RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 IFIT5Q13325 482 aaKnown RBP25.76■■□□□ 1.72
ATG4D-201ENST00000309469 RAD50Q92878 1312 aa25.76■■□□□ 1.71
ATG4D-201ENST00000309469 HSPA4P34932 840 aa25.76■■□□□ 1.71
ATG4D-201ENST00000309469 CCDC85AQ96PX6 553 aaPredicted RBP25.76■■□□□ 1.71
ATG4D-201ENST00000309469 CAMTA2O94983 1202 aa25.75■■□□□ 1.71
ATG4D-201ENST00000309469 TTLL11Q8NHH1 800 aa25.75■■□□□ 1.71
ATG4D-201ENST00000309469 NUP98P52948 1817 aa25.75■■□□□ 1.71
ATG4D-201ENST00000309469 DDIT3P35638 169 aa25.75■■□□□ 1.71
ATG4D-201ENST00000309469 GJD4Q96KN9 370 aaPredicted RBP25.75■■□□□ 1.71
ATG4D-201ENST00000309469 NEUROD6Q96NK8 337 aa25.75■■□□□ 1.71
ATG4D-201ENST00000309469 FSD1Q9BTV5 496 aa25.75■■□□□ 1.71
ATG4D-201ENST00000309469 CTSWP56202 376 aa25.74■■□□□ 1.71
ATG4D-201ENST00000309469 TIMM10P62072 90 aa25.74■■□□□ 1.71
ATG4D-201ENST00000309469 TAF7LQ5H9L4 462 aa25.74■■□□□ 1.71
ATG4D-201ENST00000309469 CEP126Q9P2H0 1117 aa25.74■■□□□ 1.71
ATG4D-201ENST00000309469 THSD7AQ9UPZ6 1657 aa25.74■■□□□ 1.71
ATG4D-201ENST00000309469 HSP90AA1P07900 732 aaKnown RBP25.73■■□□□ 1.71
ATG4D-201ENST00000309469 PDE8AO60658 829 aa25.73■■□□□ 1.71
ATG4D-201ENST00000309469 PTF1AQ7RTS3 328 aa25.73■■□□□ 1.71
ATG4D-201ENST00000309469 HAUS7Q99871 368 aa25.73■■□□□ 1.71
ATG4D-201ENST00000309469 FRAT2O75474 233 aaPredicted RBP25.72■■□□□ 1.71
ATG4D-201ENST00000309469 LINC00116Q8NCU8 138 aa25.72■■□□□ 1.71
ATG4D-201ENST00000309469 GREM2Q9H772 168 aa25.72■■□□□ 1.71
ATG4D-201ENST00000309469 AFF2P51816 1311 aa25.72■■□□□ 1.71
ATG4D-201ENST00000309469 ZNF831Q5JPB2 1677 aa25.71■■□□□ 1.71
ATG4D-201ENST00000309469 NEK4P51957 841 aa25.71■■□□□ 1.71
ATG4D-201ENST00000309469 NMIQ13287 307 aaPredicted RBP25.71■■□□□ 1.71
ATG4D-201ENST00000309469 SUSD4Q5VX71 490 aa25.71■■□□□ 1.71
ATG4D-201ENST00000309469 ZNF609O15014 1411 aa25.71■■□□□ 1.71
ATG4D-201ENST00000309469 ITGA6P23229 1130 aa25.71■■□□□ 1.71
ATG4D-201ENST00000309469 EDC3Q96F86 508 aaKnown RBP25.71■■□□□ 1.71
ATG4D-201ENST00000309469 FAM227BQ96M60 508 aa25.71■■□□□ 1.71
ATG4D-201ENST00000309469 A0A1B0GUL7 405 aa25.7■■□□□ 1.7
ATG4D-201ENST00000309469 ANKRD18BA2A2Z9 1011 aa25.7■■□□□ 1.7
ATG4D-201ENST00000309469 PARP10Q53GL7 1025 aa25.7■■□□□ 1.7
ATG4D-201ENST00000309469 AK7Q96M32 723 aa25.7■■□□□ 1.7
ATG4D-201ENST00000309469 SNRKQ9NRH2 765 aa25.7■■□□□ 1.7
ATG4D-201ENST00000309469 CIZ1Q9ULV3 898 aaPredicted RBP25.69■■□□□ 1.7
ATG4D-201ENST00000309469 AKAP2Q9Y2D5 859 aa25.69■■□□□ 1.7
ATG4D-201ENST00000309469 DNAJC2Q99543 621 aaKnown RBP25.69■■□□□ 1.7
ATG4D-201ENST00000309469 UTP14AQ9BVJ6 771 aaKnown RBP25.69■■□□□ 1.7
ATG4D-201ENST00000309469 MYH14Q7Z406 1995 aaKnown RBP25.69■■□□□ 1.7
ATG4D-201ENST00000309469 COL5A3P25940 1745 aaPredicted RBP25.68■■□□□ 1.7
ATG4D-201ENST00000309469 FOXD4L1Q9NU39 408 aa25.68■■□□□ 1.7
ATG4D-201ENST00000309469 SH3TC1Q8TE82 1336 aa25.68■■□□□ 1.7
ATG4D-201ENST00000309469 PTH1RQ03431 593 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 RIPOR2Q9Y4F9 1068 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 CNTNAP4Q9C0A0 1308 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 ONECUT3O60422 494 aaPredicted RBP25.67■■□□□ 1.7
ATG4D-201ENST00000309469 KCNQ4P56696 695 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 FAM182BQ5T319 152 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 LDHAL6AQ6ZMR3 332 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 SNX14Q9Y5W7 946 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 NDUFB9Q9Y6M9 179 aa25.67■■□□□ 1.7
ATG4D-201ENST00000309469 RFX7Q2KHR2 1363 aa25.66■■□□□ 1.7
ATG4D-201ENST00000309469 A0A0D9SFI3 127 aa25.66■■□□□ 1.7
ATG4D-201ENST00000309469 MCM2P49736 904 aa25.66■■□□□ 1.7
ATG4D-201ENST00000309469 IL27Q8NEV9 243 aa25.66■■□□□ 1.7
ATG4D-201ENST00000309469 TRPC5Q9UL62 973 aaPredicted RBP25.66■■□□□ 1.7
ATG4D-201ENST00000309469 NIP7Q9Y221 180 aaKnown RBP eCLIP25.66■■□□□ 1.7
ATG4D-201ENST00000309469 ZNF652Q9Y2D9 606 aa25.66■■□□□ 1.7
ATG4D-201ENST00000309469 CCDC171Q6TFL3 1326 aa25.65■■□□□ 1.7
ATG4D-201ENST00000309469 ATRNO75882 1429 aa25.65■■□□□ 1.7
ATG4D-201ENST00000309469 FAM177BA6PVY3 158 aa25.65■■□□□ 1.7
ATG4D-201ENST00000309469 HCLS1P14317 486 aaPredicted RBP25.64■■□□□ 1.69
ATG4D-201ENST00000309469 CLEC4GQ6UXB4 293 aa25.64■■□□□ 1.69
ATG4D-201ENST00000309469 METTL24Q5JXM2 366 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 RC3H1Q5TC82 1133 aaKnown RBP25.63■■□□□ 1.69
ATG4D-201ENST00000309469 DDX46Q7L014 1031 aaKnown RBP25.63■■□□□ 1.69
ATG4D-201ENST00000309469 RASEFQ8IZ41 740 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 KBTBD3Q8NAB2 608 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.63■■□□□ 1.69
ATG4D-201ENST00000309469 CNNM1Q9NRU3 951 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 MED23Q9ULK4 1368 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 NHSQ6T4R5 1651 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 DEKP35659 375 aaKnown RBP25.63■■□□□ 1.69
ATG4D-201ENST00000309469 MAP4K1Q92918 833 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 XAGE2Q96GT9 111 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 PAG1Q9NWQ8 432 aa25.63■■□□□ 1.69
ATG4D-201ENST00000309469 RIC1Q4ADV7 1423 aa25.62■■□□□ 1.69
ATG4D-201ENST00000309469 NTSR2O95665 410 aa25.62■■□□□ 1.69
ATG4D-201ENST00000309469 IFIT1P09914 478 aaKnown RBP25.62■■□□□ 1.69
ATG4D-201ENST00000309469 CCDC158Q5M9N0 1113 aa25.62■■□□□ 1.69
ATG4D-201ENST00000309469 KCNB2Q92953 911 aa25.62■■□□□ 1.69
ATG4D-201ENST00000309469 UPF3BQ9BZI7 483 aaKnown RBP25.62■■□□□ 1.69
ATG4D-201ENST00000309469 HSP90B1P14625 803 aaKnown RBP25.61■■□□□ 1.69
ATG4D-201ENST00000309469 NECTIN1Q15223 517 aa25.61■■□□□ 1.69
ATG4D-201ENST00000309469 SEPT12Q8IYM1 358 aa25.61■■□□□ 1.69
ATG4D-201ENST00000309469 GOLIM4O00461 696 aa25.61■■□□□ 1.69
ATG4D-201ENST00000309469 ADORA1P30542 326 aa25.61■■□□□ 1.69
ATG4D-201ENST00000309469 GORABQ5T7V8 394 aa25.61■■□□□ 1.69
ATG4D-201ENST00000309469 TICAM2Q86XR7 235 aa25.61■■□□□ 1.69
ATG4D-201ENST00000309469 PRPF40BQ6NWY9 871 aaKnown RBP25.6■■□□□ 1.69
ATG4D-201ENST00000309469 RBM8AQ9Y5S9 174 aaKnown RBP25.6■■□□□ 1.69
ATG4D-201ENST00000309469 BTAF1O14981 1849 aa25.6■■□□□ 1.69
ATG4D-201ENST00000309469 MYH3P11055 1940 aa25.59■■□□□ 1.69
ATG4D-201ENST00000309469 RGL2O15211 777 aa25.59■■□□□ 1.69
ATG4D-201ENST00000309469 ATP2B3Q16720 1220 aa25.59■■□□□ 1.69
ATG4D-201ENST00000309469 TMX3Q96JJ7 454 aa25.59■■□□□ 1.69
ATG4D-201ENST00000309469 CCNL1Q9UK58 526 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms