RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 BECN1Q14457 450 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 TNNI3KQ59H18 835 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 FPGT-TNNI3KV9GXZ4 949 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 HELBQ8NG08 1087 aaPredicted RBP13.54□□□□□ -0.24
TRIM59-201ENST00000309784 CNTNAP4Q9C0A0 1308 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 REC8O95072 547 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
TRIM59-201ENST00000309784 KCNJ4P48050 445 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 DBNDD2Q9BQY9 259 aa13.54□□□□□ -0.24
TRIM59-201ENST00000309784 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 TBC1D9BQ66K14 1250 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
TRIM59-201ENST00000309784 PAPPAQ13219 1627 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
TRIM59-201ENST00000309784 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
TRIM59-201ENST00000309784 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 NARFQ9UHQ1 456 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
TRIM59-201ENST00000309784 RFX5P48382 616 aaPredicted RBP13.52□□□□□ -0.24
TRIM59-201ENST00000309784 TPTE2Q6XPS3 522 aa13.52□□□□□ -0.24
TRIM59-201ENST00000309784 LRRC4BQ9NT99 713 aa13.52□□□□□ -0.24
TRIM59-201ENST00000309784 OSBPL3Q9H4L5 887 aa13.52□□□□□ -0.25
TRIM59-201ENST00000309784 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.25
TRIM59-201ENST00000309784 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
TRIM59-201ENST00000309784 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.25
TRIM59-201ENST00000309784 TTC39AQ5SRH9 613 aa13.52□□□□□ -0.25
TRIM59-201ENST00000309784 RC3H1Q5TC82 1133 aaKnown RBP13.52□□□□□ -0.25
TRIM59-201ENST00000309784 CLEC4GQ6UXB4 293 aa13.52□□□□□ -0.25
TRIM59-201ENST00000309784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.25
TRIM59-201ENST00000309784 FKBP4Q02790 459 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRIM59-201ENST00000309784 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
TRIM59-201ENST00000309784 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
TRIM59-201ENST00000309784 STAP2Q9UGK3 403 aa13.51□□□□□ -0.25
TRIM59-201ENST00000309784 AKAP2Q9Y2D5 859 aa13.51□□□□□ -0.25
TRIM59-201ENST00000309784 CDHR2Q9BYE9 1310 aa13.51□□□□□ -0.25
TRIM59-201ENST00000309784 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
TRIM59-201ENST00000309784 MCCP23508 829 aa13.5□□□□□ -0.25
TRIM59-201ENST00000309784 TBC1D32Q96NH3 1257 aa13.5□□□□□ -0.25
TRIM59-201ENST00000309784 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
TRIM59-201ENST00000309784 SNRKQ9NRH2 765 aa13.5□□□□□ -0.25
TRIM59-201ENST00000309784 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
TRIM59-201ENST00000309784 POTEAQ6S8J7 498 aa13.5□□□□□ -0.25
TRIM59-201ENST00000309784 ATP2B3Q16720 1220 aa13.5□□□□□ -0.25
TRIM59-201ENST00000309784 EDC3Q96F86 508 aaKnown RBP13.5□□□□□ -0.25
TRIM59-201ENST00000309784 IFIT1P09914 478 aaKnown RBP13.49□□□□□ -0.25
TRIM59-201ENST00000309784 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
TRIM59-201ENST00000309784 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
TRIM59-201ENST00000309784 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
TRIM59-201ENST00000309784 SLC27A3Q5K4L6 730 aa13.49□□□□□ -0.25
TRIM59-201ENST00000309784 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
TRIM59-201ENST00000309784 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
TRIM59-201ENST00000309784 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
TRIM59-201ENST00000309784 TAF5LO75529 589 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 ATG9AQ7Z3C6 839 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.48□□□□□ -0.25
TRIM59-201ENST00000309784 AOX1Q06278 1338 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 GOLIM4O00461 696 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 NTSR2O95665 410 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 CHMLP26374 656 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 ANKRD18AQ8IVF6 992 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 EVI5LQ96CN4 794 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 PLA2G12BQ9BX93 195 aa13.48□□□□□ -0.25
TRIM59-201ENST00000309784 CSF1RP07333 972 aa13.47□□□□□ -0.25
TRIM59-201ENST00000309784 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
TRIM59-201ENST00000309784 VPS37DQ86XT2 251 aa13.47□□□□□ -0.25
TRIM59-201ENST00000309784 ESYT1Q9BSJ8 1104 aa13.47□□□□□ -0.25
TRIM59-201ENST00000309784 SLKQ9H2G2 1235 aaPredicted RBP13.47□□□□□ -0.25
TRIM59-201ENST00000309784 BTAF1O14981 1849 aa13.47□□□□□ -0.25
TRIM59-201ENST00000309784 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
TRIM59-201ENST00000309784 XAGE2Q96GT9 111 aa13.46□□□□□ -0.25
TRIM59-201ENST00000309784 THSD7AQ9UPZ6 1657 aa13.46□□□□□ -0.25
TRIM59-201ENST00000309784 CIAO1O76071 339 aa13.46□□□□□ -0.25
TRIM59-201ENST00000309784 TJP1Q07157 1748 aa13.46□□□□□ -0.25
TRIM59-201ENST00000309784 ADORA1P30542 326 aa13.46□□□□□ -0.26
TRIM59-201ENST00000309784 HMGB2P26583 209 aaKnown RBP13.45□□□□□ -0.26
TRIM59-201ENST00000309784 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
TRIM59-201ENST00000309784 NOL8Q76FK4 1167 aaKnown RBP13.45□□□□□ -0.26
TRIM59-201ENST00000309784 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
TRIM59-201ENST00000309784 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
TRIM59-201ENST00000309784 SNAP23O00161 211 aa13.45□□□□□ -0.26
TRIM59-201ENST00000309784 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
TRIM59-201ENST00000309784 NFIXQ14938 502 aa13.45□□□□□ -0.26
TRIM59-201ENST00000309784 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
TRIM59-201ENST00000309784 EP400Q96L91 3159 aa13.45□□□□□ -0.26
TRIM59-201ENST00000309784 SLC5A1P13866 664 aa13.44□□□□□ -0.26
TRIM59-201ENST00000309784 ST5P78524 1137 aa13.44□□□□□ -0.26
TRIM59-201ENST00000309784 RPGRQ92834 1020 aaKnown RBP13.44□□□□□ -0.26
TRIM59-201ENST00000309784 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
TRIM59-201ENST00000309784 HIP1O00291 1037 aa13.44□□□□□ -0.26
TRIM59-201ENST00000309784 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
TRIM59-201ENST00000309784 ADRA2BP18089 450 aa13.44□□□□□ -0.26
TRIM59-201ENST00000309784 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms