RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TXNDC2Q86VQ3 553 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 CCDC50Q8IVM0 306 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 MTRF1LQ9UGC7 380 aaKnown RBP17.6■□□□□ 0.41
HCFC1-201ENST00000310441 EIF2AK4Q9P2K8 1649 aaKnown RBP17.6■□□□□ 0.41
HCFC1-201ENST00000310441 N4BP3O15049 544 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 DDX54Q8TDD1 881 aaKnown RBP17.6■□□□□ 0.41
HCFC1-201ENST00000310441 VCX3BQ9H321 246 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 HAUS2Q9NVX0 235 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 STAT6P42226 847 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 CFAP157Q5JU67 520 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 SPAG5Q96R06 1193 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 SAMM50Q9Y512 469 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 UBASH3AP57075 661 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 LACTBP83111 547 aaPredicted RBP17.6■□□□□ 0.41
HCFC1-201ENST00000310441 STMN2Q93045 179 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 NSD3Q9BZ95 1437 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 ATP11AP98196 1134 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 FAM69CQ0P6D2 419 aa17.6■□□□□ 0.41
HCFC1-201ENST00000310441 PAIP2Q9BPZ3 127 aaKnown RBP17.6■□□□□ 0.41
HCFC1-201ENST00000310441 LDHCP07864 332 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 CNNM2Q9H8M5 875 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 IARSP41252 1262 aaKnown RBP17.59■□□□□ 0.41
HCFC1-201ENST00000310441 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
HCFC1-201ENST00000310441 GSTA5Q7RTV2 222 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 KAT14Q9H8E8 782 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 TRMT1Q9NXH9 659 aaKnown RBP17.59■□□□□ 0.41
HCFC1-201ENST00000310441 NSD2O96028 1365 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 CIB2O75838 187 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 OTUD6BQ8N6M0 293 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 KRT23Q9C075 422 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 TMOD3Q9NYL9 352 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 CLUL1Q15846 466 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 AFAP1L2Q8N4X5 818 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 CSRNP2Q9H175 543 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 SYKP43405 635 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 METAP2P50579 478 aaKnown RBP eCLIP17.59■□□□□ 0.417e-7■■■■□ 22.1
HCFC1-201ENST00000310441 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
HCFC1-201ENST00000310441 PSMA7O14818 248 aa17.58■□□□□ 0.41
HCFC1-201ENST00000310441 GPR161Q8N6U8 529 aaKnown RBP17.58■□□□□ 0.41
HCFC1-201ENST00000310441 MYO1BO43795 1136 aa17.58■□□□□ 0.41
HCFC1-201ENST00000310441 PSMD1Q99460 953 aa17.58■□□□□ 0.4
HCFC1-201ENST00000310441 TTC31Q49AM3 519 aaPredicted RBP17.58■□□□□ 0.4
HCFC1-201ENST00000310441 VCXQ9H320 206 aa17.58■□□□□ 0.4
HCFC1-201ENST00000310441 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
HCFC1-201ENST00000310441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.58■□□□□ 0.46e-8■■■□□ 17.2
HCFC1-201ENST00000310441 VAV2P52735 878 aa17.58■□□□□ 0.4
HCFC1-201ENST00000310441 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
HCFC1-201ENST00000310441 SH2D4BQ5SQS7 431 aa17.58■□□□□ 0.4
HCFC1-201ENST00000310441 NCOA7Q8NI08 942 aa17.58■□□□□ 0.4
HCFC1-201ENST00000310441 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
HCFC1-201ENST00000310441 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 CACNA2D3Q8IZS8 1091 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 CCDC63Q8NA47 563 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 KLHL40Q2TBA0 621 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 MAP7Q14244 749 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 GNAQP50148 359 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
HCFC1-201ENST00000310441 AK9Q5TCS8 1911 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 HS1BP3Q53T59 392 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 C10orf67Q8IYJ2 551 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 MIPOL1Q8TD10 442 aa17.57■□□□□ 0.4
HCFC1-201ENST00000310441 RBM25P49756 843 aaKnown RBP17.57■□□□□ 0.4
HCFC1-201ENST00000310441 LUC7L2Q9Y383 392 aaKnown RBP17.56■□□□□ 0.4
HCFC1-201ENST00000310441 A0A1B0GUA9 196 aa17.56■□□□□ 0.4
HCFC1-201ENST00000310441 TMPOP42166 694 aaKnown RBP17.56■□□□□ 0.4
HCFC1-201ENST00000310441 CFTRP13569 1480 aa17.56■□□□□ 0.4
HCFC1-201ENST00000310441 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
HCFC1-201ENST00000310441 XPCQ01831 940 aaPredicted RBP17.56■□□□□ 0.4
HCFC1-201ENST00000310441 TAF7Q15545 349 aaPredicted RBP17.56■□□□□ 0.4
HCFC1-201ENST00000310441 PPFIBP2Q8ND30 876 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 CPLX4Q7Z7G2 160 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 GBP1P32455 592 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 IL1RAPL2Q9NP60 686 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.55■□□□□ 0.4
HCFC1-201ENST00000310441 ATRIPQ8WXE1 791 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 CABP5Q9NP86 173 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 CROCCP2Q86T23 111 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 PRPF31Q8WWY3 499 aaKnown RBP17.55■□□□□ 0.4
HCFC1-201ENST00000310441 GJB2P29033 226 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 TUBB2AQ13885 445 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 TNPO1Q92973 898 aaKnown RBP17.55■□□□□ 0.4
HCFC1-201ENST00000310441 TUBB2BQ9BVA1 445 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 MTUS1Q9ULD2 1270 aa17.55■□□□□ 0.4
HCFC1-201ENST00000310441 IDEP14735 1019 aa17.54■□□□□ 0.4
HCFC1-201ENST00000310441 LRPPRCP42704 1394 aaKnown RBP17.54■□□□□ 0.4
HCFC1-201ENST00000310441 SARNPP82979 210 aaKnown RBP17.54■□□□□ 0.4
HCFC1-201ENST00000310441 PRDM10Q9NQV6 1147 aa17.54■□□□□ 0.4
HCFC1-201ENST00000310441 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
HCFC1-201ENST00000310441 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
HCFC1-201ENST00000310441 CPLX3Q8WVH0 158 aa17.54■□□□□ 0.4
HCFC1-201ENST00000310441 TBC1D31Q96DN5 1066 aa17.54■□□□□ 0.4
HCFC1-201ENST00000310441 VIMP08670 466 aaKnown RBP17.54■□□□□ 0.4
HCFC1-201ENST00000310441 TTC21BQ7Z4L5 1316 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms