000312413 TSHZ3Q63HK5 1081 aa15.63■□□□□ 0.09
CLCN6-201ENST00000312413 NBPF11Q86T75 865 aa15.63■□□□□ 0.09
CLCN6-201ENST00000312413 TTF1Q15361 905 aaPredicted RBP15.63■□□□□ 0.09
CLCN6-201ENST00000312413 CCDC77Q9BR77 488 aa15.63■□□□□ 0.09
CLCN6-201ENST00000312413 OGFRQ9NZT2 677 aa15.63■□□□□ 0.09
CLCN6-201ENST00000312413 F13A1P00488 732 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 HAND2P61296 217 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 VPS18Q9P253 973 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 TTC21AQ8NDW8 1320 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 RASAL2Q9UJF2 1139 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 PTCD1O75127 700 aaKnown RBP15.62■□□□□ 0.09
CLCN6-201ENST00000312413 AMOTQ4VCS5 1084 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 SCLT1Q96NL6 688 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 ZNF652Q9Y2D9 606 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLCN6-201ENST00000312413 TUBBP07437 444 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 NBPF7P0C2Y1 421 aaPredicted RBP15.62■□□□□ 0.09
CLCN6-201ENST00000312413 HSP90AA4PQ58FG1 418 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 PPP1R42Q7Z4L9 355 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 TTC14Q96N46 770 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 TSNARE1Q96NA8 513 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 SERPINA10Q9UK55 444 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 TYRO3Q06418 890 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 FERMT2Q96AC1 680 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 EHMT1Q9H9B1 1298 aa15.62■□□□□ 0.09
CLCN6-201ENST00000312413 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
CLCN6-201ENST00000312413 KRT83P78385 493 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 IRX3P78415 501 aaPredicted RBP15.61■□□□□ 0.09
CLCN6-201ENST00000312413 MXRA7P84157 204 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 ARFGAP2Q8N6H7 521 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 IQCGQ9H095 443 aaKnown RBP15.61■□□□□ 0.09
CLCN6-201ENST00000312413 MFSD6Q6ZSS7 791 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 RAB11FIP4Q86YS3 637 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 KRT86O43790 486 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 AFMP43652 599 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 KLF18A0A0U1RQI7 1052 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 CCDC129Q6ZRS4 1044 aa15.61■□□□□ 0.09
CLCN6-201ENST00000312413 PAIP2Q9BPZ3 127 aaKnown RBP15.61■□□□□ 0.09
CLCN6-201ENST00000312413 DNM1Q05193 864 aaKnown RBP15.6■□□□□ 0.09
CLCN6-201ENST00000312413 SYCP3Q8IZU3 236 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 FERMT1Q9BQL6 677 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 KIF5AQ12840 1032 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 DAAM2Q86T65 1068 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 NAIPQ13075 1403 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 PRPHP41219 470 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 TBC1D5Q92609 795 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 COMMD10Q9Y6G5 202 aa15.6■□□□□ 0.09
CLCN6-201ENST00000312413 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
CLCN6-201ENST00000312413 PTGS1P23219 599 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 LMOD1P29536 600 aaPredicted RBP15.59■□□□□ 0.09
CLCN6-201ENST00000312413 RAB3GAP1Q15042 981 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 IL16Q14005 1332 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 ESYT1Q9BSJ8 1104 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 RASSF4Q9H2L5 321 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 PSMA7O14818 248 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 ZC3H6P61129 1189 aaKnown RBP15.59■□□□□ 0.09
CLCN6-201ENST00000312413 ALG1Q9BT22 464 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 C10orf67Q8IYJ2 551 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 RHPN1Q8TCX5 695 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 SREK1Q8WXA9 508 aaKnown RBP15.59■□□□□ 0.09
CLCN6-201ENST00000312413 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 NESP48681 1621 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 TOP2BQ02880 1626 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 IGSF3O75054 1194 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 ARHGAP45Q92619 1136 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 CCDC114Q96M63 670 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 TRMT112Q9UI30 125 aaKnown RBP15.59■□□□□ 0.09
CLCN6-201ENST00000312413 EMILIN1Q9Y6C2 1016 aa15.59■□□□□ 0.09
CLCN6-201ENST00000312413 CCDC160A6NGH7 325 aa15.58■□□□□ 0.09
CLCN6-201ENST00000312413 PHACTR2O75167 634 aa15.58■□□□□ 0.09
CLCN6-201ENST00000312413 SMAP1Q8IYB5 467 aaPredicted RBP15.58■□□□□ 0.09
CLCN6-201ENST00000312413 SNRKQ9NRH2 765 aa15.58■□□□□ 0.09
CLCN6-201ENST00000312413 TSPY2A6NKD2 308 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 STAT6P42226 847 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 SMC6Q96SB8 1091 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 PDE4BQ07343 736 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 CPLX4Q7Z7G2 160 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 SMC5Q8IY18 1101 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 ZEB2O60315 1214 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 TBCAO75347 108 aaKnown RBP15.58■□□□□ 0.08
CLCN6-201ENST00000312413 C8orf34Q49A92 452 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 SYT10Q6XYQ8 523 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 CEP83Q9Y592 693 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 NCOA1Q15788 1441 aa15.58■□□□□ 0.08
CLCN6-201ENST00000312413 PDE1AP54750 535 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 MAP3K2Q9Y2U5 619 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 PCDHB15Q9Y5E8 787 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLCN6-201ENST00000312413 ZBTB43O43298 467 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 ZBTB16Q05516 673 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 CCDC174Q6PII3 467 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 RBM8AQ9Y5S9 174 aaKnown RBP15.57■□□□□ 0.08
CLCN6-201ENST00000312413 RTL1A6NKG5 1358 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 NME9Q86XW9 330 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 SLF2Q8IX21 1173 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 PUF60Q9UHX1 559 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms