RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 TTLL11Q8NHH1 800 aa27.91■■■□□ 2.06
SNUPN-201ENST00000308588 ARFGEF1Q9Y6D6 1849 aa27.9■■■□□ 2.06
SNUPN-201ENST00000308588 GRIN3BO60391 1043 aa27.9■■■□□ 2.06
SNUPN-201ENST00000308588 DDX46Q7L014 1031 aaKnown RBP27.9■■■□□ 2.06
SNUPN-201ENST00000308588 CCDC152Q4G0S7 254 aa27.89■■■□□ 2.06
SNUPN-201ENST00000308588 C7orf43Q8WVR3 580 aa27.89■■■□□ 2.06
SNUPN-201ENST00000308588 CACNA1SQ13698 1873 aa27.89■■■□□ 2.05
SNUPN-201ENST00000308588 RLBP1P12271 317 aa27.88■■■□□ 2.05
SNUPN-201ENST00000308588 FOXO4P98177 505 aa27.88■■■□□ 2.05
SNUPN-201ENST00000308588 DZIP1LQ8IYY4 767 aaKnown RBP27.88■■■□□ 2.05
SNUPN-201ENST00000308588 TMEM57Q8N5G2 664 aa27.88■■■□□ 2.05
SNUPN-201ENST00000308588 KAZALD1Q96I82 304 aa27.88■■■□□ 2.05
SNUPN-201ENST00000308588 CCDC85AQ96PX6 553 aaPredicted RBP27.88■■■□□ 2.05
SNUPN-201ENST00000308588 C21orf2O43822 256 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 PLIN1O60240 522 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 CSF1RP07333 972 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 EPHA10Q5JZY3 1008 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 SUCLG2Q96I99 432 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 ZNF219Q9P2Y4 722 aaPredicted RBP27.87■■■□□ 2.05
SNUPN-201ENST00000308588 GRAPQ13588 217 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 GRAPLQ8TC17 118 aaPredicted RBP27.87■■■□□ 2.05
SNUPN-201ENST00000308588 SEC31BQ9NQW1 1179 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 MYH3P11055 1940 aa27.87■■■□□ 2.05
SNUPN-201ENST00000308588 TAF1P21675 1872 aa27.86■■■□□ 2.05
SNUPN-201ENST00000308588 FTSJ3Q8IY81 847 aaKnown RBP27.86■■■□□ 2.05
SNUPN-201ENST00000308588 CELF1Q92879 486 aaKnown RBP27.85■■■□□ 2.05
SNUPN-201ENST00000308588 GREM2Q9H772 168 aa27.85■■■□□ 2.05
SNUPN-201ENST00000308588 COL4A1P02462 1669 aa27.84■■■□□ 2.05
SNUPN-201ENST00000308588 BBOX1O75936 387 aa27.84■■■□□ 2.05
SNUPN-201ENST00000308588 OLFM4Q6UX06 510 aa27.84■■■□□ 2.05
SNUPN-201ENST00000308588 MEIS3Q99687 375 aa27.84■■■□□ 2.05
SNUPN-201ENST00000308588 PPEF1O14829 653 aaPredicted RBP27.83■■■□□ 2.05
SNUPN-201ENST00000308588 SLC51AQ86UW1 340 aa27.83■■■□□ 2.05
SNUPN-201ENST00000308588 PANK1Q8TE04 598 aa27.83■■■□□ 2.05
SNUPN-201ENST00000308588 RTL9Q8NET4 1388 aa27.83■■■□□ 2.05
SNUPN-201ENST00000308588 LMBR1LQ6UX01 489 aa27.82■■■□□ 2.04
SNUPN-201ENST00000308588 ARHGAP27Q6ZUM4 889 aa27.82■■■□□ 2.04
SNUPN-201ENST00000308588 UBTFL1P0CB47 393 aaPredicted RBP27.81■■■□□ 2.04
SNUPN-201ENST00000308588 RPS8P62241 208 aaKnown RBP27.81■■■□□ 2.04
SNUPN-201ENST00000308588 FAM161AQ3B820 660 aa27.81■■■□□ 2.04
SNUPN-201ENST00000308588 BICC1Q9H694 974 aaKnown RBP27.81■■■□□ 2.04
SNUPN-201ENST00000308588 MS4A1P11836 297 aa27.8■■■□□ 2.04
SNUPN-201ENST00000308588 SOGA3Q5TF21 947 aa27.8■■■□□ 2.04
SNUPN-201ENST00000308588 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.8■■■□□ 2.04
SNUPN-201ENST00000308588 ATP6V0A2Q9Y487 856 aa27.8■■■□□ 2.04
SNUPN-201ENST00000308588 ITGA6P23229 1130 aa27.79■■■□□ 2.04
SNUPN-201ENST00000308588 RABL6Q3YEC7 729 aaPredicted RBP27.79■■■□□ 2.04
SNUPN-201ENST00000308588 ANKRD44Q8N8A2 993 aa27.79■■■□□ 2.04
SNUPN-201ENST00000308588 CCDC93Q567U6 631 aa27.78■■■□□ 2.04
SNUPN-201ENST00000308588 ITPRIPQ8IWB1 547 aa27.78■■■□□ 2.04
SNUPN-201ENST00000308588 SP8Q8IXZ3 490 aa27.78■■■□□ 2.04
SNUPN-201ENST00000308588 SNED1Q8TER0 1413 aa27.78■■■□□ 2.04
SNUPN-201ENST00000308588 NFKBIEO00221 500 aa27.77■■■□□ 2.04
SNUPN-201ENST00000308588 GNAI3P08754 354 aa27.77■■■□□ 2.04
SNUPN-201ENST00000308588 CC2D2BQ6DHV5 1058 aa27.77■■■□□ 2.04
SNUPN-201ENST00000308588 TMC4Q7Z404 712 aa27.77■■■□□ 2.04
SNUPN-201ENST00000308588 CDC5LQ99459 802 aaKnown RBP27.77■■■□□ 2.04
SNUPN-201ENST00000308588 CHMP3Q9Y3E7 222 aa27.77■■■□□ 2.04
SNUPN-201ENST00000308588 C20orf194Q5TEA3 1177 aa27.77■■■□□ 2.04
SNUPN-201ENST00000308588 ANKRD18AQ8IVF6 992 aa27.77■■■□□ 2.04
SNUPN-201ENST00000308588 LRRFIP2Q9Y608 721 aaKnown RBP27.76■■■□□ 2.03
SNUPN-201ENST00000308588 FER1L6Q2WGJ9 1857 aa27.75■■■□□ 2.03
SNUPN-201ENST00000308588 ZBTB7BO15156 539 aaPredicted RBP27.75■■■□□ 2.03
SNUPN-201ENST00000308588 IFIT5Q13325 482 aaKnown RBP27.75■■■□□ 2.03
SNUPN-201ENST00000308588 PDE3AQ14432 1141 aa27.75■■■□□ 2.03
SNUPN-201ENST00000308588 RTKN2Q8IZC4 609 aa27.75■■■□□ 2.03
SNUPN-201ENST00000308588 ANKRD18BA2A2Z9 1011 aa27.74■■■□□ 2.03
SNUPN-201ENST00000308588 RASSF7Q02833 373 aa27.74■■■□□ 2.03
SNUPN-201ENST00000308588 HDAC5Q9UQL6 1122 aa27.74■■■□□ 2.03
SNUPN-201ENST00000308588 RRP1P56182 461 aaKnown RBP27.73■■■□□ 2.03
SNUPN-201ENST00000308588 COG6Q9Y2V7 657 aa27.73■■■□□ 2.03
SNUPN-201ENST00000308588 PRELPP51888 382 aa27.72■■■□□ 2.03
SNUPN-201ENST00000308588 CCDC57Q2TAC2 916 aa27.72■■■□□ 2.03
SNUPN-201ENST00000308588 TMX4Q9H1E5 349 aaPredicted RBP27.72■■■□□ 2.03
SNUPN-201ENST00000308588 MVPQ14764 893 aaKnown RBP27.72■■■□□ 2.03
SNUPN-201ENST00000308588 GRIPAP1Q4V328 841 aa27.72■■■□□ 2.03
SNUPN-201ENST00000308588 TAOK3Q9H2K8 898 aa27.72■■■□□ 2.03
SNUPN-201ENST00000308588 LTBP3Q9NS15 1303 aa27.72■■■□□ 2.03
SNUPN-201ENST00000308588 BSDC1Q9NW68 430 aaPredicted RBP27.72■■■□□ 2.03
SNUPN-201ENST00000308588 LRRC37AA6NMS7 1700 aa27.71■■■□□ 2.03
SNUPN-201ENST00000308588 IGHMBP2P38935 993 aaKnown RBP27.71■■■□□ 2.03
SNUPN-201ENST00000308588 GNAI2P04899 355 aa27.7■■■□□ 2.02
SNUPN-201ENST00000308588 FKBP4Q02790 459 aaKnown RBP eCLIP27.7■■■□□ 2.02
SNUPN-201ENST00000308588 ZNF594Q96JF6 807 aaPredicted RBP27.69■■■□□ 2.02
SNUPN-201ENST00000308588 PSMD1Q99460 953 aa27.69■■■□□ 2.02
SNUPN-201ENST00000308588 MPNDQ8N594 471 aa27.68■■■□□ 2.02
SNUPN-201ENST00000308588 MPHOSPH8Q99549 860 aa27.68■■■□□ 2.02
SNUPN-201ENST00000308588 CHD4Q14839 1912 aa27.68■■■□□ 2.02
SNUPN-201ENST00000308588 MINPP1Q9UNW1 487 aa27.67■■■□□ 2.02
SNUPN-201ENST00000308588 SBF1O95248 1867 aa27.67■■■□□ 2.02
SNUPN-201ENST00000308588 LMNB1P20700 586 aa27.67■■■□□ 2.02
SNUPN-201ENST00000308588 GPSM2P81274 684 aa27.67■■■□□ 2.02
SNUPN-201ENST00000308588 DPP8Q6V1X1 898 aaPredicted RBP27.67■■■□□ 2.02
SNUPN-201ENST00000308588 DDX19BQ9UMR2 479 aa27.67■■■□□ 2.02
SNUPN-201ENST00000308588 NSFL1CQ9UNZ2 370 aaKnown RBP27.67■■■□□ 2.02
SNUPN-201ENST00000308588 SPEF2Q9C093 1822 aa27.66■■■□□ 2.02
SNUPN-201ENST00000308588 RFX5P48382 616 aaPredicted RBP27.66■■■□□ 2.02
SNUPN-201ENST00000308588 TAF7LQ5H9L4 462 aa27.66■■■□□ 2.02
SNUPN-201ENST00000308588 RTFDC1Q9BY42 306 aaPredicted RBP27.66■■■□□ 2.02
SNUPN-201ENST00000308588 ZNF277Q9NRM2 450 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms